cluster # 3927

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Oryza sativa
cluster # 3927 cluster # 3927 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3927#0 length = 1557 sequences # 3
consensusID : consensus_3927#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1557
fasta sequence
                              [GCAGCCGGCATCACCAATGGCTTAGCAGCAATCAAGCTCTCACCACTCCGGCGTCGCTCGTAATCCATCTGCTTTACCCCATGGCCGACCCAGAGGACGCCGCCGCCGCCGCCGCCGCCGGGAATGAAGACGACGTGGAGGACCTCTACGCGGACCTCGACGACCAGGTGGCGGCCGCGCTTGCCGCCGCCGGGGAGAGCGGAGGCTCCAACCCGGCCACCGACGGCGAGGCCGAGGCCGAGGCGCCGGGAGCCCACCACACGGAGGCCGACGCGAACGAGGCGGTGGACTTGGGCGACGGGACTGCGGGCTACATCAGCAGCGACGAGGAGAGCGAGGATGACCTCCATATCGTGCTCAACGAGGATGGCGCCGCGCCGCCGCCTCCTCCTCCTGCTGGCCGATGCGAGGAGGGGAGCGAGGAAGGGGAGGTTTCGGGTAGCTGTGTGAAAGGCCTGTCTACTGATGGCGGTCGGGGCAAGCTTGGTGAGCTTCACCGGAAGGGGCTTTTCGAGAAAACAACAGCACCGATCAC-AGGACAAGGTGATCGAAGCCACCAGCATGCATTTCAAAAGGAATTCAATTTTTTCTTACCAAGGAACAGGACAGTTTTTGACGTAGACATTGAAGCATTTCAAGAGAAGCCCTGGAGACAGCATGGTGTGGATCTCACGGACTACTTCAATTTCGGTCTGGATGAAGAAAGCTGGAGAAAATATTGTTTTGACATGGAACACTTCAGGCATGGAACCAGAACACTTGCAAATGAATTGTCAGGATTGTAACAGGAGTTCCATTACAATCTTGGATTGAGTAAATCAGTGCCAAAGTCAGAGATTTATTCTGTATTGAAAGAAGGAAATGGGATTGCTAAGCCAAAGGGTAGAGCAATCCATGTTGAAGGTGGTATGCATGAACGTCTTCCATCAGCAGA-TATGTGGCCT-CCAAGACAAAGGGATTCTGATGTGATACAGGTAAACATGATGTTCCCACCCTCAAACCGCTCCAGTTCAGATGACAGGTCCACAGTAAATGACAAATGCATCACTACCAAAAGATGTGGGCCATCCAATAACCATCCAGGTGTTGATGAATATCTGAAGGAAACTAGCTCTGTGGTGGACAGAGTGGTTGATAAAGAAGTGCACAAGAGAGGTTCCTCAGAGTGTACCAGGAGCAAAACGGTTCTAGGAGATTCTGCCTGTGCAGGGGCTCAATCTTCTACTCCTGATAATTCTGACATGCTTTCTGAAGAATCAACAGAAGATTTTCATTTTAAGAGGAAGCGTGGAAAATCAAATTCCAATGCTTTTTATGTGGAAACCAACCGTAAGGATGAGCATGTCTTATCAGATTTTTGCCGTCATGCAAGTAAATCAGACCAAGAAAGTAGCAAGGGTGAGAGCCATAGATATACCCCCTCTCCTGCTGATGACAGATATCACAAGGCAACTAAACGTCAGAGGATGGATGAAGCTGGAGCATGCATTTCTAGTCGATCTCTTAATAACTGCCAAAGTGATCACCATCTCCATGAATCTGGACATAGAGCAAAAA]

[+] EMBL AK064183             [GCAGCCGGCATCACCAATGGCTTAGCAGCAATCAAGCTCTCACCACTCCGGCGTCGCTCGTAATCCATCTGCTTTACCCCATGGCCGACCCAGAGGACGCCGCCGCCGCCGCCGCCGCCGGGAATGAAGACGACGTGGAGGACCTCTACGCGGACCTCGACGACCAGGTGGCGGCCGCGCTTGCCGCCGCCGGGGAGAGCGGAGGCTCCAACCCGGCCACCGACGGCGAGGCCGAGGCCGAGGCGCCGGGAGCCCACCACACGGAGGCCGACGCGAACGAGGCGGTGGACTTGGGCGACGGGACTGCGGGCTACATCAGCAGCGACGAGGAGAGCGAGGATGACCTCCATATCGTGCTCAACGAGGATGGCGCCGCGCCGCCGCCTCCTCCTCCTGCTGGCCGATGCGAGGAGGGGAGCGAGGAAGGGGAGGTTTCGGGTAGCTGTGTGAAAGGCCTGTCTACTGATGGCGGTCGGGGCAAGCTTGGTGAGCTTCACCGGAAGGGGCTTTTCGAGAAAACAACAGCACCGATCAC AGGACAAGGTGATCGAAGCCACCAGCATGCATTTCAAAAGGAATTCAATTTTTTCTTACCAAGGAACAGGACAGTTTTTGACGTAGACATTGAAGCATTTCAAGAGAAGCCCTGGAGACAGCATGGTGTGGATCTCACGGACTACTTCAATTTCGGTCTGGATGAAGAAAGCTGGAGAAAATATTGTTTTGACATGGAACACTTCAGGCATGGAACCAGAACACTTGCAAATGAATTGTCAGGATTGTAACAGGAGTTCCATTACAATCTTGGATTGAGTAAATCAGTGCCAAAGTCAGAGATTTATTCTGTATTGAAAGAAGGAAATGGGATTGCTAAGCCAAAGGGTAGAGCAATCCATGTTGAAGGTGGTATGCATGAACGTCTTCCATCAGCAGA TATGTGGCCT CCAAGACAAAGGGATTCTGATGTGATACAGGTAAACATGATGTTCCCACCCTCAAACCGCTCCAGTTCAGATGACAGGTCCACAGTAAATGACAAATGCATCACTACCAAAAGATGTGGGCCATCCAATAACCATCCAGGTGTTGATGAATATCTGAAGGAAACTAGCTCTGTGGTGGACAGAGTGGTTGATAAAGAAGTGCACAAGAGAGGTTCCTCAGAGTGTACCAGGAGCAAAACGGTTCTAGGAGATTCTGCCTGTGCAGGGGCTCAATCTTCTACTCCTGATAATTCTGACATGCTTTCTGAAGAATCAACAGAAGATTTTCATTTTAAGAGGAAGCGTGGAAAATCAAATTCCAATGCTTTTTATGTGGAAACCAACCGTAAGGATGAGCATGTCTTATCAGATTTTTGCCGTCATGCAAGTAAATCAGACCAAGAAAGTAGCAAGGGTGAGAGCCATAGATATACCCCCTCTCCTGCTGATGACAGATATCACAAGGCAACTAAACGTCAGAGGATGGATGAAGCTGGAGCATGCATTTCTAGTCGATCTCTTAATAACTGCCAAAGTGATCACCATCTCCATGAATCTG               ]
[+] EMBL C27099               [                                                                                                                                                                                                                CAACCCGGCCACCGACGGCGAGGCCGAGGCCGAGGCGCCGGGAGCCCACCACACGGAGGCCGACGCGAACGAGGCGGTGGACTTGGGCGACGGGACTGCGGGCTACATCAGCAGCGACGAGGAGAGCGAGGATGACCTCCATATCGTGCTCAACGAGGATGGCGCCGCGCCGNCGNCTCCTCCTCCTGCTGGCCGATGCGAGGAGGGGAG GAGGAAGGGGAGGTTTCGGGTAGCTGTNTGAAAGGCCTGTCTACTGATGGCGGTCGGGGCAAGCTTGGTGAGCTTCACCGGAAGGGGCTTTTCGAGAAAACAACAGCACCGATCACAAGGACAAGGTGATCGAAGNCACCAGCATGCATTTNAAAGGGAATTCAATTTTTTTTTt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU100792             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAGCAGATTATGTGGCCTCCCAAGACAAAGGGATNCTGATGTGATACAGGTAAACATGATGTTCCCACCTTCAACCCGCTCCAGTTCAGATGACAGGTCCACAGTAAATGACAAATGCATCACTACCAAAAGATGTGGGCCATCCAATAACCATCCAGGTGTTGATGAATATCTGAAGGAAACTAGCTCTGTGGTGGACAGAGTGGTTGATAAAGAAGTGCACAAGAGAGGTTCCTCAGAGTGTACCAGGAGCAAAACGGTTCTAGGAGATTCTGCCTGTGCAGGGGCTCAATCTTCTACTCCTGATAATTCTGACATGCTTTCTGAAGAATCAACAGAAGATTTTCATTTTAAGAGGAAGCGTGGAAAATCAAATTCCAATGCTTTTTATGTGGAAACCAACCGTAAGGATGAGCATGTCTTATCAGATTTTTGCCGTCATGCAAGTAAATCAGACCAAGAAAGTAGCAAGGGTGAGAGCCATAGATATACCCCCTCTCCTGCTGATGACAGATATCACAAGGCAACTAAACGTCAGAGGATGGATGAAGCTGGAGCATGCATTTCTAGTCGATCTCTTAATAACTGCCAAAGTGATCACCATCTCCATGAATCTGGACATAGAGCAAAAA]




>consensus_3927#0
GCAGCCGGCATCACCAATGGCTTAGCAGCAATCAAGCTCTCACCACTCCGGCGTCGCTCG
TAATCCATCTGCTTTACCCCATGGCCGACCCAGAGGACGCCGCCGCCGCCGCCGCCGCCG
GGAATGAAGACGACGTGGAGGACCTCTACGCGGACCTCGACGACCAGGTGGCGGCCGCGC
TTGCCGCCGCCGGGGAGAGCGGAGGCTCCAACCCGGCCACCGACGGCGAGGCCGAGGCCG
AGGCGCCGGGAGCCCACCACACGGAGGCCGACGCGAACGAGGCGGTGGACTTGGGCGACG
GGACTGCGGGCTACATCAGCAGCGACGAGGAGAGCGAGGATGACCTCCATATCGTGCTCA
ACGAGGATGGCGCCGCGCCGCCGCCTCCTCCTCCTGCTGGCCGATGCGAGGAGGGGAGCG
AGGAAGGGGAGGTTTCGGGTAGCTGTGTGAAAGGCCTGTCTACTGATGGCGGTCGGGGCA
AGCTTGGTGAGCTTCACCGGAAGGGGCTTTTCGAGAAAACAACAGCACCGATCACAGGAC
AAGGTGATCGAAGCCACCAGCATGCATTTCAAAAGGAATTCAATTTTTTCTTACCAAGGA
ACAGGACAGTTTTTGACGTAGACATTGAAGCATTTCAAGAGAAGCCCTGGAGACAGCATG
GTGTGGATCTCACGGACTACTTCAATTTCGGTCTGGATGAAGAAAGCTGGAGAAAATATT
GTTTTGACATGGAACACTTCAGGCATGGAACCAGAACACTTGCAAATGAATTGTCAGGAT
TGTAACAGGAGTTCCATTACAATCTTGGATTGAGTAAATCAGTGCCAAAGTCAGAGATTT
ATTCTGTATTGAAAGAAGGAAATGGGATTGCTAAGCCAAAGGGTAGAGCAATCCATGTTG
AAGGTGGTATGCATGAACGTCTTCCATCAGCAGATATGTGGCCTCCAAGACAAAGGGATT
CTGATGTGATACAGGTAAACATGATGTTCCCACCCTCAAACCGCTCCAGTTCAGATGACA
GGTCCACAGTAAATGACAAATGCATCACTACCAAAAGATGTGGGCCATCCAATAACCATC
CAGGTGTTGATGAATATCTGAAGGAAACTAGCTCTGTGGTGGACAGAGTGGTTGATAAAG
AAGTGCACAAGAGAGGTTCCTCAGAGTGTACCAGGAGCAAAACGGTTCTAGGAGATTCTG
CCTGTGCAGGGGCTCAATCTTCTACTCCTGATAATTCTGACATGCTTTCTGAAGAATCAA
CAGAAGATTTTCATTTTAAGAGGAAGCGTGGAAAATCAAATTCCAATGCTTTTTATGTGG
AAACCAACCGTAAGGATGAGCATGTCTTATCAGATTTTTGCCGTCATGCAAGTAAATCAG
ACCAAGAAAGTAGCAAGGGTGAGAGCCATAGATATACCCCCTCTCCTGCTGATGACAGAT
ATCACAAGGCAACTAAACGTCAGAGGATGGATGAAGCTGGAGCATGCATTTCTAGTCGAT
CTCTTAATAACTGCCAAAGTGATCACCATCTCCATGAATCTGGACATAGAGCAAAAA
clustalw multiple alignements is not computed in this case