cluster # 3980

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Oryza sativa
cluster # 3980 cluster # 3980 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3980#0 length = 1083 sequences # 3
consensusID : consensus_3980#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1083
fasta sequence
                              [AAAAAAATGTCTCCCCCCGCCGCCGCCGCCGCCGCCGGCGATCCGACCCCTTTCCCTCCGATAGCTAGAGTGTGGCTCAGAGTCATTTCTGCTGTGTGAATGTGCCGGCTCTAGAATGGGTCTCCTCAGCATAATCAGAAAGATCAAGCGAAAGGAGAAGAAGGTGATGAGGATTCTCATGGTTGGCCTCCACAACTAGGGTAAGACAACAATTGTGCTAAGAAAAAATGGTGATGACACCAGCGTCATTAGCCCTACACTTTGGCTTCAGGATCAAGACCATCAAGTACCACAAGTTCTCTTTGAACATATGGGATGTGGGTGGACAGAAGACAATCCGATCGTATTTGAGCAGGCTAACTGCCTGGTTTGGGTGATTGATAGTTCTGATATCCGAATGCTGAGCTCCAGAGTCTGTTGAAAGAAGAGTTGCAAGTGATTTTAGCCACTAACTCTAATTGTTAATGGCACCCAGTTTCCAAATGGTTTGTGTTTATTCTGCACCAGGAAACTGTGAAGACTGCAAAGTTTTAATTCTCAGAGCATGTTTTCCCCTTGCTGAATCTTTCTTCTGAAAGTTAGTAATCCTTGGAGCTTTGATGTCAGAGATTGGCCGGCGCATCGTTTTTCGTTTTGGCGAATAAGCAAGACAATCAAGGTGCATTGAAGCCGGCAGAAATCGCCAAGGCGGTGTATTTGGACATACACGTTGTACCGATACATCCCCGGGATTAACATAGGAGTAGAACACAGTACAAATCTTACCATCACACATTCACACTGCTAGGCCGAGCTTCTGTCGCAGAGACATCTCATGGTCATGTTCTCTGAATTGTATTATGACC-GGGCACAACAAGCGTCACCT-GGTCAGCTGTAACTCTGCTAAAATTA-GAGCAAAGAAAACATAGTTTGTGGCAATCAT-GGCTTCTAAGATTAGCAATT-TCAAAGACTGTTTCAAGTGTTGTTAAATATGGGGAAACTGGATAGATGGAGCTGTGGTTTTTGTTTGCAAGTGCTCAAGCTGGAGGCCATCGATCGCTGCCGGCATTCTCATCGACTGAAGAAAAATCTGTATTGCAAAAA]

[+] EMBL AK106567             [AAAAAAATGTCTCCCCCCGCCGCCGCCGCCGCCGCCGGCGATCCGACCCCTTTCCCTCCGATAGCTAGAGTGTGGCTCAGAGTCATTTCTGCTGTGTGAATGTGCCGGCTCTAGAATGGGTCTCCTCAGCATAATCAGAAAGATCAAGCGAAAGGAGAAGAAGGTGATGAGGATTCTCATGGTTGGCCTCCACAACTAGGGTAAGACAACAATTGTGCTAAGAAAAAATGGTGATGACACCAGCGTCATTAGCCCTACACTTTGGCTTCAGGATCAAGACCATCAAGTACCACAAGTTCTCTTTGAACATATGGGATGTGGGTGGACAGAAGACAATCCGATCGTATTTGAGCAGGCTAACTGCCTGGTTTGGGTGATTGATAGTTCTGATATCCGAATGCTGAGCTCCAGAGTCTGTTGAAAGAAGAGTTGCAAGTGATTTTAGCCACTAACTCTAATTGTTAATGGCACCCAGTTTCCAAATGGTTTGTGTTTATTCTGCACCAGGAAACTGTGAAGACTGCAAAGTTTTAATTCTCAGAGCATGTTTTCCCCTTGCTGAATCTTTCTTCTGAAAGTTAGTAATCCTTGGAGCTTTGATGTCAGAGATTGGCCGGCGCATCGTTTTTCGTTTTGGCGAATAAGCAAGACAATCAAGGTGCATTGAAGCCGGCAGAAATCGCCAAGGCGGTGTATTTGGACATACACGTTGTACCGATACATCCCCGGGATTAACATAGGAGTAGAACACAGTACAAATCTTACCATCACACATTCACACTGCTAGGCCGAGCTTCTGTCGCAGAGACATCTCATGGTCATGTTCTCTGAATTGTATTATGACC GGGCACAACAAGCGTCACCT GGTCAGCTGTAACTCTGCTAAAATTA GAGCAAAGAAAACAT                                                                                                                                                                                   ]
[+] EMBL AU162329             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCACCAGGAAACTGTGAAGACTGCAAAGTTTTAATTCTCAGAGCATGTTTTCCCCTTGCTGAATCTTTCTTCTGAAAGTTAGTAATCCTTGGAGCTTTGATGTCAGAGATTGGCCGGCGCATCGTTTTTCGTTTTGGCGAATAAGCAAGACAATCAAGGTGCATTGAAGCCGGCAGAAATCGCCAAGGCGGTGTATTTGGACATACACGTTGTACCGATACATCCCCGGGATTAACATAGGAGTAGAACACAGTACAAATCTTACCATCACACATTCACACTGCTAGGCCGAGCTTCTGTCGCAGAGACATCTCATGGTCATGTTCTCTGAATTGTATTATGACCGGGGNACAACAAGCGTCACCTGGGTCAGCTGNAACTCTGCTAAAATTAGGAGCANAGAAAACATAGTTTGTGGCAATCATGGGCTTCTAAGATTAGCAATTNTCAAAGAC                                                                                                                                     ]
[+] EMBL AU031114             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTGCATTGAAGCCGGCAGAAATCGCCAAGGCGGTGTATTTGGACATACACGTTGTACCGATACATCCCCGGGATTNACATAGGAGTAGAACACAGTACAAATCTTACCATCACACATTCACACTGCTAGGCCGAGCTTCTGTCGCAGAGACATCTCATGGTCATGTTCTCTGAATTGTATTATGACC GGGCACAACAAGCGTCACCT GGTCAGCTGTAACTCTGCTAAAATTA GAGCAAAGAAAACATAGTTTGTGGCAATCAT GGCTTCTAAGATTAGCAATT GCAAAGACTGTTTCAAGTGTTGTTAAATATGGGGAAACTGGATAGATGGAGCTGTGGTTTTTGTTTGCAAGTGCTCAAGCTGGAGGCCATCGATCGCTGCCGGCATTCTCATCGACTGAAGAAAAATCTGTATTGCAAAAA]




>consensus_3980#0
AAAAAAATGTCTCCCCCCGCCGCCGCCGCCGCCGCCGGCGATCCGACCCCTTTCCCTCCG
ATAGCTAGAGTGTGGCTCAGAGTCATTTCTGCTGTGTGAATGTGCCGGCTCTAGAATGGG
TCTCCTCAGCATAATCAGAAAGATCAAGCGAAAGGAGAAGAAGGTGATGAGGATTCTCAT
GGTTGGCCTCCACAACTAGGGTAAGACAACAATTGTGCTAAGAAAAAATGGTGATGACAC
CAGCGTCATTAGCCCTACACTTTGGCTTCAGGATCAAGACCATCAAGTACCACAAGTTCT
CTTTGAACATATGGGATGTGGGTGGACAGAAGACAATCCGATCGTATTTGAGCAGGCTAA
CTGCCTGGTTTGGGTGATTGATAGTTCTGATATCCGAATGCTGAGCTCCAGAGTCTGTTG
AAAGAAGAGTTGCAAGTGATTTTAGCCACTAACTCTAATTGTTAATGGCACCCAGTTTCC
AAATGGTTTGTGTTTATTCTGCACCAGGAAACTGTGAAGACTGCAAAGTTTTAATTCTCA
GAGCATGTTTTCCCCTTGCTGAATCTTTCTTCTGAAAGTTAGTAATCCTTGGAGCTTTGA
TGTCAGAGATTGGCCGGCGCATCGTTTTTCGTTTTGGCGAATAAGCAAGACAATCAAGGT
GCATTGAAGCCGGCAGAAATCGCCAAGGCGGTGTATTTGGACATACACGTTGTACCGATA
CATCCCCGGGATTAACATAGGAGTAGAACACAGTACAAATCTTACCATCACACATTCACA
CTGCTAGGCCGAGCTTCTGTCGCAGAGACATCTCATGGTCATGTTCTCTGAATTGTATTA
TGACCGGGCACAACAAGCGTCACCTGGTCAGCTGTAACTCTGCTAAAATTAGAGCAAAGA
AAACATAGTTTGTGGCAATCATGGCTTCTAAGATTAGCAATTTCAAAGACTGTTTCAAGT
GTTGTTAAATATGGGGAAACTGGATAGATGGAGCTGTGGTTTTTGTTTGCAAGTGCTCAA
GCTGGAGGCCATCGATCGCTGCCGGCATTCTCATCGACTGAAGAAAAATCTGTATTGCAA
AAA
clustalw multiple alignements is not computed in this case