cluster # 4

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Oryza sativa
cluster # 4 cluster # 4 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4#0 length = 2318 sequences # 2
consensusID : consensus_4#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2318
fasta sequence
                              [CATCTGCAACCCGTCGAGTCCAACCCGCCGCCGGTCCGCCGCCATCCCGCCGTCTCTCTCCCCACCACCGCGCCGCCATGTCCGCCGCCGCCGCCGCCCTCCGGCCGACCGAGCCGCTCCCCCTCCCGAGCGGCCTCTCCCTCGCGCCGCGCCTCAAGCTGCTCCTCACCTTCTTCCGCGCCGACCTCTCCGTCCGCCCCGTCGACGAGTGGCAGCTCAAGACCGCGCTCCTCGCCTTCCTCCGCGACCCGCCCCTCTCCCTCCCCGTCCTCCCCGACTCCGACCTCTCCGTGCGCACCCTCCCCGACCTGCATAAGCGCCGCCGCGACGAGCCCGTCGCCTCGGGCGTCCTCCACGTCCGCGACCTCTCCTTCCTCCGCCCACGCCGCCGCAACGGGGATGATGAGGAGGAGGAGGCCGAGGAGATGACCCGTGAGCAGGAGGAGGAGAAGTACTTCCAGTGGAGGAGCTCCCTGGTCGAGAAGCTGGCCGGGATCGAGCTCAACCTCGAGGGGGTTAAGTTTCGGATGAGCGTCGAGATCCCGCCCTCCGATGACTTCAGGGCAATGAAGAAGTCTTGGGAGAATTTCTACGCCTCCGAGCTCCTCAGTAGCAGTATGGGATTCATTTTTTTAAATGAAAATGCTGCTCTTAGTTGTGATTCTTGCTAGGTGGAGTTTGAATTGATGTTTGCTTTGCTCAGGGAATCCTGTGAGGAAGATAGCGAAAAGGCCAGACACCATTCTTGTCCGGGGTGTGCCATCCAGGTGGTTTGCGGAGACGAGGATATCATCGAAAGCCTCCACGCTGGTCACACACACTATTTTCTCGGCACTTGGTAAAATAAGGTGCATTTTGGTGTTCTCAACTTCTGTTTGGTTCATTATATTGTAAATGCATTCATATCTCTGGGATACAAGGCAGAATATTAGTGCCGGACGTAAGCTAATAAAAGCGAAAAGAGTCCTAAACTTAGTTGACATGAGCATCCATAAGGAAATTGTTTGATTCAGTTTTGTTCAATGTCCATCCTGGTGGTTTCCTATTTTGTTTGTGGACTCATATTTTGTTCTTACTTGCCTTCCCATTCCGGTATACACACCTTTTGAGAGCTTAATATGCGCATTAAAATTAGCACCACCTGAAACCTGAAGGTCTGCCCTGTCTAGTTGGTTTTCATCCACATATAAGTTTCTTCTCACTCATATCGCTTCTTATATTTTGAAATCTATGATCTGATTCTCCAAGATAGCAATTAAACTCAGCAAAAACCAGTTCATACAGTTTCTGATGTTAGTGTGGTAGCTTAGGTGAATGTGTTAGCTATGTTCAAAATTCATAATAAAGAAGCTTGGGAAGTAACATGGGTAAAATAAATTTCTTTAGTAGTATTAGATATTGCACGCATAAAATCCATGTCACACAAAACAACATACGACATAACCCTAGTGCATCAAGCACAATAATGGAGTAATGTCTATTGTATACATGTGACTTCTTTAAATAACACTGCACCCAATTTCTTTTAAATTCTGCAGGTTATGAACTGCCCTTCACATTTTGGGGAACTTACTCCGCATACCCTTTTCTTTGGCATTCTTCTGCCAATTTTCAGGAACCTTAATATTTCTAGTGATGATGAATGGGGAGCAAAACAAGACGGAACCAATAAGGAGATTATATCTGGACTAAATTGCAAAGTGTGGGTGCAATTTGAGAACTACGACGATTTCAACAGTGCAATGCAGGCATTATGTGGACGTTCATTAGAAAAAGAAGGATCACGGTTGAAGGTAGACTATGAAGTAACTTGGGATCATGAAGGTTTCTTCCGCAATGCACAATACGAGCCTGTTCGCAGCAATTTAGAAGAGAGAAATTCATCGGCTCATGGAAGGAAGAAACATTACACATCGCGAATTGAGTCAGATCATAGAAAGAGATTTAGGGATTGATGGATATAGGGCATGGCATGATGGT-GGGATTACTTGGTTCCAAGGACA-GGGAAAATGATTGTACTGTATCATTCTGTTGTTTCATCATTAGTCTAACAGTAAAGTCTTTCTGAATTAGGTATTGCGTAGTTATTACTATTAGCCTATGTCCTGGTTGATTCCCAGAGATCATCACAACACAGTCTTGCTTGTGATTTGTAAAAGAATTTGCACTGTTGGCATCTCAATGTATGCTCATTCATTGTTCAATCACAAACTCACAATTTTGCTGAATGAGAAATTGCAATGGCTAAGATCAGCCTAAGCCTGCAAATTCTAAGCATAACTGTTTGTATTGGTTAAAAGTCAGATAATGTGAATTGA]

[+] EMBL AK069212             [CATCTGCAACCCGTCGAGTCCAACCCGCCGCCGGTCCGCCGCCATCCCGCCGTCTCTCTCCCCACCACCGCGCCGCCATGTCCGCCGCCGCCGCCGCCCTCCGGCCGACCGAGCCGCTCCCCCTCCCGAGCGGCCTCTCCCTCGCGCCGCGCCTCAAGCTGCTCCTCACCTTCTTCCGCGCCGACCTCTCCGTCCGCCCCGTCGACGAGTGGCAGCTCAAGACCGCGCTCCTCGCCTTCCTCCGCGACCCGCCCCTCTCCCTCCCCGTCCTCCCCGACTCCGACCTCTCCGTGCGCACCCTCCCCGACCTGCATAAGCGCCGCCGCGACGAGCCCGTCGCCTCGGGCGTCCTCCACGTCCGCGACCTCTCCTTCCTCCGCCCACGCCGCCGCAACGGGGATGATGAGGAGGAGGAGGCCGAGGAGATGACCCGTGAGCAGGAGGAGGAGAAGTACTTCCAGTGGAGGAGCTCCCTGGTCGAGAAGCTGGCCGGGATCGAGCTCAACCTCGAGGGGGTTAAGTTTCGGATGAGCGTCGAGATCCCGCCCTCCGATGACTTCAGGGCAATGAAGAAGTCTTGGGAGAATTTCTACGCCTCCGAGCTCCTCAGTAGCAGTATGGGATTCATTTTTTTAAATGAAAATGCTGCTCTTAGTTGTGATTCTTGCTAGGTGGAGTTTGAATTGATGTTTGCTTTGCTCAGGGAATCCTGTGAGGAAGATAGCGAAAAGGCCAGACACCATTCTTGTCCGGGGTGTGCCATCCAGGTGGTTTGCGGAGACGAGGATATCATCGAAAGCCTCCACGCTGGTCACACACACTATTTTCTCGGCACTTGGTAAAATAAGGTGCATTTTGGTGTTCTCAACTTCTGTTTGGTTCATTATATTGTAAATGCATTCATATCTCTGGGATACAAGGCAGAATATTAGTGCCGGACGTAAGCTAATAAAAGCGAAAAGAGTCCTAAACTTAGTTGACATGAGCATCCATAAGGAAATTGTTTGATTCAGTTTTGTTCAATGTCCATCCTGGTGGTTTCCTATTTTGTTTGTGGACTCATATTTTGTTCTTACTTGCCTTCCCATTCCGGTATACACACCTTTTGAGAGCTTAATATGCGCATTAAAATTAGCACCACCTGAAACCTGAAGGTCTGCCCTGTCTAGTTGGTTTTCATCCACATATAAGTTTCTTCTCACTCATATCGCTTCTTATATTTTGAAATCTATGATCTGATTCTCCAAGATAGCAATTAAACTCAGCAAAAACCAGTTCATACAGTTTCTGATGTTAGTGTGGTAGCTTAGGTGAATGTGTTAGCTATGTTCAAAATTCATAATAAAGAAGCTTGGGAAGTAACATGGGTAAAATAAATTTCTTTAGTAGTATTAGATATTGCACGCATAAAATCCATGTCACACAAAACAACATACGACATAACCCTAGTGCATCAAGCACAATAATGGAGTAATGTCTATTGTATACATGTGACTTCTTTAAATAACACTGCACCCAATTTCTTTTAAATTCTGCAGGTTATGAACTGCCCTTCACATTTTGGGGAACTTACTCCGCATACCCTTTTCTTTGGCATTCTTCTGCCAATTTTCAGGAACCTTAATATTTCTAGTGATGATGAATGGGGAGCAAAACAAGACGGAACCAATAAGGAGATTATATCTGGACTAAATTGCAAAGTGTGGGTGCAATTTGAGAACTACGACGATTTCAACAGTGCAATGCAGGCATTATGTGGACGTTCATTAGAAAAAGAAGGATCACGGTTGAAGGTAGACTATGAAGTAACTTGGGATCATGAAGGTTTCTTCCGCAATGCACAATACGAGCCTGTTCGCAGCAATTTAGAAGAGAGAAATTCATCGGCTCATGGAAGGAAGAAACATTACACATCGCGAATTGAGTCAGATCATAGAAAGAGATTTAGGGATTGATGGATATAGGGCATGGCATGATGGT GGGATTACTTGGTTCCAAGGACA GGGAAAATGATTGTACTGTATCATTCTGTTGTTTCATCATTAGTCTAACAGTAAAGTCTTTCTGAATTAGGTATTGCGTAGTTATTACTATTAGCCTATGTCCTGGTTGATTCCCAGAGATCATCACAACACAGTCTTGCTTGTGATTTGTAAAAGAATTTGCACTGTTGGCATCTCAATGTATGCTCATTCATTGTTCAATCACAAACTCACAATTTTGCTGAATGAGAAATTGCAATGGCTAAGATCAGCCTAAGCCTGCAAATTCTAAGCATAACTGTTTGTATTGGTTAAAAGTCAGATAATGTGAATTGA]
[+] EMBL C27412               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GTGCAATTTGAGAACTACGACGATTTCAACAGTGCAATGCAGGCATTATGTGGACGTTCATTAGAAAAAGAAGGATCACGGTTGAAGGTAGACTATGAAGTAACTTGGGATCATGAAGGTTTCTTCCGCAATGCACAATACGAGCCTGTTCGCAGCAATTTAGAAGAGAGAAATTCATCGGCTCATGGAAGGAAGAAACATTACACATCGCGAATTGAGTCAGATCATAGAAAGAGATTTAGGGATTGATGGATATAGGGCATGGCATGATGGTGGGGATTACTTGGTTCCAAGGACAGGGGAAAATGATTGTACTGTATCATTCTGTTGTTTCATCA                                                                                                                                                                                                                                                                                    ]




>consensus_4#0
CATCTGCAACCCGTCGAGTCCAACCCGCCGCCGGTCCGCCGCCATCCCGCCGTCTCTCTC
CCCACCACCGCGCCGCCATGTCCGCCGCCGCCGCCGCCCTCCGGCCGACCGAGCCGCTCC
CCCTCCCGAGCGGCCTCTCCCTCGCGCCGCGCCTCAAGCTGCTCCTCACCTTCTTCCGCG
CCGACCTCTCCGTCCGCCCCGTCGACGAGTGGCAGCTCAAGACCGCGCTCCTCGCCTTCC
TCCGCGACCCGCCCCTCTCCCTCCCCGTCCTCCCCGACTCCGACCTCTCCGTGCGCACCC
TCCCCGACCTGCATAAGCGCCGCCGCGACGAGCCCGTCGCCTCGGGCGTCCTCCACGTCC
GCGACCTCTCCTTCCTCCGCCCACGCCGCCGCAACGGGGATGATGAGGAGGAGGAGGCCG
AGGAGATGACCCGTGAGCAGGAGGAGGAGAAGTACTTCCAGTGGAGGAGCTCCCTGGTCG
AGAAGCTGGCCGGGATCGAGCTCAACCTCGAGGGGGTTAAGTTTCGGATGAGCGTCGAGA
TCCCGCCCTCCGATGACTTCAGGGCAATGAAGAAGTCTTGGGAGAATTTCTACGCCTCCG
AGCTCCTCAGTAGCAGTATGGGATTCATTTTTTTAAATGAAAATGCTGCTCTTAGTTGTG
ATTCTTGCTAGGTGGAGTTTGAATTGATGTTTGCTTTGCTCAGGGAATCCTGTGAGGAAG
ATAGCGAAAAGGCCAGACACCATTCTTGTCCGGGGTGTGCCATCCAGGTGGTTTGCGGAG
ACGAGGATATCATCGAAAGCCTCCACGCTGGTCACACACACTATTTTCTCGGCACTTGGT
AAAATAAGGTGCATTTTGGTGTTCTCAACTTCTGTTTGGTTCATTATATTGTAAATGCAT
TCATATCTCTGGGATACAAGGCAGAATATTAGTGCCGGACGTAAGCTAATAAAAGCGAAA
AGAGTCCTAAACTTAGTTGACATGAGCATCCATAAGGAAATTGTTTGATTCAGTTTTGTT
CAATGTCCATCCTGGTGGTTTCCTATTTTGTTTGTGGACTCATATTTTGTTCTTACTTGC
CTTCCCATTCCGGTATACACACCTTTTGAGAGCTTAATATGCGCATTAAAATTAGCACCA
CCTGAAACCTGAAGGTCTGCCCTGTCTAGTTGGTTTTCATCCACATATAAGTTTCTTCTC
ACTCATATCGCTTCTTATATTTTGAAATCTATGATCTGATTCTCCAAGATAGCAATTAAA
CTCAGCAAAAACCAGTTCATACAGTTTCTGATGTTAGTGTGGTAGCTTAGGTGAATGTGT
TAGCTATGTTCAAAATTCATAATAAAGAAGCTTGGGAAGTAACATGGGTAAAATAAATTT
CTTTAGTAGTATTAGATATTGCACGCATAAAATCCATGTCACACAAAACAACATACGACA
TAACCCTAGTGCATCAAGCACAATAATGGAGTAATGTCTATTGTATACATGTGACTTCTT
TAAATAACACTGCACCCAATTTCTTTTAAATTCTGCAGGTTATGAACTGCCCTTCACATT
TTGGGGAACTTACTCCGCATACCCTTTTCTTTGGCATTCTTCTGCCAATTTTCAGGAACC
TTAATATTTCTAGTGATGATGAATGGGGAGCAAAACAAGACGGAACCAATAAGGAGATTA
TATCTGGACTAAATTGCAAAGTGTGGGTGCAATTTGAGAACTACGACGATTTCAACAGTG
CAATGCAGGCATTATGTGGACGTTCATTAGAAAAAGAAGGATCACGGTTGAAGGTAGACT
ATGAAGTAACTTGGGATCATGAAGGTTTCTTCCGCAATGCACAATACGAGCCTGTTCGCA
GCAATTTAGAAGAGAGAAATTCATCGGCTCATGGAAGGAAGAAACATTACACATCGCGAA
TTGAGTCAGATCATAGAAAGAGATTTAGGGATTGATGGATATAGGGCATGGCATGATGGT
GGGATTACTTGGTTCCAAGGACAGGGAAAATGATTGTACTGTATCATTCTGTTGTTTCAT
CATTAGTCTAACAGTAAAGTCTTTCTGAATTAGGTATTGCGTAGTTATTACTATTAGCCT
ATGTCCTGGTTGATTCCCAGAGATCATCACAACACAGTCTTGCTTGTGATTTGTAAAAGA
ATTTGCACTGTTGGCATCTCAATGTATGCTCATTCATTGTTCAATCACAAACTCACAATT
TTGCTGAATGAGAAATTGCAATGGCTAAGATCAGCCTAAGCCTGCAAATTCTAAGCATAA
CTGTTTGTATTGGTTAAAAGTCAGATAATGTGAATTGA
clustalw multiple alignements is not computed in this case