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Oryza sativa
cluster # 3926 cluster # 3926       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3926#0 length = 844 sequences # 3  

consensusID : consensus_3926#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 844
fasta sequence
                              [TCCTCCCGTTCTGGCTCGCCACTCCTCCCAAAGTCCATTCAACTCACCCACGTAGGAAGGTGGAAGCGGTTTCTTGGGGTTTGGATATGCTAAAGCGGTCGCATGGAGGGTTCCGGCTGGGGCGGAAGCTGCTCAGTGCCTGGCGATGGGCGCTCTGCTGCCGGCGCCGGCGCCGGCGGGGCTACCTGCGCCTGCAGACGACGTCGGGTGGGTGCGGCGGCGCTTGCAAGGAGGGGAGCGAAGAAGCCAAGAGGCTGGCCCCGGTGCTGCGGTGGGGGCGGTCGCTGGTGCGGCGGCTGAGCCTCGGGC-GGAAGGACGGCGGGCGGCGGCGGATTCTGGACGAGCCCGTG-TCGACGCCC-AAGGGGCAGGT-GGCGGTGTACGTCGGCGGCGGCAACCCCGGCGAGTCGCTGAGGTACGTGGTGCCGGTGGTGTACTTCAACCACCCCATGTTCGGGGAGCTTCTGAGGGAGGCCGAGGAGGAGTTCGGCTTCCAGCACCCCGGCGGCATCACCATCCCCTGCGCCGCGTCGCGGTTCGAGCGCGCCGCCGCCGTGGCGGCCGCCGGGAAGAAGGCGTTCGGCAGGTGGTAGCATCAGGCGGCGGATGGGGATGGTGTAAATATGCGTTCCATCAGAATGGGCTGATTTTGTTCTCTTGTTCGGTTCTCTGTTTCTCCATGGATTTAGCTAGTCATTTAGAGGCTAATTTTTTTCTCGACATGTGCGTGCCGGGATCATCTTGGAATCATTAACGGAGTAACAGTTGTCTTTTTTTAGCTTTTTAGTTCCGATGTTGTTTACAAATCCAACTTGGACGGATCGATCATGGTGTTGATGAATTTCCC]

[+] EMBL AK108118             [TCCTCCCGTTCTGGCTCGCCACTCCTCCCAAAGTCCATTCAACTCACCCACGTAGGAAGGTGGAAGCGGTTTCTTGGGGTTTGGATATGCTAAAGCGGTCGCATGGAGGGTTCCGGCTGGGGCGGAAGCTGCTCAGTGCCTGGCGATGGGCGCTCTGCTGCCGGCGCCGGCGCCGGCGGGGCTACCTGCGCCTGCAGACGACGTCGGGTGGGTGCGGCGGCGCTTGCAAGGAGGGGAGCGAAGAAGCCAAGAGGCTGGCCCCGGTGCTGCGGTGGGGGCGGTCGCTGGTGCGGCGGCTGAGCCTCGGGC GGAAGGACGGCGGGCGGCGGCGGATTCTGGACGAGCCCGTG TCGACGCCC AAGGGGCAGGT GGCGGTGTACGTCGGCGGCGGCAACCCCGGCGAGTCGCTGAGGTACGTGGTGCCGGTGGTGTACTTCAACCACCCCATGTTCGGGGAGCTTCTGAGGGAGGCCGAGGAGGAGTTCGGCTTCCAGCACCCCGGCGGCATCACCATCCCCTGCGCCGCGTCGCGGTTCGAGCGCGCCGCCGCCGTGGCGGCCGCCGGGAAGAAGGCGTTCGGCAGGTGGTAGCATCAGGCGGCGGATGGGGATGGTGTAAATATGCGTTCCATCAGAATGGGCTGATTTTGTTCTCTTGTTCGGTTCTCTGTTTCTCCATGGATTTAGCTAGTCATTTAGAGGCTAATTTTTTTCTCGACATGTGCGTGCCGGGATCATCTTGGAATCATTAACGGAGTAACAGTTGTCTTTTTTTAGCTTTTTAGTTCCGATGTTGTTTACAAATCCAACTTGGACGGATCGATCATGGTGTTGATGAATTTCCC]
[+] EMBL AU070854             [                     CTCCTCCCAAAGTCCATTCAACTCACCCACGTAGGAAGGTGGAAGCGGTTTCTTGGGGTTTGGATATGCTAAAGCGGTCGCATGGAGGGTTCCGGCTGGGGCGGAAGCTGCTCAGTGCCTGGCGATGGGCGCTCTGCTGCCGGCGCCGGCGCCGGCGGGGCTACCTGCGCCTGCAGACGACGTCGGGTGGGTGCGGCGGCGCTTGCAAGGAGGGGANCGAAGAAGCCAAGAGGCTGGCCCCGGTGCTGCGGTGGGGGCGGTCNCTGGTGCGGCGGCTGAGCCTCGGGCGGGAAGGACGGCGGGCGGCGGCGGATTCTGGACGAGCCCGTGTTCGACGCCCAAANGGGCAGGTGGGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU163467             [                                                                                                                                                          CTGCTGCCGGCGCCGGCGCCGGCGGGGCTACCTGCGCCTGCAGACGACGTCGGGTGGGTGCGGCGGCGCTTGCAAGGAGGGGAGCGAAGAAGCCAAGAGGCTGGCCCCGGTGCTGCGGTGGGGGCGGTCGCTGGTGCGGCGGCTGAGCCTCGGGC GGAAGGACGGCGGGCGGCGGCGGATTCTGGACGAGCCCGTG TCGACGCCC AAGGGGCAGGT GGCGGTGTACGTCGGCGGCGGCAACCCCGGCGAGTCGCTGAGGTACGTGGTGCCGGTGGTGTACTTCAACCACCCCATGTTCGGGGAGCTTCTGAGGGAGGCCGAGGAGGAGTTCGG TTCCAGCACCCCGGCGGCATCACCATCCCCTGCNGC CGTCGCGGTT                                                                                                                                                                                                                                                                                                                     ]


>consensus_3926#0 TCCTCCCGTTCTGGCTCGCCACTCCTCCCAAAGTCCATTCAACTCACCCACGTAGGAAGG TGGAAGCGGTTTCTTGGGGTTTGGATATGCTAAAGCGGTCGCATGGAGGGTTCCGGCTGG GGCGGAAGCTGCTCAGTGCCTGGCGATGGGCGCTCTGCTGCCGGCGCCGGCGCCGGCGGG GCTACCTGCGCCTGCAGACGACGTCGGGTGGGTGCGGCGGCGCTTGCAAGGAGGGGAGCG AAGAAGCCAAGAGGCTGGCCCCGGTGCTGCGGTGGGGGCGGTCGCTGGTGCGGCGGCTGA GCCTCGGGCGGAAGGACGGCGGGCGGCGGCGGATTCTGGACGAGCCCGTGTCGACGCCCA AGGGGCAGGTGGCGGTGTACGTCGGCGGCGGCAACCCCGGCGAGTCGCTGAGGTACGTGG TGCCGGTGGTGTACTTCAACCACCCCATGTTCGGGGAGCTTCTGAGGGAGGCCGAGGAGG AGTTCGGCTTCCAGCACCCCGGCGGCATCACCATCCCCTGCGCCGCGTCGCGGTTCGAGC GCGCCGCCGCCGTGGCGGCCGCCGGGAAGAAGGCGTTCGGCAGGTGGTAGCATCAGGCGG CGGATGGGGATGGTGTAAATATGCGTTCCATCAGAATGGGCTGATTTTGTTCTCTTGTTC GGTTCTCTGTTTCTCCATGGATTTAGCTAGTCATTTAGAGGCTAATTTTTTTCTCGACAT GTGCGTGCCGGGATCATCTTGGAATCATTAACGGAGTAACAGTTGTCTTTTTTTAGCTTT TTAGTTCCGATGTTGTTTACAAATCCAACTTGGACGGATCGATCATGGTGTTGATGAATT TCCC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)