cluster # 3962

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Oryza sativa
cluster # 3962 cluster # 3962 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3962#0 length = 832 sequences # 3

consensusID : consensus_3962#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 832
fasta sequence

                              [GAGCAGCCCAAAGCCCCAAACGACTGCGCGCGAGCGATAGAATGGCGCTGCGCCTCGCTGCCGTACCAGAGAGCGCCGCCGCCGACCTGAGCGCCGCCGCCAATACCCTGCCGTGCATCTCCTACCGCGACTCGATCCGGAGCGTCGCCGCCGTCGTCTCCGGCGGCCGAGGGCCTCTCTTCCAGTCCGAAGATTCCGCCTCCACCTGGTCGTCTTCCTCCTACGCGTCCGACTGCTCCGGCCACTCCTCCGGCGTCTCCGCCGCCGCGGCCGCTGGCTTCAGGGCACTCACGGCGCACGAGCTCAGGGAGGTCGCGCGTCGCATGGTCGCCGACGGCTACGCCCAGCGCATGGTCCAAGCGTTCGACGACGCGGCGACGGTCGAGGTCCTCGAGGGGGAGGTGGTTCTTCGAGCTCGACGTCGACTGGGTCCTCCGAATCCGCGAGGGGCAGGGGTTACGGCAGCTGGAGAAGTCGGCCGCCTCCTCCCCGTCGTCGTCGCCGCTGCAAGATCTGGTGGAGAGTGACAGATTATGTCTTGTTTTTACTATATATTTTTAACATCTATTTTTGAGATAATAGTTGGCTGCCTTAGGATGTAAGGCACTAGTAATTTTTTGAGATAATAGTTGGCTGCCTTAGGATGTAAGGCACTAGTAGTTTTCCTTAGGATATAAGCCACTCCTAATTTTTAGGATGTAAGCCACTAATCTATACCTTATGGTGTAAGCCACTGGCCTATATATAT-ATATCCAACCAGCC-ATAGTTGATTGAGTGG-AGAATAGA-AATTAAACTAGCCTCAAAACCGGTGTTCAAAAAAAAAAAAAAAAAA]

[+] EMBL AK119989             [GAGCAGCCCAAAGCCCCAAACGACTGCGCGCGAGCGATAGAATGGCGCTGCGCCTCGCTGCCGTACCAGAGAGCGCCGCCGCCGACCTGAGCGCCGCCGCCAATACCCTGCCGTGCATCTCCTACCGCGACTCGATCCGGAGCGTCGCCGCCGTCGTCTCCGGCGGCCGAGGGCCTCTCTTCCAGTCCGAAGATTCCGCCTCCACCTGGTCGTCTTCCTCCTACGCGTCCGACTGCTCCGGCCACTCCTCCGGCGTCTCCGCCGCCGCGGCCGCTGGCTTCAGGGCACTCACGGCGCACGAGCTCAGGGAGGTCGCGCGTCGCATGGTCGCCGACGGCTACGCCCAGCGCATGGTCCAAGCGTTCGACGACGCGGCGACGGTCGAGGTCCTCGAGGGGGAGGTGGTTCTTCGAGCTCGACGTCGACTGGGTCCTCCGAATCCGCGAGGGGCAGGGGTTACGGCAGCTGGAGAAGTCGGCCGCCTCCTCCCCGTCGTCGTCGCCGCTGCAAGATCTGGTGGAGAGTGACAGATTATGTCTTGTTTTTACTATATATTTTTAACATCTATTTTTGAGATTATAGTTGGCTGCCTTAGGATGTAAGGCACTAGTAATTTTTTGAGATAATAGTTGGCTGCCTTAGGATGTAAGGCACTAGTAGTTTTCCTTAGGATATAAGCCACTCCTAATTTTTAGGATGTAAGCCACTAATCTATACCTTATGGTGTAAGCCACTGGCCTATATATAT ATATCCAACCAGCC ATAGTTGATTGAGTGG AG                                                     ]
[+] EMBL AU091682             [                                                                                                                                                                                                                                                                                                TCACGGCGCACGAGCTCAGGGAGGTCNCGCGTCGCATGGTCGCCGACGGCTACGCCCAGCGCATGGTCCAAGCGTTCGACGACGCGGCGACGGTCGAGGTCCTCGAGGGGGAGGTGGTTCTTCGAGCTCGACGTCGACTGGGTCCTCCGAATCCGCGAGGGGCAGGGGTTACGGCAGCTNNNGAAGTCGGCCGCCTCCTCCCCGTCGTCGTCGCCGCTGCAAGATCTGGTGGAGAGTGACAGATTATGTCTTGTTTTTACTATATATTTTTAACATCTATTTTTGAGATAATAGTTGGCTGCCTTAGGATGTAAGGCACTAGTAATTTTTTGAGATAATAGTTGGCTGCCTTAGGATGTAAGGCACTAGTAGTTTTCCTTAGGATATAAGCCACTCCTAATTTTTAGGATGTAAGCCACTAATCTATACCTTATGGTGTAAGCCACTGGCCTATATATATAATATCCAACCAGCCAATAGTTGATTGAGTGGAAGAATAGAGAATTAAACTAGCCTCAAAACCGGTGTTCA                 ]
[+] EMBL AU075694             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACTATATATTTTTAACATCTATTTTTGAGATAATAGTTGGCTGCCTTAGGATGTAAGGCACTAGTAATTTTTTGAGATAATAGTTGGCTGCCTTAGGATGTAAGGCACTAGTAGTTTTCCTTAGGATATAAGCCACTCCTAATTTTTAGGNTGTAAGCCACTAATCTATACCTTATGGTGTAAGCCACTGGCCTATATATAT ATATCCAACCAGCC ATAGTTGATTGAGTGG AGAATAGA AATTAAACTAGCCTCAAAACCTGTGTTCAAAAAAAAAAAAAAAAAA]




>consensus_3962#0
GAGCAGCCCAAAGCCCCAAACGACTGCGCGCGAGCGATAGAATGGCGCTGCGCCTCGCTG
CCGTACCAGAGAGCGCCGCCGCCGACCTGAGCGCCGCCGCCAATACCCTGCCGTGCATCT
CCTACCGCGACTCGATCCGGAGCGTCGCCGCCGTCGTCTCCGGCGGCCGAGGGCCTCTCT
TCCAGTCCGAAGATTCCGCCTCCACCTGGTCGTCTTCCTCCTACGCGTCCGACTGCTCCG
GCCACTCCTCCGGCGTCTCCGCCGCCGCGGCCGCTGGCTTCAGGGCACTCACGGCGCACG
AGCTCAGGGAGGTCGCGCGTCGCATGGTCGCCGACGGCTACGCCCAGCGCATGGTCCAAG
CGTTCGACGACGCGGCGACGGTCGAGGTCCTCGAGGGGGAGGTGGTTCTTCGAGCTCGAC
GTCGACTGGGTCCTCCGAATCCGCGAGGGGCAGGGGTTACGGCAGCTGGAGAAGTCGGCC
GCCTCCTCCCCGTCGTCGTCGCCGCTGCAAGATCTGGTGGAGAGTGACAGATTATGTCTT
GTTTTTACTATATATTTTTAACATCTATTTTTGAGATAATAGTTGGCTGCCTTAGGATGT
AAGGCACTAGTAATTTTTTGAGATAATAGTTGGCTGCCTTAGGATGTAAGGCACTAGTAG
TTTTCCTTAGGATATAAGCCACTCCTAATTTTTAGGATGTAAGCCACTAATCTATACCTT
ATGGTGTAAGCCACTGGCCTATATATATATATCCAACCAGCCATAGTTGATTGAGTGGAG
AATAGAAATTAAACTAGCCTCAAAACCGGTGTTCAAAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case