cluster # 3982

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Oryza sativa
cluster # 3982 cluster # 3982 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3982#0 length = 2110 sequences # 3
consensusID : consensus_3982#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2110
fasta sequence
                              [CGTCACCGCCTCATTCTTTCCGATCCTCCGCGCCGCGCTGCTCGGTGCTCCGCCGCCGCCGCCGCCGCCGCCGCTCACCGCAACGAGCATACTACCGCCTCTCTTCCTCGTCGTGCCCTAGTGGGAACTGGGAACCCCCGCCGCGCCCAGCTGGAGGTAGAAAATCTCTCTTGGAAGATGGTTCAACTCTTTTTTCAAGGGACCACAGATGGTGGTAGTGTTGATACAGATGCTGTAAAAGCAAGGCGATCTCTTCTTGGCAAGGTGGAGCCTATAATCAGGTCGGTTATAAAGTCTGGAGGTGGGTATGAGGCTCGGATGTGGCTCTGCAGTACGGTCTCATCCATTCATTTGCTCGACCCATATGGCCAGCGGGACCTGTTTCTCAATCTCTTGGGGATGAAAAATTCCAAACGGGATGTCGCTGCCCGCTTGCTGCGGATGATTTTTGACAAAAAGCCCAAAAAAGCAGGTTCTATTATAGCAAAGAAATGCCAGATGCTAGAGGACTTCTTCCAAGGGAATCCAAAGCAGATAATGCAGTGGTTTGGTCACTTTGCGGTTACTG--GAGTTGACACATAAGAAGGGTGCTAGGGCACTTTCTCAATTTGCATTTGTGAATCGTGATATTTGTTGGGAAGAGCTTGAGTGGAAAGGCAAGCATGGGCAGTCTCCTGCTGTTGTTGCTACTAAGCCCCATTATTTTCGTGATCTCGATGTTCTGCGGACTGTGGAAAATTTCCTGGAGTATGTCCCAGACTTCTGGTCTTCTGAAGAGCTTGCTGATTCCGTCAAAGACGGTGAAATACTGCAAATTGACACAGAATATTTTGTAGATCAATTCGTTTACTTGATGTATGAGGAGAATTCCAGAGATGCATGGCAGTTAGTTGATGAATTTTTGATGGACGAGCAGTTTTCTTCTCTTTCTCAACATCTTCTTATTCATTTAGATGAACAAAGGCTTCTTAATTTCTTGAGAGCTTTGGGGAAGTTGATCAAGCTGAATTCACAGTGCAAGGAAATGGTGTTCCCATGCTGTTGGCTTGAGGTTCTTTTGTCAGCACACAGTGATCACATATCTCTTGATGAACTTGTGCTATTGAACTGTGTCATTTCTAAGGGCAGACAACTTTGGCGCCTCATGAATGATGAAGAACAAGAGGAAGAACAAGGACAGATGCAAGAGCTTCTGAAGAGCACTAATCAATTGACTGATGCTGATCATTTTGCTCTCATGAAGGGATTTGTGGATACAGAACTTCCGGACGCACTTAAGTGGATAGGCATCCAGTCCTGGCTAGTTTTCTGTGAATTGTCAAAAGGGTGCAAATCAGCTGATTCTTGTGAGCATCTGTTCACTTGTAACAGAATAGAATTTCGCAAGGCTGATGATTACCCATTGGTCCAAAATGATGGGAACTCAATTGCACTAGACAGTGATGATGAGGATCTCATAAGAGGTAGCCATAAAAGGAGAAAGAGAGATCGGAAGAGAAAGCGACGGAGATATGATTCTGACGAGGACGATCTTGATCAGCTGCTTGAACTTGGTACCTCCAATAGGAGGGGCATTGAATCGCACCATGGATGTTGGTATCTTTCAACTGATGGCTTTTCTGCTTCATGGGACATTGCAGACATACCAGATCACCTTTCCTCTCATTATCTAAAAACA-TGGCTAAAGTTTGCTTGCTTTAGATGATCCTCACAACATGAGTTCAACAACCCACCAGTTTTCGGGTGAATTCATGGGGTCATGGAGATGTATGTACAGGCTTCGCTCTGTTTTCCAACCTCAGATGCGCATCTTTAGGCCATGAATTCTGAGAATTCATGCATTTCTGGACGTGCTAGCCGCTGCTACATGACCAAAGTACCGTGCTGGTTGATTCCATTGAAAAATTACAGGCTAGGACACTGAATTGGCA-GGTTTCACTGGAAAGCGGAAAGTGAAAATACATCTGAATGTTGTAAGACTTGACTAGAGCTGTTAAAAGTTGTATGCCCCGGTCTGCGGGCCTTACCGCCTTATGCTGTAGTTCGCAGCTGGTGACTTAAGAATTTTGATCGACCTTTTTCTACATGAAAATTGGTTGCTGTTAAAAAA]

[+] EMBL AK072393             [CGTCACCGCCTCATTCTTTCCGATCCTCCGCGCCGCGCTGCTCGGTGCTCCGCCGCCGCCGCCGCCGCCGCCGCTCACCGCAACGAGCATACTACCGCCTCTCTTCCTCGTCGTGCCCTAGTGGGAACTGGGAACCCCCGCCGCGCCCAGCTGGAGGTAGAAAATCTCTCTTGGAAGATGGTTCAACTCTTTTTTCAAGGGACCACAGATGGTGGTAGTGTTGATACAGATGCTGTAAAAGCAAGGCGATCTCTTCTTGGCAAGGTGGAGCCTATAATCAGGTCGGTTATAAAGTCTGGAGGTGGGTATGAGGCTCGGATGTGGCTCTGCAGTACGGTCTCATCCATTCATTTGCTCGACCCATATGGCCAGCGGGACCTGTTTCTCAATCTCTTGGGGATGAAAAATTCCAAACGGGATGTCGCTGCCCGCTTGCTGCGGATGATTTTTGACAAAAAGCCCAAAAAAGCAGGTTCTATTATAGCAAAGAAATGCCAGATGCTAGAGGACTTCTTCCAAGGGAATCCAAAGCAGATAATGCAGTGGTTTGGTCACTTTGCGGTTACTG  GAGTTGACACATAAGAAGGGTGCTAGGGCACTTTCTCAATTTGCATTTGTGAATCGTGATATTTGTTGGGAAGAGCTTGAGTGGAAAGGCAAGCATGGGCAGTCTCCTGCTGTTGTTGCTACTAAGCCCCATTATTTTCGTGATCTCGATGTTCTGCGGACTGTGGAAAATTTCCTGGAGTATGTCCCAGACTTCTGGTCTTCTGAAGAGCTTGCTGATTCCGTCAAAGACGGTGAAATACTGCAAATTGACACAGAATATTTTGTAGATCAATTCGTTTACTTGATGTATGAGGAGAATTCCAGAGATGCATGGCAGTTAGTTGATGAATTTTTGATGGACGAGCAGTTTTCTTCTCTTTCTCAACATCTTCTTATTCATTTAGATGAACAAAGGCTTCTTAATTTCTTGAGAGCTTTGGGGAAGTTGATCAAGCTGAATTCACAGTGCAAGGAAATGGTGTTCCCATGCTGTTGGCTTGAGGTTCTTTTGTCAGCACACAGTGATCACATATCTCTTGATGAACTTGTGCTATTGAACTGTGTCATTTCTAAGGGCAGACAACTTTGGCGCCTCATGAATGATGAAGAACAAGAGGAAGAACAAGGACAGATGCAAGAGCTTCTGAAGAGCACTAATCAATTGACTGATGCTGATCATTTTGCTCTCATGAAGGGATTTGTGGATACAGAACTTCCGGACGCACTTAAGTGGATAGGCATCCAGTCCTGGCTAGTTTTCTGTGAATTGTCAAAAGGGTGCAAATCAGCTGATTCTTGTGAGCATCTGTTCACTTGTAACAGAATAGAATTTCGCAAGGCTGATGATTACCCATTGGTCCAAAATGATGGGAACTCAATTGCACTAGACAGTGATGATGAGGATCTCATAAGAGGTAGCCATAAAAGGAGAAAGAGAGATCGGAAGAGAAAGCGACGGAGATATGATTCTGACGAGGACGATCTTGATCAGCTGCTTGAACTTGGTACCTCCAATAGGAGGGGCATTGAATCGCACCATGGATGTTGGTATCTTTCAACTGATGGCTTTTCTGCTTCATGGGACATTGCAGACATACCAGATCACCTTTCCTCTCATTATCTAAAAACA TGGCTAAAGTTTGCTTGCTTTAGATGATCCTCACAACATGAGTTCAACAACCCACCAGTTTTCGGGTGAATTCATGGGGTCATGGAGATGTATGTACAGGCTTCGCTCTGTTTTCCAACCTCAGATGCGCATCTTTAGGCCATGAATTCTGAGAATTCATGCATTTCTGGACGTGCTAGCCGCTGCTACATGACCAAAGTACCGTGCTGGTTGATTCCATTGAAAAATTACAGGCTAGGACACTGAATTGGCA GGTTTCACTGGAAAGCGGAAAGTGAAAATACATCTGAATGTTGTAAGACTTGACTAGAGCTGTTAAAAGTTGTATGCCCCGGTCTGCGGGCCTTACCGCCTTATGCTGTAGTTCGCAGCTGGTGACTTAAGAATTTTGATCGACCTTTTTCTACATGAAAATTGGTTGC          ]
[+] EMBL CA766131             [                                                                                                                                                                                                                                                                                                                                                                                                     TCTCTTGGGGATGAAAAATTCCAAACGGGATGTCGCTGCCCGCTTGCTGCGGATGATTTTTGACAAAAAGCCCAAAAAAGCAGGTTCTATTATAGCAAAGAAATGCCAGATGCTACAGGACTTCTTCCAAGGGAATCCAAAGCAGATAATGCAGTGGTTTGGTCACTTTGCGGTTACTGGTGAATTGACACATAAGAAGGGTGCTAGGGCACTTTCTCAATTTGCATTTGTGAATCGTGATATTTGTTGGGAAGAGCTTGAGTGGAAAGGCAAGCATGGGCAGTCTCCTGCTGTTGTTGCTACTAAGCCCCATTATTTTCGTGATCTCGATGTTCTGCAGACTGTGGAAAATTTCCTGGAGTATGTCCCAGACTTCTGGTCTTCTGAAGAGCTTGCTGATTCCGTCAAAGACGGTGAAATACTGCAAATTGACACAGAATATTTTGTAGATCAATTCGTTTACTTGATGTATGAGGAGAATTCCAGAGATGCATGGCAGTTAGTTGATGAATTTTTGATGGACGAGCAGTTTTCTTCTCTTTCTCAACATCTTCTTATTCATTTAGATGAACAAAGGCTTCTTAATTTCTTGAGAGCTTTGGGGAAGTTGATCAAGCTGAATTCACAGTGCAAGGAAATGGTGTTCCCATGCTGNTGGCTTGAGGTTCTTTTGTCAGCACACAGTGATCACATATCTCTTGATGAACTTGTGCTATTGAACTGNGTCATTTCTGANGGCAGACAACTTTGGCGCCTCATGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM038766             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTTTCTGCTTCATGGGACATTCCAGACATACCAGATCACCTTTCCTCTCATTATCTAAAAACACTGGCTAAAGTTTGCTTGCTTTAGATGATCCTCACAACATGAGTTCAAC ACCCACCAGTTTTCGGGTGAATTCATGGGGTCATGGAGATGTATGTACAGGCTTCGCTCTGTTTTCCAACCTCAGATGCGCATCTTTAGGCCATGAATTCTGAGAATTCATGCATTTCTGGACGTGCTAGCCGCTGCTGCATGACCCAAGTACCGTGCTGGTTGATTCCCTTGAAAAATTACAGGCTAGGACCCTGAATTGGCACGGTTTCACTGGAAAGCGGAAAGTGAAAATACATCTGAATGTTGTAAGACTTGACTAGAGCTGTTAAAAGTTGTATGCCCCGGTCTGCGGCCCTTACC CCTTATGCTGTAGTTC CAGCTGGTGACTTAAGAATTTTGATCGACCTTTTTCTACATGAAAATTGGTTGCTGTTAAAAAA]




>consensus_3982#0
CGTCACCGCCTCATTCTTTCCGATCCTCCGCGCCGCGCTGCTCGGTGCTCCGCCGCCGCC
GCCGCCGCCGCCGCTCACCGCAACGAGCATACTACCGCCTCTCTTCCTCGTCGTGCCCTA
GTGGGAACTGGGAACCCCCGCCGCGCCCAGCTGGAGGTAGAAAATCTCTCTTGGAAGATG
GTTCAACTCTTTTTTCAAGGGACCACAGATGGTGGTAGTGTTGATACAGATGCTGTAAAA
GCAAGGCGATCTCTTCTTGGCAAGGTGGAGCCTATAATCAGGTCGGTTATAAAGTCTGGA
GGTGGGTATGAGGCTCGGATGTGGCTCTGCAGTACGGTCTCATCCATTCATTTGCTCGAC
CCATATGGCCAGCGGGACCTGTTTCTCAATCTCTTGGGGATGAAAAATTCCAAACGGGAT
GTCGCTGCCCGCTTGCTGCGGATGATTTTTGACAAAAAGCCCAAAAAAGCAGGTTCTATT
ATAGCAAAGAAATGCCAGATGCTAGAGGACTTCTTCCAAGGGAATCCAAAGCAGATAATG
CAGTGGTTTGGTCACTTTGCGGTTACTGGAGTTGACACATAAGAAGGGTGCTAGGGCACT
TTCTCAATTTGCATTTGTGAATCGTGATATTTGTTGGGAAGAGCTTGAGTGGAAAGGCAA
GCATGGGCAGTCTCCTGCTGTTGTTGCTACTAAGCCCCATTATTTTCGTGATCTCGATGT
TCTGCGGACTGTGGAAAATTTCCTGGAGTATGTCCCAGACTTCTGGTCTTCTGAAGAGCT
TGCTGATTCCGTCAAAGACGGTGAAATACTGCAAATTGACACAGAATATTTTGTAGATCA
ATTCGTTTACTTGATGTATGAGGAGAATTCCAGAGATGCATGGCAGTTAGTTGATGAATT
TTTGATGGACGAGCAGTTTTCTTCTCTTTCTCAACATCTTCTTATTCATTTAGATGAACA
AAGGCTTCTTAATTTCTTGAGAGCTTTGGGGAAGTTGATCAAGCTGAATTCACAGTGCAA
GGAAATGGTGTTCCCATGCTGTTGGCTTGAGGTTCTTTTGTCAGCACACAGTGATCACAT
ATCTCTTGATGAACTTGTGCTATTGAACTGTGTCATTTCTAAGGGCAGACAACTTTGGCG
CCTCATGAATGATGAAGAACAAGAGGAAGAACAAGGACAGATGCAAGAGCTTCTGAAGAG
CACTAATCAATTGACTGATGCTGATCATTTTGCTCTCATGAAGGGATTTGTGGATACAGA
ACTTCCGGACGCACTTAAGTGGATAGGCATCCAGTCCTGGCTAGTTTTCTGTGAATTGTC
AAAAGGGTGCAAATCAGCTGATTCTTGTGAGCATCTGTTCACTTGTAACAGAATAGAATT
TCGCAAGGCTGATGATTACCCATTGGTCCAAAATGATGGGAACTCAATTGCACTAGACAG
TGATGATGAGGATCTCATAAGAGGTAGCCATAAAAGGAGAAAGAGAGATCGGAAGAGAAA
GCGACGGAGATATGATTCTGACGAGGACGATCTTGATCAGCTGCTTGAACTTGGTACCTC
CAATAGGAGGGGCATTGAATCGCACCATGGATGTTGGTATCTTTCAACTGATGGCTTTTC
TGCTTCATGGGACATTGCAGACATACCAGATCACCTTTCCTCTCATTATCTAAAAACATG
GCTAAAGTTTGCTTGCTTTAGATGATCCTCACAACATGAGTTCAACAACCCACCAGTTTT
CGGGTGAATTCATGGGGTCATGGAGATGTATGTACAGGCTTCGCTCTGTTTTCCAACCTC
AGATGCGCATCTTTAGGCCATGAATTCTGAGAATTCATGCATTTCTGGACGTGCTAGCCG
CTGCTACATGACCAAAGTACCGTGCTGGTTGATTCCATTGAAAAATTACAGGCTAGGACA
CTGAATTGGCAGGTTTCACTGGAAAGCGGAAAGTGAAAATACATCTGAATGTTGTAAGAC
TTGACTAGAGCTGTTAAAAGTTGTATGCCCCGGTCTGCGGGCCTTACCGCCTTATGCTGT
AGTTCGCAGCTGGTGACTTAAGAATTTTGATCGACCTTTTTCTACATGAAAATTGGTTGC
TGTTAAAAAA
clustalw multiple alignements is not computed in this case