cluster # 3965

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Oryza sativa
cluster # 3965 cluster # 3965 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3965#0 length = 1628 sequences # 3
consensusID : consensus_3965#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1628
fasta sequence
                              [TGAGGTGAAGGTCAGTGATGGCGTGGGGGGCTTGCGCTCTGCTCCTCCTCCTCCTGGTACTTGGTGCGGGAGGAGGAGGAGGGGTGCATTGCCTGGAGGTGACGAGGAGCAGGAGAGCCTTGCAGAGGAGGCACCACCTGAGGTCAAGAGCAGAGAGTGGCGCCACCATACTGGAGCTCAGGCACCATGGCGGCGGCGGCGGCGGCGGCTCGGGGAAGAGCGGCGGGAGGAGCAGGGAGGAGGAGCTCGGCGGCCTCTTCTCCTCCGACGCCGCGCGCGTCTCGTCGCTGCAGCGTCGCGCAGGCGGCGGGTCTTGGGCGGAGGACGAGGCGGCGGCGGCGGCGGCGACCGGGCGGGTGCCCGTCACGTCCGGGGCGAGGCTACGGACGCTGAACTACGTGGCCACCGTGGGGCTTGGCGGCGGCGAGGCGACGGTGATCGTGGACACGGCGAGCGAGCTCACCTGGGTGCAGTGCGCGCCGTGCGCGTCGTGCCACGACCAGCAGGGCCCGCTGTTCGACCCGGCGTCGTCGCCGTCCTACGCCGTGCTGCCGTGCAACTCCTCCTCCTGCGACGCGCTGCAGGTGGCCACCGGCTCGGCGGCCGGGGCGTGCGGCGGCGGCGAGCAGCCTTCCTGCAGCTACACCCTCAGCTACCGTGACGGCTCCTACTCCCAGGGCGTCCTGGCGCACGACAAGCTGAGCCTCGCCGGCGAGGTCATCGACGGCTTCGTGTTCGGCTGCGGCACCAGCAACCAGGGGCCATTCGGCGGCACCTCCGGTCTGATGGGTCTAGGCCGGAGCCAGCTCTCGCTGATATCACAAACCATGGATCAATTCGGTGGTGTCTTCTCATACTGCCTACCTCTCAAGGAGTCAGAATCATCAGGGTCTCTCGTCCTCGGCGACGACACCTCGGTGTACCGGAATTCAACCCCAATTGTGTACACAACCATGGTTTCCGACCCGGTGCAAGGGCCCTTCTACTTTGTTAACCTGACCGGGATCACCATTGGCGGCCAGGAGGTAGAATCTTCAGCTGGCAAGGTTATCGTCGACTCGGGAACGATCATCACGAGCCTCGTGCCTTCGGTGTACAATGCGGTCAAGGCAGAGTTCTTGAGCCAGTTCGCGGAGTATCCGCAAGCGCCGGGGTTCTCGATTCTTGACACTTGCTTCAACTTGACAGGGTTCAGAGAAGTGCAGATTCCTAGCCTGAAGTTTGTGTTTGAAGGCAATGTGGAGGTGGAGGTTGATTCCAGTGGAGTGCTCTACTTTGTCAGCAGTGATTCTTCTCAGGTTTGCTTGGCTCTGGCCTCCCTGAAATCTGAGTATGAAACTTCGATCATTGGTAATTACCAGCAGAAGAATCTGAGGGTCATATTTGACACTCTAGGATCTCAAATTGGATTTGCACAAGAGACTTGTGATTATATTTAACATGATTTGATTTGG-AGGG-GGAAGGGGGCCATGAGCTATGTGAATATCCCTATACCTGGAGATCTGTTTTGAGATTACTTCTGGTAATTGGCAAATGGTAGTACAGTATTAGTTATTGTCAAATGTACNAGCATCTATNATTGCTTCATTCTGTTTTTTTTTTTTTACTGCCGTTTCTTTGTGCTTTCA]

[+] EMBL AK120024             [TGAGGTGAAGGTCAGTGATGGCGTGGGGGGCTTGCGCTCTGCTCCTCCTCCTCCTGGTACTTGGTGCGGGAGGAGGAGGAGGGGTGCATTGCCTGGAGGTGACGAGGAGCAGGAGAGCCTTGCAGAGGAGGCACCACCTGAGGTCAAGAGCAGAGAGTGGCGCCACCATACTGGAGCTCAGGCACCATGGCGGCGGCGGCGGCGGCGGCTCGGGGAAGAGCGGCGGGAGGAGCAGGGAGGAGGAGCTCGGCGGCCTCTTCTCCTCCGACGCCGCGCGCGTCTCGTCGCTGCAGCGTCGCGCAGGCGGCGGGTCTTGGGCGGAGGACGAGGCGGCGGCGGCGGCGGCGACCGGGCGGGTGCCCGTCACGTCCGGGGCGAGGCTACGGACGCTGAACTACGTGGCCACCGTGGGGCTTGGCGGCGGCGAGGCGACGGTGATCGTGGACACGGCGAGCGAGCTCACCTGGGTGCAGTGCGCGCCGTGCGCGTCGTGCCACGACCAGCAGGGCCCGCTGTTCGACCCGGCGTCGTCGCCGTCCTACGCCGTGCTGCCGTGCAACTCCTCCTCCTGCGACGCGCTGCAGGTGGCCACCGGCTCGGCGGCCGGGGCGTGCGGCGGCGGCGAGCAGCCTTCCTGCAGCTACACCCTCAGCTACCGTGACGGCTCCTACTCCCAGGGCGTCCTGGCGCACGACAAGCTGAGCCTCGCCGGCGAGGTCATCGACGGCTTCGTGTTCGGCTGCGGCACCAGCAACCAGGGGCCATTCGGCGGCACCTCCGGTCTGATGGGTCTAGGCCGGAGCCAGCTCTCGCTGATATCACAAACCATGGATCAATTCGGTGGTGTCTTCTCATACTGCCTACCTCTCAAGGAGTCAGAATCATCAGGGTCTCTCGTCCTCGGCGACGACACCTCGGTGTACCGGAATTCAACCCCAATTGTGTACACAACCATGGTTTCCGACCCGGTGCAAGGGCCCTTCTACTTTGTTAACCTGACCGGGATCACCATTGGCGGCCAGGAGGTAGAATCTTCAGCTGGCAAGGTTATCGTCGACTCGGGAACGATCATCACGAGCCTCGTGCCTTCGGTGTACAATGCGGTCAAGGCAGAGTTCTTGAGCCAGTTCGCGGAGTATCCGCAAGCGCCGGGGTTCTCGATTCTTGACACTTGCTTCAACTTGACAGGGTTCAGAGAAGTGCAGATTCCTAGCCTGAAGTTTGTGTTTGAAGGCAATGTGGAGGTGGAGGTTGATTCCAGTGGAGTGCTCTACTTTGTCAGCAGTGATTCTTCTCAGGTTTGCTTGGCTCTGGCCTCCCTGAAATCTGAGTATGAAACTTCGATCATTGGTAATTACCAGCAGAAGAATCTGAGGGTCATATTTGACACTCTAGGATCTCAAATTGGATTTGCACAAGAGACTTGTGATTATATTTAACATGATTTGATTTGG AGGG GGAAGGGGGCCATGAGCTATGTGAATATCCCTATACCTGGAGATCTGTTTTGAGATTACTTCTGGTAATTGGCAAATGGTAGTACAGTATT                                                                               ]
[+] EMBL CA997961             [                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGTGATCGTGGACACTGCGAGCGAGCTCACCTGGGTGCAGTGCGCGCCGTGCGCGTCGTGCCACGACCAGCAGGGCCCGCTGTTCGACCCGGCGTTGTCTCCGTCCTACGCCGTGCTGCCGTGCAACTCCTCCTCCTGCGACGCGCTGCAGGTGGCCACCGGCTCTGCGGACGGGGCGTGCAGCGGATGAGAGCATCCTTCCTGCAGCTACACCCTCAGCTACCGTGACGGCTCCTACTCCCAGGGCGTACTGGCGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA753727             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGGTAGAATCTTCAGCTGGCAAGGTTATCGTCGACTCGGGAACGATCATCACGAGCCTCGTGCCTTCGGTGTACAATGCGGTCAAGGCAGAGTTCTTGAGCCAGTTCGCGGAGTATCCGCAAGCGCCGGGGTTCTCGATTCTTGACACTTGCTTCAACTTGACAGGGTTCAGAGAAGTGCAGATTCCTAGCCTGAAGTTTGTGTTTGAAGGCAATGTGGAGGTGGAGGTTGATTCCAGTGGAGTGCTCTACTTTGTCAGCAGTGATTCTTCTCAGGTTTGCTTGGCTCTGGCCTCCCTGAAATCTGAGTATGAAACTTCAATCATTGGTAATTACCAGCAGAAGAATCTGAGGGTCATATTTGACACTCTAGGATCTCAAATTGGATTTGCACAAGAGACTTGTGATTATATTTAACATGATTTGATTTGGNAGGGNGGAAGGGGGCCATGAGCTATGTGAATATCCCTATACCTGGAGATCTGTTTTGAGATTACTTCTGGTAATTGGCAAATGGTAGTACAGTATTAGTTATTGTCAAATGTACNAGCATCTATNATTGCTTCATTCTGTTTTTTTTTTTTTACTGCCGTTTCTTTGTGCTTTCA]




>consensus_3965#0
TGAGGTGAAGGTCAGTGATGGCGTGGGGGGCTTGCGCTCTGCTCCTCCTCCTCCTGGTAC
TTGGTGCGGGAGGAGGAGGAGGGGTGCATTGCCTGGAGGTGACGAGGAGCAGGAGAGCCT
TGCAGAGGAGGCACCACCTGAGGTCAAGAGCAGAGAGTGGCGCCACCATACTGGAGCTCA
GGCACCATGGCGGCGGCGGCGGCGGCGGCTCGGGGAAGAGCGGCGGGAGGAGCAGGGAGG
AGGAGCTCGGCGGCCTCTTCTCCTCCGACGCCGCGCGCGTCTCGTCGCTGCAGCGTCGCG
CAGGCGGCGGGTCTTGGGCGGAGGACGAGGCGGCGGCGGCGGCGGCGACCGGGCGGGTGC
CCGTCACGTCCGGGGCGAGGCTACGGACGCTGAACTACGTGGCCACCGTGGGGCTTGGCG
GCGGCGAGGCGACGGTGATCGTGGACACGGCGAGCGAGCTCACCTGGGTGCAGTGCGCGC
CGTGCGCGTCGTGCCACGACCAGCAGGGCCCGCTGTTCGACCCGGCGTCGTCGCCGTCCT
ACGCCGTGCTGCCGTGCAACTCCTCCTCCTGCGACGCGCTGCAGGTGGCCACCGGCTCGG
CGGCCGGGGCGTGCGGCGGCGGCGAGCAGCCTTCCTGCAGCTACACCCTCAGCTACCGTG
ACGGCTCCTACTCCCAGGGCGTCCTGGCGCACGACAAGCTGAGCCTCGCCGGCGAGGTCA
TCGACGGCTTCGTGTTCGGCTGCGGCACCAGCAACCAGGGGCCATTCGGCGGCACCTCCG
GTCTGATGGGTCTAGGCCGGAGCCAGCTCTCGCTGATATCACAAACCATGGATCAATTCG
GTGGTGTCTTCTCATACTGCCTACCTCTCAAGGAGTCAGAATCATCAGGGTCTCTCGTCC
TCGGCGACGACACCTCGGTGTACCGGAATTCAACCCCAATTGTGTACACAACCATGGTTT
CCGACCCGGTGCAAGGGCCCTTCTACTTTGTTAACCTGACCGGGATCACCATTGGCGGCC
AGGAGGTAGAATCTTCAGCTGGCAAGGTTATCGTCGACTCGGGAACGATCATCACGAGCC
TCGTGCCTTCGGTGTACAATGCGGTCAAGGCAGAGTTCTTGAGCCAGTTCGCGGAGTATC
CGCAAGCGCCGGGGTTCTCGATTCTTGACACTTGCTTCAACTTGACAGGGTTCAGAGAAG
TGCAGATTCCTAGCCTGAAGTTTGTGTTTGAAGGCAATGTGGAGGTGGAGGTTGATTCCA
GTGGAGTGCTCTACTTTGTCAGCAGTGATTCTTCTCAGGTTTGCTTGGCTCTGGCCTCCC
TGAAATCTGAGTATGAAACTTCGATCATTGGTAATTACCAGCAGAAGAATCTGAGGGTCA
TATTTGACACTCTAGGATCTCAAATTGGATTTGCACAAGAGACTTGTGATTATATTTAAC
ATGATTTGATTTGGAGGGGGAAGGGGGCCATGAGCTATGTGAATATCCCTATACCTGGAG
ATCTGTTTTGAGATTACTTCTGGTAATTGGCAAATGGTAGTACAGTATTAGTTATTGTCA
AATGTACNAGCATCTATNATTGCTTCATTCTGTTTTTTTTTTTTTACTGCCGTTTCTTTG
TGCTTTCA
clustalw multiple alignements is not computed in this case