cluster # 3933

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Oryza sativa
cluster # 3933 cluster # 3933 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3933#0 length = 1477 sequences # 3
consensusID : consensus_3933#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1477
fasta sequence
                              [GCGACGGAGAGAGTTGCATATAGAGAGAGAGAGAGAGAGAATGATGGATTAGCTAGCTAGCTTGTTCCTCCGTCGGCTCGGGCGGTCCTCTTCGAATTGGATCTTCTTCTTCTACTCACATACACACACACTCGATCTTGTGCCTCTGCAGCACACGGTAGTGTTGGTTGATGGCAAATCCTAGTCGTCATAGCAGGTCAGGTGATGGTAATGGTTGGGCTAGCCCCGAGCGGACGATGGTGTGGAGGACGGAGCTCAAGAAGAAGCAGATGAAGCAGGTTGTGGTGGGCGTGGTGTACTACCTGTGCCGGCAAGACGGGCAGCTGGATCACCCCCATTTCGTCCACGTCCACGTCCCCTCCGACTCCGACTCCGATCATCCGCGGCCGCGCCTCCACCTCCGCGACTTCATCGCCCGCCTCAGCGACCTCCGCGGCGCCGCCATGCCCGCCGCCTACTCCTGGTCCGCCAAGACCACCTACAGGAGGAACGCCGGCTACGTCTGGCAAGACCTCACCGCCGACGACCTCATCCCCGCGCCATCAACCAACCATGAGGAGTATGTCCTCAAGGGCTCCCCGCTGCTCCACCATAACTCCAATACGCCCGCGCAGCACAGGAGGTGCATGACATCCTTTGACCTCGCCGACTATCACCGCACCACCGACCCTGTCCCTGTCCCGGCGGCGGCGCAGCAGTCCTTAATTGGCATTGATGAGATATCACCTCCACCGTCTTCAAGCAGCCCCGACGACACCACCACCCAGCTTGTTACCCTGAAGCAGAAGCAACAGGAGGAGGATGGCTGCACGCCCCAGCAACAAGCGGCGACGACACCGGCAGGGCGGATGCGGACGTCGGCGATGCTGATGAAGCTCATCTCGTGCGGCGCCTCCTCCATCAAGGAGCTGCAGGGCCAAGCACAATCACAACGCTGCCGTGCTACTGCTTGGCATAACAACAAGCCGGACATCATGGACCACCGTGACTACTTCAGTGGAAGCTTGCTGGACAACAACACAACCACCCACCCTATCGACCTCACCCTCAGGAGATCATCCTCTTGCAATGCCCACAGGGGACAGAGTAGTAGGCTTGGCGTGGTGGATCAGGATGGCGTCCCGAGGAGGCAACAGCTGCACGCCAAATCGACGGCGGCGCGCATGGACAGCCCGGAGACAGATCAGATCAGATCATAGAGGAGGGGATCAGCAAGCTAAGCTAAGCTAAGCTAATGCTCTTGTCAGGCAACTCATCCATCGAATGATACCAAAATGTTTCTTCTGTTACTAGTACTACACTAGTTAGTTATTTTATTTCCCTTTTTTTTTCATTTCAACAAGTTAGTTTGTTCGTTTGAGCGCGCGATTCGATCAGTTGGTGTGAAAACGAAAACGAAAACGATGGAACACACGTATAAAAACATCTGTGTAATCTCGTCTTTTATTAACTTAAGGGAATCAATCAATGTCAGATG]

[+] EMBL AK103552             [GCGACGGAGAGAGTTGCATATAGAGAGAGAGAGAGAGAGAATGATGGATTAGCTAGCTAGCTTGTTCCTCCGTCGGCTCGGGCGGTCCTCTTCGAATTGGATCTTCTTCTTCTACTCACATACACACACACTCGATCTTGTGCCTCTGCAGCACACGGTAGTGTTGGTTGATGGCAAATCCTAGTCGTCATAGCAGGTCAGGTGATGGTAATGGTTGGGCTAGCCCCGAGCGGACGATGGTGTGGAGGACGGAGCTCAAGAAGAAGCAGATGAAGCAGGTTGTGGTGGGCGTGGTGTACTACCTGTGCCGGCAAGACGGGCAGCTGGATCACCCCCATTTCGTCCACGTCCACGTCCCCTCCGACTCCGACTCCGATCATCCGCGGCCGCGCCTCCACCTCCGCGACTTCATCGCCCGCCTCAGCGACCTCCGCGGCGCCGCCATGCCCGCCGCCTACTCCTGGTCCGCCAAGACCACCTACAGGAGGAACGCCGGCTACGTCTGGCAAGACCTCACCGCCGACGACCTCATCCCCGCGCCATCAACCAACCATGAGGAGTATGTCCTCAAGGGCTCCCCGCTGCTCCACCATAACTCCAATACGCCCGCGCAGCACAGGAGGTGCATGACATCCTTTGACCTCGCCGACTATCACCGCACCACCGACCCTGTCCCTGTCCCGGCGGCGGCGCAGCAGTCCTTAATTGGCATTGATGAGATATCACCTCCACCGTCTTCAAGCAGCCCCGACGACACCACCACCCAGCTTGTTACCCTGAAGCAGAAGCAACAGGAGGAGGATGGCTGCACGCCCCAGCAACAAGCGGCGACGACACCGGCAGGGCGGATGCGGACGTCGGCGATGCTGATGAAGCTCATCTCGTGCGGCGCCTCCTCCATCAAGGAGCTGCAGGGCCAAGCACAATCACAACGCTGCCGTGCTACTGCTTGGCATAACAACAAGCCGGACATCATGGACCACCGTGACTACTTCAGTGGAAGCTTGCTGGACAACAACACAACCACCCACCCTATCGACCTCACCCTCAGGAGATCATCCTCTTGCAATGCCCACAGGGGACAGAGTAGTAGGCTTGGCGTGGTGGATCAGGATGGCGTCCCGAGGAGGCAACAGCTGCACGCCAAATCGACGGCGGCGCGCATGGACAGCCCGGAGACAGATCAGATCAGATCATAGAGGAGGGGATCAGCAAGCTAAGCTAAGCTAAGCTAATGCTCTTGTCAGGCAACTCATCCATCGAATGATACCAAAATGTTTCTTCTGTTACTAGTACTACACTAGTTAGTTATTTTATTTCCCTTTTTTTTTCATTTCAACAAGTTAGTTTGTTCGTTTGAGCGCGCGATTCGATCAGTTGGTGTGAAAACGAAAACGAAAACGATG                                                                       ]
[+] EMBL AK119662             [                                                        CTAGCTTGTTCCTCCGTCGGCTCGGGCGGTCCTCTTCGAATTGGATCTTCTTCTTCTACTCACATACACACACACTCGATCTTGTGCCTCTGCAACACACGGTAGTGTTGGTTGATGGCAAATCCTAGTCGTCATAGCAGGTCAGGTGATGGTAATGGTTGGGCTAGCCCCGAGCGGACGATGGTGTGGAGGACGGAGCTCAAGAAGAAGCAGATGAAGCAGGTTGTGGTGGGCGTGGTGTACTACCTGTGCCGGCAAGACGGGCAGCTGGATCACCCCCATTTCGTCCACATCCACGTCCCCTCCGACTCCGACTCCGATCATCCGCGGCCGCGCCTCCACCTCCGCGACTTCATCGCCCGCCTCAGCGACCTCCGCGGCGCCGCCATGCCCGCCGCCTACTCCTGGTCCGCCAAGACCACCTACAGGAGGAACGCCGGCTACGTCTGGCAAGACCTCACCGCCGACGACCTCATCCCCGCGCCATCAACCAACCATGAGGAGTATGTCCTCAAGGGCTCCCCGCTGCTCCACCATAACTCCAATACGCCCCCGCAGCACAGGAGGTGCATGACATCCTTTGACCTCGCCGACTATCACCGCACCACCGACCCTGTCCCTGTCCCGGCGGCGGCGCAGCAGTCCTTAATTGGCATTGATGAGATATCACCTCCACCGTCTTCAAGCAGCCCCGACGACACCACCACCCAGCTTGTTACCCTGAAGCAGAAGCAACAGGAGGAGGATGGCTGCACGCCCCAGCAACAAGCGGCGACGACACCGGCAGGGCGGATGCGGACGTCGGCGATGCTGATGAAGCTCATCTCGTGCGGCGCCTCCTCCATCAAGGAGCTGCAGGGCCAAGCACAATCACAACGTTGCCGTGCTACTGCTTGGCATAACAACAAGCCGGACATCATGGACCACCGTGACTACTTCAGTGGAAGCTTGCTGGACAACAACACAACCACCCACCCTATCGACCTCACCCTCAGGAGATCATCCTCTTGCAATGCCCACAGGGGACAGAGTAGTAGGCTTGGCGTGGTGGATCAGGATGGCGTCCCGAGGAGGCAACAGCTGCACGCCAAATCGACGGCGGCGCGCATGGACAGCCCGGAGACAGATCAGATCAGATCATAGAGGAGGGGATCAGCAAGCTAAGCTAAGCTAAGCTAATGCTCTTGTCAGGCAACTCATCCATCGAATGATACCAAAATGTTTCTTCTGTTACTAGTACTACACTAGTTAGTTATTTTATTTCCCTTTTTTTTTCATTTCAACAAGTTAGTTTGTTCGTTTGAGCGCGCGATTCGATCAGTTGGTGTGAAAACGAAAACGAAAACGATGGAACACACGTATAAAAACATCTGTGTAATCTCGTCTTTTATTAACTTAAGGGAATCAATCAATGTCAGATG]
[-] EMBL D42591               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGCTTGGCGTGGTGGATCAGGATGGCGTCCCGAGGA GCAACAG TGCACGCCAAATCGAC GCGGCGCGCATGGACAGCCCGGAGACAGATCAGATCAGATCATAGAGGAGGGGATCAGCAAGCTAAGCTAAGCTAAGCTAATGCTCTTGTCAGGCAACTCATCCATCGAATGATACCAAAATGTTTCTTCTGTTACTAGTACTACACTAGTTAGTTATTTTATTTCCCTTTTTTTTTCATTTCAACAAGTTAGTTTGTTCGTTTGAGCGCGCGATTCGATCAGTTGGTGTGAAAACGAAAACGAAAACGATGGAACACACGTATAAAAACATCTGTGTAATCTCGTCTTTTATTAACTTAAGGGAATCA              ]




>consensus_3933#0
GCGACGGAGAGAGTTGCATATAGAGAGAGAGAGAGAGAGAATGATGGATTAGCTAGCTAG
CTTGTTCCTCCGTCGGCTCGGGCGGTCCTCTTCGAATTGGATCTTCTTCTTCTACTCACA
TACACACACACTCGATCTTGTGCCTCTGCAGCACACGGTAGTGTTGGTTGATGGCAAATC
CTAGTCGTCATAGCAGGTCAGGTGATGGTAATGGTTGGGCTAGCCCCGAGCGGACGATGG
TGTGGAGGACGGAGCTCAAGAAGAAGCAGATGAAGCAGGTTGTGGTGGGCGTGGTGTACT
ACCTGTGCCGGCAAGACGGGCAGCTGGATCACCCCCATTTCGTCCACGTCCACGTCCCCT
CCGACTCCGACTCCGATCATCCGCGGCCGCGCCTCCACCTCCGCGACTTCATCGCCCGCC
TCAGCGACCTCCGCGGCGCCGCCATGCCCGCCGCCTACTCCTGGTCCGCCAAGACCACCT
ACAGGAGGAACGCCGGCTACGTCTGGCAAGACCTCACCGCCGACGACCTCATCCCCGCGC
CATCAACCAACCATGAGGAGTATGTCCTCAAGGGCTCCCCGCTGCTCCACCATAACTCCA
ATACGCCCGCGCAGCACAGGAGGTGCATGACATCCTTTGACCTCGCCGACTATCACCGCA
CCACCGACCCTGTCCCTGTCCCGGCGGCGGCGCAGCAGTCCTTAATTGGCATTGATGAGA
TATCACCTCCACCGTCTTCAAGCAGCCCCGACGACACCACCACCCAGCTTGTTACCCTGA
AGCAGAAGCAACAGGAGGAGGATGGCTGCACGCCCCAGCAACAAGCGGCGACGACACCGG
CAGGGCGGATGCGGACGTCGGCGATGCTGATGAAGCTCATCTCGTGCGGCGCCTCCTCCA
TCAAGGAGCTGCAGGGCCAAGCACAATCACAACGCTGCCGTGCTACTGCTTGGCATAACA
ACAAGCCGGACATCATGGACCACCGTGACTACTTCAGTGGAAGCTTGCTGGACAACAACA
CAACCACCCACCCTATCGACCTCACCCTCAGGAGATCATCCTCTTGCAATGCCCACAGGG
GACAGAGTAGTAGGCTTGGCGTGGTGGATCAGGATGGCGTCCCGAGGAGGCAACAGCTGC
ACGCCAAATCGACGGCGGCGCGCATGGACAGCCCGGAGACAGATCAGATCAGATCATAGA
GGAGGGGATCAGCAAGCTAAGCTAAGCTAAGCTAATGCTCTTGTCAGGCAACTCATCCAT
CGAATGATACCAAAATGTTTCTTCTGTTACTAGTACTACACTAGTTAGTTATTTTATTTC
CCTTTTTTTTTCATTTCAACAAGTTAGTTTGTTCGTTTGAGCGCGCGATTCGATCAGTTG
GTGTGAAAACGAAAACGAAAACGATGGAACACACGTATAAAAACATCTGTGTAATCTCGT
CTTTTATTAACTTAAGGGAATCAATCAATGTCAGATG
clustalw multiple alignements is not computed in this case