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Oryza sativa
cluster # 3976 cluster # 3976       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3976#0 length = 1392 sequences # 3  
consensusID : consensus_3976#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1392
fasta sequence 
                              [TTCCTCCGAATAATTATTTATTTTATATTTACATAATTTTTTTTCCCACTCCTCTCCCTCTCCGGGCCTCCGCTCCCCGTGTCTCCCCCCACCTCGCCGACTCGCGCCTTCTAGAATCTTCGAATCGCGATCGCCTCCTCCCACCTCGGCCCAGCAACGAGCTCCCTCCCATGGTGGCCTCCAGAGGATAGCGGGAGAGATCGGAATCGTAGGGTTTTGGGGGAGGCGGCGGTGGGGGAGATGAGCGGGGAGGTGGAATGCAGAGTGTGCCACGCGAAGGTGCAGGTGCCGATGGCGGCGGCGGCGGTGTCGAAGGCGTACGACATCCACCGGAGCTCCGTGTCGTCGAGGCAGCGCGCGCTCAACGTCCTCCTCGTCTCCGGCGACTGCGTCCTCGCCGGCCTACAGCCTATATTGGTGTACATGTGTAAAGTGGATGGGAAGTTCAAATTTAGCCCAGTTAGTGTAAACTTCTTGACAGAGATTACAAAAATTATATTTGCCATCATCATGCTATGCATCCAGGCCAGGCGCCTAAAGGTGGGAGAGGAGCCATTTCACACAGTTTCAACATTCATGCAGGCTGCTCGCAACAATGTTCTTCTTGCAGTTCCTGCTCTTTTCTATGCTATCAACAATTACATGAAGTTTGTAATGCAGCTATATTTTAATCCTGCAACAGTGAAAATGTTGGGTAATCTCAAGGTTCTGGTGATTGCTGTGCTCCTAAAGGTGATAATGAGGAGGCGTTTCTCCACAATTCAGTGGGAAGCCCTTGCTCTTTTGTTGATTGGTATATCGGTTAATCAGCTCAAATCACTGCCTGAAGGTTCTAGTACACTTGGTCTTCCTGTTGCTGCTGGTGCCTACCTATACACATTATTTTTCGTAACAGTTCCTGCATTGGCTTCAGTTTACAATGAAAAGGCTCTGAAAAGCCAGTTTGATACCAGTATATATCTTCAGAACTTATTTCTGTATGGATATGGTGCAATATTTAATTTCCTAGGGCTTGTGATCACTGCCATCATCCAAGGTCCTAGTAGCTTTAATATTCTGGAAGGGCATTCAAAGGCCACAATGTTTCTTATTTGCAACAATGCCGCTCAGGGCATATTATCGTCATTTTTCTTCAAATATGCAGATACAATATTGAAGAAGTACTCATCAACAATCGCCACAATCTTTACTGGAGTAGCATCTGCTGTGTTGTTTGGTCATACTCTGACCATAAATTTTGTTCTTGCAATATCAATAGTAATTATATCTATGCATCAGTATCTCTCGAACCAAATTAAGGATGAAGTTCCGAGCAGTAAAATTGAGATGGGTGATGCTCATGAGCACAGATCGAAGGAATCTGTAGTCGTCAACGTGTCTGATTCTATTGCT]

[+] EMBL AK120093             [TTCCTCCGAATAATTATTTATTTTATATTTACATAATTTTTTTTCCCACTCCTCTCCCTCTCCGGGCCTCCGCTCCCCGTGTCTCCCCCCACCTCGCCGACTCGCGCCTTCTAGAATCTTCGAATCGCGATCGCCTCCTCCCACCTCGGCCCAGCAACGAGCTCCCTCCCATGGTGGCCTCCAGAGGATAGCGGGAGAGATCGGAATCGTAGGGTTTTGGGGGAGGCGGCGGTGGGGGAGATGAGCGGGGAGGTGGAATGCAGAGTGTGCCACGCGAAGGTGCAGGTGCCGATGGCGGCGGCGGCGGTGTCGAAGGCGTACGACATCCACCGGAGCTCCGTGTCGTCGAGGCAGCGCGCGCTCAACGTCCTCCTCGTCTCCGGCGACTGCGTCCTCGCCGGCCTACAGCCTATATTGGTGTACATGTGTAAAGTGGATGGGAAGTTCAAATTTAGCCCAGTTAGTGTAAACTTCTTGACAGAGATTACAAAAATTATATTTGCCATCATCATGCTATGCATCCAGGCCAGGCGCCTAAAGGTGGGAGAGGAGCCATTTCACACAGTTTCAACATTCATGCAGGCTGCTCGCAACAATGTTCTTCTTGCAGTTCCTGCTCTTTTCTATGCTATCAACAATTACATGAAGTTTGTAATGCAGCTATATTTTAATCCTGCAACAGTGAAAATGTTGGGTAATCTCAAGGTTCTGGTGATTGCTGTGCTCCTAAAGGTGATAATGAGGAGGCGTTTCTCCACAATTCAGTGGGAAGCCCTTGCTCTTTTGTTGATTGGTATATCGGTTAATCAGCTCAAATCACTGCCTGAAGGTTCTAGTACACTTGGTCTTCCTGTTGCTGCTGGTGCCTACCTATACACATTATTTTTCGTAACAGTTCCTGCATTGGCTTCAGTTTACAATGAAAAGGCTCTGAAAAGCCAGTTTGATACCAGTATATATCTTCAGAACTTATTTCTGTATGGATATGGTGCAATATTTAATTTCCTAGGGCTTGTGATCACTGCCATCATCCAAGGTCCTAGTAGCTTTAATATTCTGGAAGGGCATTCAAAGGCCACAATGTTTCTTATTTGCAACAATGCCGCTCAGGGCATATTATCGTCATTTTTCTTCAAATATGCAGATACAATATTGAAGAAGTACTCATCAACAATCGCCACAATCTTTACTGGAGTAGCATCTGCTGTGTTGTTTGGTCATACTCTGACCATAAATTTTGTTCTTGCAATATCAATAGTAATTATATCTATGCATCAGTATCTCTCGAACCAAATTAAGGATGAAGTTCCGAGCAGTAAAATTGAGATGGGTGATGCTCATGAGCACAGATCGAAGGAATCTGTAGTCGTCAACGTGTCTGATTCTATTGCT]
[+] EMBL CF196117             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGCCTGAAGGTTCTAGTACACTTGGTCTTCCTGTTGCTGCTGGTGCCTACCTATACACATTATTTTTCGTAACAGTTCCTGCATTGGCTTCAGTTTACAATGAAAAGGCTCTGAAAAGCCAGTTTGATACCAGTATATATCTTCAGAACTTATTTCTGTATGGATATGGTGCAATATTTAATTTCCTAGGGCTTGTGATCACTGCCATCATCCAAGGTCCTAGTAGCTTTAATATTCTGGAAGGGCATTCAAAGGCCACAATGTTTCTTATTTGCAACAATGCCGCTCAGGGCATACTATCGTCATTTTTCTTCAAATATGCAGATACAATATTGAAGAAGTACTCATCAACAATCGCCACAATCTTTACTGGAGTAGCATCTGCTGTGTTGTTTGGTCATACTCTGACCATAAATTTTGTTCTTGCAATATCAATAGTAATTATATCTATGCATCA                                                                                                                   ]
[+] EMBL CF328133             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTTATTTCTGTATGGATATGGTGCAATATTTAATTTCCTAGGGCT  TGATCACTGCCATCATCCAAGGTCCTAGTAGCTTTAATATTCTGGAAGGGCATTCAAAGGCCACAATTTTTCTTATTTGCAACAATGCCGCTCAGGGCATATTATCGTCATTTTTCTTCAAATATGCAGATACAATATTGAAGAAGTACTCATCAACAATCGCCACAATCTTTACTGGAGTAGCATCTGCTGTGTTGTTTGGTCATACTCTGACCATAAATTTTGTTCTTGCAATATCAATAGTAATTATATCTATGCATCAGTATCTCTCGAACCAAATTAAGGATGAAGTTCCGAGCAGTAAAATTGAGATGGGTGATGCTCATGAGCACAGATCGAAGGAATCTGTAGTCGTCAACGTGTCTGATTCTATTGCT]




>consensus_3976#0
TTCCTCCGAATAATTATTTATTTTATATTTACATAATTTTTTTTCCCACTCCTCTCCCTC
TCCGGGCCTCCGCTCCCCGTGTCTCCCCCCACCTCGCCGACTCGCGCCTTCTAGAATCTT
CGAATCGCGATCGCCTCCTCCCACCTCGGCCCAGCAACGAGCTCCCTCCCATGGTGGCCT
CCAGAGGATAGCGGGAGAGATCGGAATCGTAGGGTTTTGGGGGAGGCGGCGGTGGGGGAG
ATGAGCGGGGAGGTGGAATGCAGAGTGTGCCACGCGAAGGTGCAGGTGCCGATGGCGGCG
GCGGCGGTGTCGAAGGCGTACGACATCCACCGGAGCTCCGTGTCGTCGAGGCAGCGCGCG
CTCAACGTCCTCCTCGTCTCCGGCGACTGCGTCCTCGCCGGCCTACAGCCTATATTGGTG
TACATGTGTAAAGTGGATGGGAAGTTCAAATTTAGCCCAGTTAGTGTAAACTTCTTGACA
GAGATTACAAAAATTATATTTGCCATCATCATGCTATGCATCCAGGCCAGGCGCCTAAAG
GTGGGAGAGGAGCCATTTCACACAGTTTCAACATTCATGCAGGCTGCTCGCAACAATGTT
CTTCTTGCAGTTCCTGCTCTTTTCTATGCTATCAACAATTACATGAAGTTTGTAATGCAG
CTATATTTTAATCCTGCAACAGTGAAAATGTTGGGTAATCTCAAGGTTCTGGTGATTGCT
GTGCTCCTAAAGGTGATAATGAGGAGGCGTTTCTCCACAATTCAGTGGGAAGCCCTTGCT
CTTTTGTTGATTGGTATATCGGTTAATCAGCTCAAATCACTGCCTGAAGGTTCTAGTACA
CTTGGTCTTCCTGTTGCTGCTGGTGCCTACCTATACACATTATTTTTCGTAACAGTTCCT
GCATTGGCTTCAGTTTACAATGAAAAGGCTCTGAAAAGCCAGTTTGATACCAGTATATAT
CTTCAGAACTTATTTCTGTATGGATATGGTGCAATATTTAATTTCCTAGGGCTTGTGATC
ACTGCCATCATCCAAGGTCCTAGTAGCTTTAATATTCTGGAAGGGCATTCAAAGGCCACA
ATGTTTCTTATTTGCAACAATGCCGCTCAGGGCATATTATCGTCATTTTTCTTCAAATAT
GCAGATACAATATTGAAGAAGTACTCATCAACAATCGCCACAATCTTTACTGGAGTAGCA
TCTGCTGTGTTGTTTGGTCATACTCTGACCATAAATTTTGTTCTTGCAATATCAATAGTA
ATTATATCTATGCATCAGTATCTCTCGAACCAAATTAAGGATGAAGTTCCGAGCAGTAAA
ATTGAGATGGGTGATGCTCATGAGCACAGATCGAAGGAATCTGTAGTCGTCAACGTGTCT
GATTCTATTGCT

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)