These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3917#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3398 fasta sequence [TCAATCCCTCTCTCCATCTGGTGCTCTCTATCTGAGGAATCCGAATCCGATCAGGGGAGGCGAGGCGCGGCGGTGATCGGCGATGACGGACACGACGGATGACATCGCGGAGGGGATATCATTCCAGGCGTTCGAGGACGACTGCCGGCTGCTGGGCAGCCTCCTCCACGACGTCCTCCTCCGCGAGCTCGGCCCCCGCTTCATCCACCTCCTCGAGCGCATCACCATCCTCGCCCAGAGCGCCGTCAACATGCGCTCCGCCGGGGTGGAGGACACCGCCGTCGTCGTCGAGAAGCAGCTCGGCGCCGAGCT-GGCCGCCATGTCGCTCGAGGACTCGCTCTGCCTCGCCCGCGCCTTCTCCCACCACCTCAACCTCATGACCATCGCCGACACTTACCACAGGGTTCGTAAAGCACGCAATTTCGCCGACCTGTCGAAATCATGTGATGATACATTTGCCAAATTGATTCAAAGTGGTGTTAGCCCGGAAGAACTCTATGACACTGTATGCAAGCAGGAGGTTGAAATTGTTCTGACAGCTCATCCAACTCAAATCAATCGGCGGACTTTGCAGTACAAACACCTTAGAATAGCTCACCTTTTGGAATTCAACGAACGTGCTGATCTTAGCCTCGAGGATAAAGAAATTCTAATTGAAGATCTGGTAAGAGAAATCACGGCAATATGGCAGACTGATGAGTTGAGGCGCCATAAACCTACACCTGTTGACGAAGCTAGAGCTGGCCTTCATATTGTTGAGCAATCGCTCTGGAAAGCAATACCACACTATCTTCGCCGTGTTAGCAATGCTCTAAAGAAGAACACTGGCAAGCCACTTCCGCTCACCTGCACACCAATCAAATTCGGTTCATGGATGGGTGGTGACCGTGATGGGAATCCTAATGTCACAGCAAAAGTTACTAGGGATGTTTCCATTTTGTCCCAATGGATGGCAATTGATCTGTACATCCGGGAACTAGACACTCTAAGCTTTGAGCTATCAATTAACAGATGCAGCGAGAAGCTTGCAAACTTAGCAAATGACATCCTGCTCAAAGAATCAGCATCAGAGGACCAGAAGACCAATACCTGGAATCAAACTGGACCCCAGAACAATCTAAAGCTTCAGCACAGCTTGGCCCTTCCTGCACAGCTTCCTTCTGGTGCTGATCTTCCATCATGTACAGAATGCAACGATGGGGAATCTCAAATCAGAATGTCAAAACTTCCAGGGAATCCAAAGCATAAGTTGGCTCTAAACATAACAGAAAAACGTGAAGACAGTCCATTGCCGTCTCCTAGTCATCGCCCGATGGGTCGAACTCCAAGTGGAGATCAACTAAGGAAGATGTTCACAGAATCCCAAATTGGTCGATCGAGCTTCCGGAAACTTCTAGAACCAAGCATATCAGAGAGACCAGGGAGTACTCCTTATAGAGTTGTCCTTGGTGATGTGAAAGAAAAGCTGATGAACACACGGAGACGACTCGAGCTTCTTCTTGAGGATCTACCATGTGATCGTGATACTTCAGAATATTATGATACATCGGATAAACTTTTGGAGCCCTTGCTTTTGTGTTATCAATCACTGCAATCATGTGGATCTAGTGTGCTTGCGGATGGCCGGTTAGCAGATTTGATTCGACGGGTTGCAACCTTTGGTATGGTGTTAATGAAGCTTGATGTACGGCAGGAATCAGGCCGGCATACGGAAACACTTGATGCCATCACATCTTACCTGGATCTTGGTGTTTATAGTGAGTGGGATGAACAAAAGAAACTGGATTTCTTGACTAGAGAGCTGAAAGGGAAGCGCCCTCTTGTCCCCCCATACATACAGGTTACTGCTGATGTGCAAGAAGTTCTTGATACATTCCGTGTTGCTGCAGAGTTAGGAAGCGATGCACTTGGAGCATATGTGATTTCAATGGCCTCAAATGCAAGCGATGTCCTAGCGGTTGAACTGTTGCAGAAGGACGCAAGACTTACAGTCAGCGGGGACCTAGGAAGGCCATGTCCTGGTGGAACGTTGAGAGTTGTTCCACTGTTTGAGACGGTGAATGATCTGCGAGAAGCCGGCCCAGCGATCAGAAAGTTACTGTCCATCGACTGGTACAGAGACCACATCATCAAGAACCATAACGGGCACCAAGAGGTGATGGTGGGCTACTCTGATTCCGGCAAGGACGCCGGCCGTTTCACCGCGGCATGGGAGCTATACAAGGCTCAGGAAGATGTGGTGGCCGCGTGCAACGCGTTCGGCATCAAGGTTACGCTCTTCCATGGCCGCGGCGGGAGCATCGGCCGCGGCGGCGGGCCGACCTATCTCGCCATTCAGTCGCAGCCACCCGGCTCAGTGATGGGAACTCTTCGGTCGACGGAGCAAGGGGAGATGGTGCAGGCCAAGTTCGGGCTGCCGCAGACGTCTGTCCGGCAGCTGGAGATATACACGACGGCGGTGCTGCTGGCGACGCTGCGGCCGCCGCAGCCGCCGCGGGACGACAAGTGGCGGGGGGTGATGGAGGAGATATCGCGGGTGAGCTGCGCGCAGTACCGGAGCACGGTGTACGAGAACCCGGAGTTCATCAAGTACTTCCAGGAGGCGACGCCGCAGGCGGAGCTGGGCTACCTCAACATCGGCAGCCGCCCCGCGAAGCGCAGGACCACGCCGGGGATCTCCAACCTTCGCGCCATCCCCTGGGTGTTCGCGTGGACGCAGACGCGGCTGGTGCTCCCGGCGTGGCTCGGCGTGGGGCGCGGCCTCCAGGACGCCTGCGACAAGGGCCACACCCACGAGCTCCGCGCCATGTACGAGGAGTGGCCCTTCTTCCAGTCCACGGTGGACCTCATCGAGATGGTGGTGGCCAAGGCGGACGCGCCCATGGCCAAGCACTACGACGACGTGCTGGTGCACGACGCGGGGCGGCGGACGCTCGGGGCGGAGCTCCGGCAGGAGCTGGCGCGGACGGAGAACTGCGTGCTGGCGGTGAGCGGTCACAAGAAGCTGTCCGCCAACAACCGCAGCCTGCGGAAGCTGATCGACAGCAGGCTCACGTACCTCAACCCCATGAACATGCTCCAGGTCGAGGTCCTCCGTCGCCTCCGCCAGGACGACGACAACCGCAAGCTCCGCGACGCGCTGCTCATCACCATCAACGGCATTGCCGCCGGCATGCGCAACACCGGCTGACTCCTCTTCCCTCCTCTCCTCTGCAAATTAACTTATATTTCTTGCAACTATATTTCCGTCTGAACTAATTACCGGAGTTTTTTTTTCTCGTTCAATTTTCCCTCAAAATAAGAAAGAAACCTTGCATGTAGCATTTTCACATTGGATTGGATATGTACATTGCATGGAGAATGAAATAGCATTATAGACTATAGTGGTGTGGATTGAT] [+] EMBL AK100688 [TCAATCCCTCTCTCCATCTGGTGCTCTCTATCTGAGGAATCCGAATCCGATCAGGGGAGGCGAGGCGCGGCGGTGATCGGCGATGACGGACACGACGGATGACATCGCGGAGGGGATATCATTCCAGGCGTTCGAGGACGACTGCCGGCTGCTGGGCAGCCTCCTCCACGACGTCCTCCTCCGCGAGCTCGGCCCCCGCTTCATCCACCTCCTCGAGCGCATCACCATCCTCGCCCAGAGCGCCGTCAACATGCGCTCCGCCGGGGTGGAGGACACCGCCGTCGTCGTCGAGAAGCAGCTCGGCGCCGAGCT GGCCGCCATGTCGCTCGAGGACTCGCTCTGCCTCGCCCGCGCCTTCTCCCACCACCTCAACCTCATGACCATCGCCGACACTTACCACAGGGTTCGTAAAGCACGCAATTTCGCCGACCTGTCGAAATCATGTGATGATACATTTGCCAAATTGATTCAAAGTGGTGTTAGCCCGGAAGAACTCTATGACACTGTATGCAAGCAGGAGGTTGAAATTGTTCTGACAGCTCATCCAACTCAAATCAATCGGCGGACTTTGCAGTACAAACACCTTAGAATAGCTCACCTTTTGGAATTCAACGAACGTGCTGATCTTAGCCTCGAGGATAAAGAAATTCTAATTGAAGATCTGGTAAGAGAAATCACGGCAATATGGCAGACTGATGAGTTGAGGCGCCATAAACCTACACCTGTTGACGAAGCTAGAGCTGGCCTTCATATTGTTGAGCAATCGCTCTGGAAAGCAATACCACACTATCTTCGCCGTGTTAGCAATGCTCTAAAGAAGAACACTGGCAAGCCACTTCCGCTCACCTGCACACCAATCAAATTCGGTTCATGGATGGGTGGTGACCGTGATGGGAATCCTAATGTCACAGCAAAAGTTACTAGGGATGTTTCCATTTTGTCCCAATGGATGGCAATTGATCTGTACATCCGGGAACTAGACACTCTAAGCTTTGAGCTATCAATTAACAGATGCAGCGAGAAGCTTGCAAACTTAGCAAATGACATCCTGCTCAAAGAATCAGCATCAGAGGACCAGAAGACCAATACCTGGAATCAAACTGGACCCCAGAACAATCTAAAGCTTCAGCACAGCTTGGCCCTTCCTGCACAGCTTCCTTCTGGTGCTGATCTTCCATCATGTACAGAATGCAACGATGGGGAATCTCAAATCAGAATGTCAAAACTTCCAGGGAATCCAAAGCATAAGTTGGCTCTAAACATAACAGAAAAACGTGAAGACAGTCCATTGCCGTCTCCTAGTCATCGCCCGATGGGTCGAACTCCAAGTGGAGATCAACTAAGGAAGATGTTCACAGAATCCCAAATTGGTCGATCGAGCTTCCGGAAACTTCTAGAACCAAGCATATCAGAGAGACCAGGGAGTACTCCTTATAGAGTTGTCCTTGGTGATGTGAAAGAAAAGCTGATGAACACACGGAGACGACTCGAGCTTCTTCTTGAGGATCTACCATGTGATCGTGATACTTCAGAATATTATGATACATCGGATAAACTTTTGGAGCCCTTGCTTTTGTGTTATCAATCACTGCAATCATGTGGATCTAGTGTGCTTGCGGATGGCCGGTTAGCAGATTTGATTCGACGGGTTGCAACCTTTGGTATGGTGTTAATGAAGCTTGATGTACGGCAGGAATCAGGCCGGCATACGGAAACACTTGATGCCATCACATCTTACCTGGATCTTGGTGTTTATAGTGAGTGGGATGAACAAAAGAAACTGGATTTCTTGACTAGAGAGCTGAAAGGGAAGCGCCCTCTTGTCCCCCCATACATACAGGTTACTGCTGATGTGCAAGAAGTTCTTGATACATTCCGTGTTGCTGCAGAGTTAGGAAGCGATGCACTTGGAGCATATGTGATTTCAATGGCCTCAAATGCAAGCGATGTCCTAGCGGTTGAACTGTTGCAGAAGGACGCAAGACTTACAGTCAGCGGGGACCTAGGAAGGCCATGTCCTGGTGGAACGTTGAGAGTTGTTCCACTGTTTGAGACGGTGAATGATCTGCGAGAAGCCGGCCCAGCGATCAGAAAGTTACTGTCCATCGACTGGTACAGAGACCACATCATCAAGAACCATAACGGGCACCAAGAGGTGATGGTGGGCTACTCTGATTCCGGCAAGGACGCCGGCCGTTTCACCGCGGCATGGGAGCTATACAAGGCTCAGGAAGATGTGGTGGCCGCGTGCAACGCGTTCGGCATCAAGGTTACGCTCTTCCATGGCCGCGGCGGGAGCATCGGCCGCGGCGGCGGGCCGACCTATCTCGCCATTCAGTCGCAGCCACCCGGCTCAGTGATGGGAACTCTTCGGTCGACGGAGCAAGGGGAGATGGTGCAGGCCAAGTTCGGGCTGCCGCAGACGTCTGTCCGGCAGCTGGAGATATACACGACGGCGGTGCTGCTGGCGACGCTGCGGCCGCCGCAGCCGCCGCGGGACGACAAGTGGCGGGGGGTGATGGAGGAGATATCGCGGGTGAGCTGCGCGCAGTACCGGAGCACGGTGTACGAGAACCCGGAGTTCATCAAGTACTTCCAGGAGGCGACGCCGCAGGCGGAGCTGGGCTACCTCAACATCGGCAGCCGCCCCGCGAAGCGCAGGACCACGCCGGGGATCTCCAACCTTCGCGCCATCCCCTGGGTGTTCGCGTGGACGCAGACGCGGCTGGTGCTCCCGGCGTGGCTCGGCGTGGGGCGCGGCCTCCAGGACGCCTGCGACAAGGGCCACACCCACGAGCTCCGCGCCATGTACGAGGAGTGGCCCTTCTTCCAGTCCACGGTGGACCTCATCGAGATGGTGGTGGCCAAGGCGGACGCGCCCATGGCCAAGCACTACGACGACGTGCTGGTGCACGACGCGGGGCGGCGGACGCTCGGGGCGGAGCTCCGGCAGGAGCTGGCGCGGACGGAGAACTGCGTGCTGGCGGTGAGCGGTCACAAGAAGCTGTCCGCCAACAACCGCAGCCTGCGGAAGCTGATCGACAGCAGGCTCACGTACCTCAACCCCATGAACATGCTCCAGGTCGAGGTCCTCCGTCGCCTCCGCCAGGACGACGACAACCGCAAGCTCCGCGACGCGCTGCTCATCACCATCAACGGCATTGCCGCCGGCATGCGCAACACCGGCTGACTCCTCTTCCCTCCTCTCCTCTGCAAATTAACTTATATTTCTTGCAACTATATTTCCGTCTGAACTAATTACCGGAGTTTTTTTTTCTCGTTCAATTTTCCCTCAAAATAAGAAAGAAACCTTGCATGTAGCATTTTCACATTGGATTGGATATGTACATTGCATGGAGAATGAAATAGCATTATAGACTATAGTGGTGTGGATTGAT] [+] EMBL C28194 [ CCTCTCTCCATCTGGTGCTCTCTATCTGAGGAATCCGAATCCGATCAGGGGAGGCGAGGCGCGGCGGTGATCGGCGATGACGGACACGACGGATGACATCGCGGAGGGGATATCATTCCAGGCGTTCGAGGACGACTGCCGGCTGCTGGGCAG CTCCTCCACGACGTCCTCCTCCGCGAGCTCGGCCCCCGCTTCATCCACCTCCTCGAGCGCATCACCATCCTCGCCCAGAGCGCCGTCAACATGCGCTCCGCCGGGGTGGAGGACAACGCCGTCGTCGTCGAGAAGCAGCTCGGCGCCGAGCTNGGCCGCCATGTCGCTCGAGGACTCNATCTGCCTCGNCCGGGGCTTTTTCCACCAACTNAACC ] [+] EMBL AK119573 [ TTTGTCCCAATGGATGGCAATTGATCTGTACATCCGGGAACTAGACACTCTAAGCTTTGAGCTATCAATTAACAGATGCAGCGAGAAGCTTGCAAACTTAGCAAATGACATCCTGCTCAAAGAATCAGCATCAGAGGACCAGAAGACCAATACCTGGAATCAAACTGGACCCCAGAACAATCTAAAGCTTCAGCACAGCTTGGCCCTTCCTGCACAGCTTCCTTCTGGTGCTGATCTTCCATCATGTACAGAATGCAACGATGGGGAATCTCAAATCAGAATGTCAAAACTTCCAGGGAATCCAAAGCATAAGTTGGCTCTAAACATAACAGAAAAACGTGAAGACAGTCCATTGCCGTCTCCTAGTCATCGCCCGATGGGTCGAACTCCAAGTGGAGGTCAACTAAGGAAGATGTTCACAGAATCCCAAATTGGTCGATCGAGCTTCCGGAAACTTCTAGAACCAAGCATATCAGAGAGACCAGGGAGTACTCCTTATAGAGTTGTCCTTGGTGATGTGAAAGAAAAGCTGATGAACACACGGAGACGACTCGAGCTTCTTCTTGAGGATCTACCATGTGATCGTGATACTTCAGAATATTATGATACATCGGATAAACTTTTGGAGCCCTTGCTTTTGTGTTATCAATCACTGCAATCATGTGGATCTAGTGTGCTTGCGGATGGCCGGTTAGCAGATTTGATTCGACGGGTTGCAACCTTTGGTATGGTGTTAATGAAGCTTGATGTACGGCAGGAATCAGGCCGGCATACGGAAACACTTGATGCCATCACATCTTACCTGGATCTTGGTGTTTATAGTGAGTGGGATGAACAAAAGAAACTGGATTTCTTGACTAGAGAGCTGAAAGGGAAGCGCCCTCTTGTCCCCCCATACATACAGGTTACTGCTGATGTGCAAGAAGTTCTTGATACATTCCGTGTTGCTGCAGAGTTAGGAAGCGATGCACTTGGAGCATATGTGATTTCAATGGCCTCAAATGCAAGCGATGTCCTAGCGGTTGAACTGTTGCAGAAGGACGCAAGACTTACAGTCAGCGGGGACCTAGGAAGGCCATGTCCTGGTGGAACGTTGAGAGTTGTTCCACTGTTTGAGACGGTGAATGATCTGCGAGAAGCCGGCCCAGCGATCAGAAAGTTACTGTCCATCGACTGGTACAGAGACCACATCATCAAGAACCATAACGGGCACCAAGAGGTGATGGTGGGCTACTCTGATTCCGGCAAGGACGCCGGCCGTTTCACCGCGGCATGGGAGCTATACAAGGCTCAGGAAGATGTGGTGGCCGCGTGCAACGCGTTCGGCATCAAGGTTACGCTCTTCCATGGCCGCGGCGGGAGCATCGGCCGCGGCGGCGGGCCGACCTATCTCGCCATTCAGTCGCAGCCACCCGGCTCAGTGATGGGAACTCTTCGGTCGACGGAGCAAGGGGAGATGGTGCAGGCCAAGTTCGGGCTGCCGCAGACGTCTGTCCGGCAGCTGGAGATATACACGACGGCGGTGCTGCTGGCGACGCTGCGGCCGCCGCAGCCGCCGCGGGACGACAAGTGGCGGGGGGTGATGGAGGAGATATCGCGGGTGAGCTGCGCGCAGTACCGGAGCATGGTGTACGAGAACCCGGAGTTCATCAAGTACTTCCAGGAGGCGACGCCGCAGGCGGAGCTGGGCTACCTCAACATCGGCAGCCGCCCCGCGAAGCGCAGGACCACGCCGGGGATCTCCAACCTTCGCGCCATCCCCTGGGTGTTCGCGTGGACGCAGACGCGGCTGGTGCTCCCGGCGTGGCTCGGCGTGGGGCGCGGCCTCCAGGACGCCTGCGACAAGGGCCACACCCACGAGCTCCGCGCCATGTACGAGGAGTGGCCCTTCTTCCAGTCCACGGTGGACCTCATCGAGATGGTGGTGGCCAAGGCGGACGCGCCCATGGCCAAGCACTACGACGACGTGCTGGTGCACGACGCGGGGCGGCGGACGCTCGGGGCGGAGCTCCGGCAGGAGCTGGCGCGGACGGAGAACTGCGTGCTGGCGGTGAGCGGTCACAAGAAGCTGTCCGCCAACAACCGCAGCCTGCGGAAGCTGATCGACAGCAGGCTCACGTACCTCAACCCCATGAACATGCTCCAGGTCGAGGTCCTCCGTCGCCTCCGCCAGGACGACGACAACCGCAAGCTCCGCGACGCGCTGCTCATCACCATCAACGGCATTGCCGCCGGCATGCGCAACACCGGCTGACTCCTCTTCCCTCCTCTCCTCTGCAAATTAACTTATATTTCTTGCAACTATATTTCCGTCTGAACTAATTACCGGAG TTTTTTTTCTCGTTCAATTTTCCCTCAAAATAAGAAAGAAACCTTGCATGTAGCATTTTCACATTGGATTGGATATGTA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||