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Oryza sativa
cluster # 4009 cluster # 4009       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4009#0 length = 2954 sequences # 1  
 consensus_4009#1 length = 1088 sequences # 2  
consensusID : consensus_4009#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2954
fasta sequence 
                              [AGCCTGTGTTGACAGCGGAGAAAGCAGTGTAATCCGGTCCCGCCACCGCAGCCGCCTCCACCTCTCTTCCCGGCGCCAATGGCCGCGTCGTGAAGCGCAGCAGCAGCAGCAGCAGCGGAGACAGCGGCAGAAGCTTTGCCTAAGGTTGGGATCCTCCCTATTCGCGCGCGTCTTTGATTTGGCGCGTAAAGTTGTAATCCGTACTCCGGATGGCCGGCTCAATCGCCGCCTCGGCGTTCTTGCCGGGGTCGCCGGCGGCCGCGCCGCCCAAGAGCGTCCTGGGCGAGCGCCCGGACAGCCTGGACGTCCGCGGCATCGCCGCGAAGCCGGGCTCCTCGTCGTCGGCCGCCGCCCTGAGGGCCGGCAAGACGCGCACCCACGCCGCCATCCCCAAGGTGAACGGCGGCAGTTCGGCGCTGGCGGATCCGGAGCACGACACGATGTCCTCCTCCTCCTCCTCCGCGGCGCCGAGGACGTTCTACAACCAGCTCCCCGACTGGAGCATGCTCCTCGCAGCCATCACGACCATCTTCTTGGCCGCGGAGAAGCAGTGGACGCTGCTGGACTGGAAGCCGAAGCGGCCCGACATGCTCACCGACACGTTCGGTTTCGGCAGGATGATACATGAGGGGCTCATGTTCAGGCAGAACTTCTCGATTAGGTCCTATGAGATCGGGGCCGATAGGACGGCGTCTATAGAAACGCTGATGAACCATTTGCAGGAAACCGCACTGAATCATGTGAAGAGCGCTGGGCTGCTAGGAGATGGTTTTGGCTCAACGCCAGAGATGAGTAAACGAGACTTGTTCTGGGTTGTCAGCCAAATGCAGGCAATCGTTGAGCGTTATCCGTGCTGGGGTGATACTGTCGAAGTAGATACATGGGTTGGTGCTCATGGTAAAAATGGAATGCGCAGAGACTGGCATATACGTGATTCTGTAACAGGCCATACAATATTGAAGGCTACAAGTAAATGGGTTATGATGCACAAGCTTACAAGGAGGCTAGCAAGAATTCCTGATGAAGTACGTACTGAGATAGAGCCATACTTTTTTGAGCATGCTTCTATTGTAGATGAAGACAACCAGAAACTTCCAAAACTGCCAGATATTGAAGGTGCTAATGTTGCCAAATATGTCCGGACAGGCCTGACTCCACGATGGGCCGACCTTGATATCAATCAGCATGTTAATAACGTTAAATACATAGGGTGGATCCTAGAGGTAAAAAAAGTTCCCCTATTATGTTCATCTTTATTGCCCTTGCTAACACCTCTTGCCTAGATGATTCTTGAGGGAAAAAAATGCTTCTTGAAGTTCAGTATGTTACTTTCAGAAAAAATATCCATTTGTTTTTATTTACTGTAAACACTCCATGGAGTTGCTGTTAGGCATCTTTGTCGCGGTATTCATTATTAAGTTGTCACATGGTGGAGCATAACTTTGTGTTGCTTTACTTGCCTTTTTCTCTTTGGGCATACATTTAGTACTATTGATGGTGCTACATAATTCAAAGAGATTCATTTATCTCGCTATATTTCCCATATGTTATGTTCCAAGAATTTGGGAATAAACAGTAATCAGAAGAGTACTGGATTTGTAGGTACTTTATTTTTTGTGTGTGTGTGTGGGGGGGGGGGGGCTCAGATCATGCCTATGATTAGGCATTACTGTAGGAGTTTAGATAAACTTGGTCAAGGTCCCAAAAGGGTGTGCCTATGGTTCTACAAGTGTCCACCTAACTTTATCCTCAAGCACGCAACCACTTATCTGGCAGCTTTGTACTCTTTCAAGCTATACGAAAAATATCTGTTGCACTAGTTGGAGAAGTAATGTATCCTAGCAGATTTTACTACATTAGGTTGGTCACCTACGTACCTAACCCTGTACGCTTGTTGCTTCCGATAAAGAGCTTGGCTGGAATACTTATATGCAATTTGATCACAAGTCATTCACTTAATTCAATTTTTTTTAGAGTGATCAACACCTGCATATAATGCATATTTGCCTGGTTGACAATCTGCCGTGTGTATGTGTGTTTTGGAAGAAGGGGAGGGGTAGTCATGTATGTATTTATCCAGTGGACCACATAATGAGGAAAAAGAAATTGTTCAGGTGACCTGCAACCTAGATGGGCCCAAAACAACCCAAAATATTAGGGAAATTAACACTTCAGGCATTTCCTAACATACAGAAATATTTATTACCAACATGCGCACATGTTGCTTAACCCTACCTTTTTGTCCTTTTTTCCCCTCAGAGCGCACCAATCTCCATTCTGGAGAAACATGAGCTGGCAAGTATTGTCCTGGATTACAAGAGGGAGTGTGGCCGAGACAGCGTGCTGCAATCACACACTACCGTGTACACTGACTGCAACAAGCACTCTGGACAAACCACTTTGCACTGTGAGCATTTGCTGAGCCTGGAATCAGGACCTACCATCGTCAAGGCCAGGACCATGTGGAGGCCAAAAGGAACCAGGCCCCAAGAGAGTATCATTCCGTCTTCGTCGTGAAGCGCGTAAAATCTTTCATGTGTTGATTTTGGTAGCAACAACTTGGTTAAACCAAGGACAAGTGGACAACAACTTGTGTTCTCTATGGAAAGGCAAAACCTGGATGAACATAACGACGGGGACGTAAGTTATTTACAGACAAAATGTATGGATTTGGAGGAGTTCAAAAGAGGGGGGGGGGGGGGGGGGGCAAGATGGAGGTAAAATGCAGAAAAGACAGAAGGCGTATTGTGCATGATTTGTTGTTTCAGCTTTTCATTCTATTTTTCCTTTCCTTAGCAAAGATATTCAATTACACAGATGGGTGTTGTAAGTATTGAAATTGTAGCTACTGCTGTACAATGGGAAGTGAAATGCTTCTCATGCATGTTTCTGTCTGGGCTATGTCTATATTATGAGCCCTCGAAAGCAGATTGCCTGGTCCGAATTGTTTGAAA]

[+] EMBL AK120303             [AGCCTGTGTTGACAGCGGAGAAAGCAGTGTAATCCGGTCCCGCCACCGCAGCCGCCTCCACCTCTCTTCCCGGCGCCAATGGCCGCGTCGTGAAGCGCAGCAGCAGCAGCAGCAGCGGAGACAGCGGCAGAAGCTTTGCCTAAGGTTGGGATCCTCCCTATTCGCGCGCGTCTTTGATTTGGCGCGTAAAGTTGTAATCCGTACTCCGGATGGCCGGCTCAATCGCCGCCTCGGCGTTCTTGCCGGGGTCGCCGGCGGCCGCGCCGCCCAAGAGCGTCCTGGGCGAGCGCCCGGACAGCCTGGACGTCCGCGGCATCGCCGCGAAGCCGGGCTCCTCGTCGTCGGCCGCCGCCCTGAGGGCCGGCAAGACGCGCACCCACGCCGCCATCCCCAAGGTGAACGGCGGCAGTTCGGCGCTGGCGGATCCGGAGCACGACACGATGTCCTCCTCCTCCTCCTCCGCGGCGCCGAGGACGTTCTACAACCAGCTCCCCGACTGGAGCATGCTCCTCGCAGCCATCACGACCATCTTCTTGGCCGCGGAGAAGCAGTGGACGCTGCTGGACTGGAAGCCGAAGCGGCCCGACATGCTCACCGACACGTTCGGTTTCGGCAGGATGATACATGAGGGGCTCATGTTCAGGCAGAACTTCTCGATTAGGTCCTATGAGATCGGGGCCGATAGGACGGCGTCTATAGAAACGCTGATGAACCATTTGCAGGAAACCGCACTGAATCATGTGAAGAGCGCTGGGCTGCTAGGAGATGGTTTTGGCTCAACGCCAGAGATGAGTAAACGAGACTTGTTCTGGGTTGTCAGCCAAATGCAGGCAATCGTTGAGCGTTATCCGTGCTGGGGTGATACTGTCGAAGTAGATACATGGGTTGGTGCTCATGGTAAAAATGGAATGCGCAGAGACTGGCATATACGTGATTCTGTAACAGGCCATACAATATTGAAGGCTACAAGTAAATGGGTTATGATGCACAAGCTTACAAGGAGGCTAGCAAGAATTCCTGATGAAGTACGTACTGAGATAGAGCCATACTTTTTTGAGCATGCTTCTATTGTAGATGAAGACAACCAGAAACTTCCAAAACTGCCAGATATTGAAGGTGCTAATGTTGCCAAATATGTCCGGACAGGCCTGACTCCACGATGGGCCGACCTTGATATCAATCAGCATGTTAATAACGTTAAATACATAGGGTGGATCCTAGAGGTAAAAAAAGTTCCCCTATTATGTTCATCTTTATTGCCCTTGCTAACACCTCTTGCCTAGATGATTCTTGAGGGAAAAAAATGCTTCTTGAAGTTCAGTATGTTACTTTCAGAAAAAATATCCATTTGTTTTTATTTACTGTAAACACTCCATGGAGTTGCTGTTAGGCATCTTTGTCGCGGTATTCATTATTAAGTTGTCACATGGTGGAGCATAACTTTGTGTTGCTTTACTTGCCTTTTTCTCTTTGGGCATACATTTAGTACTATTGATGGTGCTACATAATTCAAAGAGATTCATTTATCTCGCTATATTTCCCATATGTTATGTTCCAAGAATTTGGGAATAAACAGTAATCAGAAGAGTACTGGATTTGTAGGTACTTTATTTTTTGTGTGTGTGTGTGGGGGGGGGGGGGCTCAGATCATGCCTATGATTAGGCATTACTGTAGGAGTTTAGATAAACTTGGTCAAGGTCCCAAAAGGGTGTGCCTATGGTTCTACAAGTGTCCACCTAACTTTATCCTCAAGCACGCAACCACTTATCTGGCAGCTTTGTACTCTTTCAAGCTATACGAAAAATATCTGTTGCACTAGTTGGAGAAGTAATGTATCCTAGCAGATTTTACTACATTAGGTTGGTCACCTACGTACCTAACCCTGTACGCTTGTTGCTTCCGATAAAGAGCTTGGCTGGAATACTTATATGCAATTTGATCACAAGTCATTCACTTAATTCAATTTTTTTTAGAGTGATCAACACCTGCATATAATGCATATTTGCCTGGTTGACAATCTGCCGTGTGTATGTGTGTTTTGGAAGAAGGGGAGGGGTAGTCATGTATGTATTTATCCAGTGGACCACATAATGAGGAAAAAGAAATTGTTCAGGTGACCTGCAACCTAGATGGGCCCAAAACAACCCAAAATATTAGGGAAATTAACACTTCAGGCATTTCCTAACATACAGAAATATTTATTACCAACATGCGCACATGTTGCTTAACCCTACCTTTTTGTCCTTTTTTCCCCTCAGAGCGCACCAATCTCCATTCTGGAGAAACATGAGCTGGCAAGTATTGTCCTGGATTACAAGAGGGAGTGTGGCCGAGACAGCGTGCTGCAATCACACACTACCGTGTACACTGACTGCAACAAGCACTCTGGACAAACCACTTTGCACTGTGAGCATTTGCTGAGCCTGGAATCAGGACCTACCATCGTCAAGGCCAGGACCATGTGGAGGCCAAAAGGAACCAGGCCCCAAGAGAGTATCATTCCGTCTTCGTCGTGAAGCGCGTAAAATCTTTCATGTGTTGATTTTGGTAGCAACAACTTGGTTAAACCAAGGACAAGTGGACAACAACTTGTGTTCTCTATGGAAAGGCAAAACCTGGATGAACATAACGACGGGGACGTAAGTTATTTACAGACAAAATGTATGGATTTGGAGGAGTTCAAAAGAGGGGGGGGGGGGGGGGGGGCAAGATGGAGGTAAAATGCAGAAAAGACAGAAGGCGTATTGTGCATGATTTGTTGTTTCAGCTTTTCATTCTATTTTTCCTTTCCTTAGCAAAGATATTCAATTACACAGATGGGTGTTGTAAGTATTGAAATTGTAGCTACTGCTGTACAATGGGAAGTGAAATGCTTCTCATGCATGTTTCTGTCTGGGCTATGTCTATATTATGAGCCCTCGAAAGCAGATTGCCTGGTCCGAATTGTTTGAAA]




>consensus_4009#0
AGCCTGTGTTGACAGCGGAGAAAGCAGTGTAATCCGGTCCCGCCACCGCAGCCGCCTCCA
CCTCTCTTCCCGGCGCCAATGGCCGCGTCGTGAAGCGCAGCAGCAGCAGCAGCAGCGGAG
ACAGCGGCAGAAGCTTTGCCTAAGGTTGGGATCCTCCCTATTCGCGCGCGTCTTTGATTT
GGCGCGTAAAGTTGTAATCCGTACTCCGGATGGCCGGCTCAATCGCCGCCTCGGCGTTCT
TGCCGGGGTCGCCGGCGGCCGCGCCGCCCAAGAGCGTCCTGGGCGAGCGCCCGGACAGCC
TGGACGTCCGCGGCATCGCCGCGAAGCCGGGCTCCTCGTCGTCGGCCGCCGCCCTGAGGG
CCGGCAAGACGCGCACCCACGCCGCCATCCCCAAGGTGAACGGCGGCAGTTCGGCGCTGG
CGGATCCGGAGCACGACACGATGTCCTCCTCCTCCTCCTCCGCGGCGCCGAGGACGTTCT
ACAACCAGCTCCCCGACTGGAGCATGCTCCTCGCAGCCATCACGACCATCTTCTTGGCCG
CGGAGAAGCAGTGGACGCTGCTGGACTGGAAGCCGAAGCGGCCCGACATGCTCACCGACA
CGTTCGGTTTCGGCAGGATGATACATGAGGGGCTCATGTTCAGGCAGAACTTCTCGATTA
GGTCCTATGAGATCGGGGCCGATAGGACGGCGTCTATAGAAACGCTGATGAACCATTTGC
AGGAAACCGCACTGAATCATGTGAAGAGCGCTGGGCTGCTAGGAGATGGTTTTGGCTCAA
CGCCAGAGATGAGTAAACGAGACTTGTTCTGGGTTGTCAGCCAAATGCAGGCAATCGTTG
AGCGTTATCCGTGCTGGGGTGATACTGTCGAAGTAGATACATGGGTTGGTGCTCATGGTA
AAAATGGAATGCGCAGAGACTGGCATATACGTGATTCTGTAACAGGCCATACAATATTGA
AGGCTACAAGTAAATGGGTTATGATGCACAAGCTTACAAGGAGGCTAGCAAGAATTCCTG
ATGAAGTACGTACTGAGATAGAGCCATACTTTTTTGAGCATGCTTCTATTGTAGATGAAG
ACAACCAGAAACTTCCAAAACTGCCAGATATTGAAGGTGCTAATGTTGCCAAATATGTCC
GGACAGGCCTGACTCCACGATGGGCCGACCTTGATATCAATCAGCATGTTAATAACGTTA
AATACATAGGGTGGATCCTAGAGGTAAAAAAAGTTCCCCTATTATGTTCATCTTTATTGC
CCTTGCTAACACCTCTTGCCTAGATGATTCTTGAGGGAAAAAAATGCTTCTTGAAGTTCA
GTATGTTACTTTCAGAAAAAATATCCATTTGTTTTTATTTACTGTAAACACTCCATGGAG
TTGCTGTTAGGCATCTTTGTCGCGGTATTCATTATTAAGTTGTCACATGGTGGAGCATAA
CTTTGTGTTGCTTTACTTGCCTTTTTCTCTTTGGGCATACATTTAGTACTATTGATGGTG
CTACATAATTCAAAGAGATTCATTTATCTCGCTATATTTCCCATATGTTATGTTCCAAGA
ATTTGGGAATAAACAGTAATCAGAAGAGTACTGGATTTGTAGGTACTTTATTTTTTGTGT
GTGTGTGTGGGGGGGGGGGGGCTCAGATCATGCCTATGATTAGGCATTACTGTAGGAGTT
TAGATAAACTTGGTCAAGGTCCCAAAAGGGTGTGCCTATGGTTCTACAAGTGTCCACCTA
ACTTTATCCTCAAGCACGCAACCACTTATCTGGCAGCTTTGTACTCTTTCAAGCTATACG
AAAAATATCTGTTGCACTAGTTGGAGAAGTAATGTATCCTAGCAGATTTTACTACATTAG
GTTGGTCACCTACGTACCTAACCCTGTACGCTTGTTGCTTCCGATAAAGAGCTTGGCTGG
AATACTTATATGCAATTTGATCACAAGTCATTCACTTAATTCAATTTTTTTTAGAGTGAT
CAACACCTGCATATAATGCATATTTGCCTGGTTGACAATCTGCCGTGTGTATGTGTGTTT
TGGAAGAAGGGGAGGGGTAGTCATGTATGTATTTATCCAGTGGACCACATAATGAGGAAA
AAGAAATTGTTCAGGTGACCTGCAACCTAGATGGGCCCAAAACAACCCAAAATATTAGGG
AAATTAACACTTCAGGCATTTCCTAACATACAGAAATATTTATTACCAACATGCGCACAT
GTTGCTTAACCCTACCTTTTTGTCCTTTTTTCCCCTCAGAGCGCACCAATCTCCATTCTG
GAGAAACATGAGCTGGCAAGTATTGTCCTGGATTACAAGAGGGAGTGTGGCCGAGACAGC
GTGCTGCAATCACACACTACCGTGTACACTGACTGCAACAAGCACTCTGGACAAACCACT
TTGCACTGTGAGCATTTGCTGAGCCTGGAATCAGGACCTACCATCGTCAAGGCCAGGACC
ATGTGGAGGCCAAAAGGAACCAGGCCCCAAGAGAGTATCATTCCGTCTTCGTCGTGAAGC
GCGTAAAATCTTTCATGTGTTGATTTTGGTAGCAACAACTTGGTTAAACCAAGGACAAGT
GGACAACAACTTGTGTTCTCTATGGAAAGGCAAAACCTGGATGAACATAACGACGGGGAC
GTAAGTTATTTACAGACAAAATGTATGGATTTGGAGGAGTTCAAAAGAGGGGGGGGGGGG
GGGGGGGCAAGATGGAGGTAAAATGCAGAAAAGACAGAAGGCGTATTGTGCATGATTTGT
TGTTTCAGCTTTTCATTCTATTTTTCCTTTCCTTAGCAAAGATATTCAATTACACAGATG
GGTGTTGTAAGTATTGAAATTGTAGCTACTGCTGTACAATGGGAAGTGAAATGCTTCTCA
TGCATGTTTCTGTCTGGGCTATGTCTATATTATGAGCCCTCGAAAGCAGATTGCCTGGTC
CGAATTGTTTGAAA

consensusID : consensus_4009#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1088
fasta sequence 
                              [ATGAAGTACGTACTGAAATAGAGCCATACTTTTTTGAGCATGCTTCTATTGTAGATGAAGACAACCAGAAACTTCCAAAACTGCCAGATATTGAAGGTGCTAATGTAGCCAAATATGTCCGGACAGGCCTGACTCCACGATGGGCCGACCTTGATATCAATCAGCATGTTAATAACGTTAAATACATAGGGTGGATCCTAGAGAGCGCACCAATCTCCATTCTGGAGAAACATGAGCTGGCAAGTATTGTCCTGGATTACAAGAGGGAGTGTGGCCGAGACAGCGTGCTGCAATCACACACTACCGTGTACACTGACTGCAACAAGCACTCTGGACAAACCACTTTGCACTGTGAGCATTTGCTGAGCCTGGAATCAGGACCTACCATCGTCAAGGCCAGGACCATGTGGAGGCCAAAAGGAACCAGGCCCCAAGAGAGTATCATTCCGTCTTCGTCGTGAAGCGCGTAAAATCTTTCATGTGTTGATTTTGGTAGCAACAACTTGGTTAAACCAAGGACAAGTGGACAACAACTTGTGTTCTCTATGGAAAGGCAAAACCTGGATGAACATAACGACGGGGACGTAAGTTATTTACAGACAAAATGTATGGATTTGGAGGAGTTCAAAAGAGGGGGGGGGGGGGGAATAGGCCGCCCCTCCGCCCACGGCCCGGGGCATTTTTTCGCCCCGACCCCCTCCTTCTCCCGCCACCCCCCACCCGGCGCTGCTCTCCTTGCCGGCCCCTGCTCACCACACCAGCAACCGCCCGCTCCACGGGCGGGGAGGCCCACCCGAAGGGGGGTGTGTGTCACAGAGGGGTGGGAGAGGGGGTGCGTGATGTGCGGTAAGGCGGGATTGCGGGGTCCCTTCGTGCTGCGTCACCCGCGGTCTCCCTCCGCCCGCGGTTGGCTTGCGACGGGGTGCGTCTGTTGTTGTGTGCGGTGCAATCGGGTGGCAACTGCGGGAACCGATGGTGTGTGCTTGCTCGCAGCCCGCCGCCCCCCCCACAGGACCGGCCCGCCTGTGCCCGTCGCCCTGCGCGCGCGGCCTCACTACGAGACAGAGGCCGCCCTAGCGCCGCGCGCG]

[+] EMBL BP184880             [ATGAAGTACGTACTGAAATAGAGCCATACTTTTTTGAGCATGCTTCTATTGTAGATGAAGACAACCAGAAACTTCCAAAACTGCCAGATATTGAAGGTGCTAATGTAGCCAAATATGTCCGGACAGGCCTGACTCCACGATGGGCCGACCTTGATATCAATCAGCATGTTAATAACGTTAAATACATAGGGTGGATCCTAGAGAGCGCACCAATCTCCATTCTGGAGAAACATGAGCTGGCAAGTATTGTCCTGGATTACAAGAGGGAGTGTGGCCGAGACAGCGTGCTGCAATCACACACTACCGTGTACACTGACTGCAACAAGCACTCTGGACAAACCACTTTGCACTGTGAGCATTTGCTGAGCCTGGAATCAGGACCTACCATCGTCAAGGCCAGGACCATGTGGAGGCCAAAAGGAACCAGGCCCCAAGAGAGTATCATTCCGTCTTCGTCGTGAAGCGCGTAAAATCTTTCATGTGTTGATTTTGGTAGCAACAACTTGGTTAAACCAAGGACAAGTGGACAACAACTTGTGTTCTCTATGGAAAGGCAAAACCTGGATGAACATAACGACGGGGACGTAAGTTATTTACAGACAAAATGTATGGATTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA753948             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGTTAAACCAAGGACAAGTGGACAACAACTTGTGTTCTCTATGGAAAGGCAAAACCTGGATGAACATAACGACGGGGACGTAAGTTATTTACAGACAAAATGTATGGATTTGGAGGAGTTCAAAAGAGGGGGGGGGGGGGGAATAGGCCGCCCCTCCGCCCACGGCCCGGGGCATTTTTTCGCCCCGACCCCCTCCTTCTCCCGCCACCCCCCACCCGGCGCTGCTCTCCTTGCCGGCCCCTGCTCACCACACCAGCAACCGCCCGCTCCACGGGCGGGGAGGCCCACCCGAAGGGGGGTGTGTGTCACAGAGGGGTGGGAGAGGGGGTGCGTGATGTGCGGTAAGGCGGGATTGCGGGGTCCCTTCGTGCTGCGTCACCCGCGGTCTCCCTCCGCCCGCGGTTGGCTTGCGACGGGGTGCGTCTGTTGTTGTGTGCGGTGCAATCGGGTGGCAACTGCGGGAACCGATGGTGTGTGCTTGCTCGCAGCCCGCCGCCCCCCCCACAGGACCGGCCCGCCTGTGCCCGTCGCCCTGCGCGCGCGGCCTCACTACGAGACAGAGGCCGCCCTAGCGCCGCGCGCG]




>consensus_4009#1
ATGAAGTACGTACTGAAATAGAGCCATACTTTTTTGAGCATGCTTCTATTGTAGATGAAG
ACAACCAGAAACTTCCAAAACTGCCAGATATTGAAGGTGCTAATGTAGCCAAATATGTCC
GGACAGGCCTGACTCCACGATGGGCCGACCTTGATATCAATCAGCATGTTAATAACGTTA
AATACATAGGGTGGATCCTAGAGAGCGCACCAATCTCCATTCTGGAGAAACATGAGCTGG
CAAGTATTGTCCTGGATTACAAGAGGGAGTGTGGCCGAGACAGCGTGCTGCAATCACACA
CTACCGTGTACACTGACTGCAACAAGCACTCTGGACAAACCACTTTGCACTGTGAGCATT
TGCTGAGCCTGGAATCAGGACCTACCATCGTCAAGGCCAGGACCATGTGGAGGCCAAAAG
GAACCAGGCCCCAAGAGAGTATCATTCCGTCTTCGTCGTGAAGCGCGTAAAATCTTTCAT
GTGTTGATTTTGGTAGCAACAACTTGGTTAAACCAAGGACAAGTGGACAACAACTTGTGT
TCTCTATGGAAAGGCAAAACCTGGATGAACATAACGACGGGGACGTAAGTTATTTACAGA
CAAAATGTATGGATTTGGAGGAGTTCAAAAGAGGGGGGGGGGGGGGAATAGGCCGCCCCT
CCGCCCACGGCCCGGGGCATTTTTTCGCCCCGACCCCCTCCTTCTCCCGCCACCCCCCAC
CCGGCGCTGCTCTCCTTGCCGGCCCCTGCTCACCACACCAGCAACCGCCCGCTCCACGGG
CGGGGAGGCCCACCCGAAGGGGGGTGTGTGTCACAGAGGGGTGGGAGAGGGGGTGCGTGA
TGTGCGGTAAGGCGGGATTGCGGGGTCCCTTCGTGCTGCGTCACCCGCGGTCTCCCTCCG
CCCGCGGTTGGCTTGCGACGGGGTGCGTCTGTTGTTGTGTGCGGTGCAATCGGGTGGCAA
CTGCGGGAACCGATGGTGTGTGCTTGCTCGCAGCCCGCCGCCCCCCCCACAGGACCGGCC
CGCCTGTGCCCGTCGCCCTGCGCGCGCGGCCTCACTACGAGACAGAGGCCGCCCTAGCGC
CGCGCGCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4009#0      AGCCTGTGTTGACAGCGGAGAAAGCAGTGTAATCCGGTCCCGCCACCGCAGCCGCCTCCA 60
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      CCTCTCTTCCCGGCGCCAATGGCCGCGTCGTGAAGCGCAGCAGCAGCAGCAGCAGCGGAG 120
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      ACAGCGGCAGAAGCTTTGCCTAAGGTTGGGATCCTCCCTATTCGCGCGCGTCTTTGATTT 180
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      GGCGCGTAAAGTTGTAATCCGTACTCCGGATGGCCGGCTCAATCGCCGCCTCGGCGTTCT 240
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      TGCCGGGGTCGCCGGCGGCCGCGCCGCCCAAGAGCGTCCTGGGCGAGCGCCCGGACAGCC 300
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      TGGACGTCCGCGGCATCGCCGCGAAGCCGGGCTCCTCGTCGTCGGCCGCCGCCCTGAGGG 360
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      CCGGCAAGACGCGCACCCACGCCGCCATCCCCAAGGTGAACGGCGGCAGTTCGGCGCTGG 420
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      CGGATCCGGAGCACGACACGATGTCCTCCTCCTCCTCCTCCGCGGCGCCGAGGACGTTCT 480
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      ACAACCAGCTCCCCGACTGGAGCATGCTCCTCGCAGCCATCACGACCATCTTCTTGGCCG 540
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      CGGAGAAGCAGTGGACGCTGCTGGACTGGAAGCCGAAGCGGCCCGACATGCTCACCGACA 600
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      CGTTCGGTTTCGGCAGGATGATACATGAGGGGCTCATGTTCAGGCAGAACTTCTCGATTA 660
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      GGTCCTATGAGATCGGGGCCGATAGGACGGCGTCTATAGAAACGCTGATGAACCATTTGC 720
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      AGGAAACCGCACTGAATCATGTGAAGAGCGCTGGGCTGCTAGGAGATGGTTTTGGCTCAA 780
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      CGCCAGAGATGAGTAAACGAGACTTGTTCTGGGTTGTCAGCCAAATGCAGGCAATCGTTG 840
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      AGCGTTATCCGTGCTGGGGTGATACTGTCGAAGTAGATACATGGGTTGGTGCTCATGGTA 900
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      AAAATGGAATGCGCAGAGACTGGCATATACGTGATTCTGTAACAGGCCATACAATATTGA 960
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      AGGCTACAAGTAAATGGGTTATGATGCACAAGCTTACAAGGAGGCTAGCAAGAATTCCTG 1020
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      ATGAAGTACGTACTGAGATAGAGCCATACTTTTTTGAGCATGCTTCTATTGTAGATGAAG 1080
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      ACAACCAGAAACTTCCAAAACTGCCAGATATTGAAGGTGCTAATGTTGCCAAATATGTCC 1140
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      GGACAGGCCTGACTCCACGATGGGCCGACCTTGATATCAATCAGCATGTTAATAACGTTA 1200
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      AATACATAGGGTGGATCCTAGAGGTAAAAAAAGTTCCCCTATTATGTTCATCTTTATTGC 1260
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      CCTTGCTAACACCTCTTGCCTAGATGATTCTTGAGGGAAAAAAATGCTTCTTGAAGTTCA 1320
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      GTATGTTACTTTCAGAAAAAATATCCATTTGTTTTTATTTACTGTAAACACTCCATGGAG 1380
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      TTGCTGTTAGGCATCTTTGTCGCGGTATTCATTATTAAGTTGTCACATGGTGGAGCATAA 1440
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      CTTTGTGTTGCTTTACTTGCCTTTTTCTCTTTGGGCATACATTTAGTACTATTGATGGTG 1500
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      CTACATAATTCAAAGAGATTCATTTATCTCGCTATATTTCCCATATGTTATGTTCCAAGA 1560
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      ATTTGGGAATAAACAGTAATCAGAAGAGTACTGGATTTGTAGGTACTTTATTTTTTGTGT 1620
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      GTGTGTGTGGGGGGGGGGGGGCTCAGATCATGCCTATGATTAGGCATTACTGTAGGAGTT 1680
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      TAGATAAACTTGGTCAAGGTCCCAAAAGGGTGTGCCTATGGTTCTACAAGTGTCCACCTA 1740
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      ACTTTATCCTCAAGCACGCAACCACTTATCTGGCAGCTTTGTACTCTTTCAAGCTATACG 1800
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      AAAAATATCTGTTGCACTAGTTGGAGAAGTAATGTATCCTAGCAGATTTTACTACATTAG 1860
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      GTTGGTCACCTACGTACCTAACCCTGTACGCTTGTTGCTTCCGATAAAGAGCTTGGCTGG 1920
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      AATACTTATATGCAATTTGATCACAAGTCATTCACTTAATTCAATTTTTTTTAGAGTGAT 1980
consensus_4009#1      ------------------------------------------------------------
                                                                                  

consensus_4009#0      CAACACCTGCATATAATGCATATTTGCCTGGTTGACAATCTGCCGTGTGTATGTGTGTTT 2040
consensus_4009#1      ----------------------------------------------ATGAA-GTACGTAC 13
                                                                     ** * **  **  

consensus_4009#0      TGGAAGAAGGGGAGGGGTAGTCATGTATGTATTTATCCAGTGGACCACATAATGAGGAAA 2100
consensus_4009#1      TGAAATA----GAGCCATACTTTTTTGAGCATGCTTCTATTG---TAGATGAAGAC-AAC 65
                      ** ** *    ***   ** *  * *  * **   ** * **    * ** * **  ** 

consensus_4009#0      AAGAAATTGTTCAGGTGACCTGCAACCTAGATGGGCCCAAAACAACCCAAAATATTAGGG 2160
consensus_4009#1      CAGAAACTTCCAAAACTGCCAG--ATATTGAAGGTGCTAATGTAGCCAAATATGTCCGGA 123
                       ***** *    *     ** *  *  * ** **  * **   * ** ** ** *  ** 

consensus_4009#0      AAATTAACACTTCAGGCATTTCCTAACATACAGAAATATTTATTACCAACATGCGCACAT 2220
consensus_4009#1      CAGGCCTGACTCCACG-ATGGGCCGAC-----------CTTGATATCAATCAGC----AT 167
                       *      *** ** * **   *  **            **  ** ***   **    **

consensus_4009#0      GTTGCTTAACCCTACCTTTTTGTCCTTTTTTCCCCTCAGAGCGCACCAATCTCCATTCTG 2280
consensus_4009#1      GTTAAT-AACGTTAAATACATAGGGTGGAT--CCTAGAGAGCGCACCAATCTCCATTCTG 224
                      ***  * ***  **  *   *    *   *  **   ***********************

consensus_4009#0      GAGAAACATGAGCTGGCAAGTATTGTCCTGGATTACAAGAGGGAGTGTGGCCGAGACAGC 2340
consensus_4009#1      GAGAAACATGAGCTGGCAAGTATTGTCCTGGATTACAAGAGGGAGTGTGGCCGAGACAGC 284
                      ************************************************************

consensus_4009#0      GTGCTGCAATCACACACTACCGTGTACACTGACTGCAACAAGCACTCTGGACAAACCACT 2400
consensus_4009#1      GTGCTGCAATCACACACTACCGTGTACACTGACTGCAACAAGCACTCTGGACAAACCACT 344
                      ************************************************************

consensus_4009#0      TTGCACTGTGAGCATTTGCTGAGCCTGGAATCAGGACCTACCATCGTCAAGGCCAGGACC 2460
consensus_4009#1      TTGCACTGTGAGCATTTGCTGAGCCTGGAATCAGGACCTACCATCGTCAAGGCCAGGACC 404
                      ************************************************************

consensus_4009#0      ATGTGGAGGCCAAAAGGAACCAGGCCCCAAGAGAGTATCATTCCGTCTTCGTCGTGAAGC 2520
consensus_4009#1      ATGTGGAGGCCAAAAGGAACCAGGCCCCAAGAGAGTATCATTCCGTCTTCGTCGTGAAGC 464
                      ************************************************************

consensus_4009#0      GCGTAAAATCTTTCATGTGTTGATTTTGGTAGCAACAACTTGGTTAAACCAAGGACAAGT 2580
consensus_4009#1      GCGTAAAATCTTTCATGTGTTGATTTTGGTAGCAACAACTTGGTTAAACCAAGGACAAGT 524
                      ************************************************************

consensus_4009#0      GGACAACAACTTGTGTTCTCTATGGAAAGGCAAAACCTGGATGAACATAACGACGGGGAC 2640
consensus_4009#1      GGACAACAACTTGTGTTCTCTATGGAAAGGCAAAACCTGGATGAACATAACGACGGGGAC 584
                      ************************************************************

consensus_4009#0      GTAAGTTATTTACAGACAAAATGTATGGATTTGGAGGAGTTCAAAAGAGGGGGGGGGGGG 2700
consensus_4009#1      GTAAGTTATTTACAGACAAAATGTATGGATTTGGAGGAGTTCAAAAGAGGGGGGGGGGGG 644
                      ************************************************************

consensus_4009#0      GGGGGGG--------------CAAGATG-GAGGTAAAATGCAGAAAAGACAGAAGGCGTA 2745
consensus_4009#1      GGAATAGGCCGCCCCTCCGCCCACGGCCCGGGGCATTTTTTCGCCCCGACCCCCTCCTTC 704
                      **    *              ** *    * ** *   *   *    ***      * * 

consensus_4009#0      TTGTGC-ATGATTTGTT-GTTTCAGCTTTTCATTCTA-TTTTTCCTTTCCTTAGCAAAGA 2802
consensus_4009#1      TCCCGCCACCCCCCACCCGGCGCTGCTCTCCTTGCCGGCCCCTGCTCACCACACCAGCAA 764
                      *   ** *          *   * *** * * * *       * **  **  * **   *

consensus_4009#0      TATTCAATTACACAGATGGGTGTTGTAAGTATTGAAATTGTAGCTACTGCTGTACAATGG 2862
consensus_4009#1      CCGCCCGCTCCACGGGCGGGGAGGCCCACCCGAAGGGGGGTGTGTGTCACAGAGGGGTGG 824
                          *   * *** *  ***       *           **   *    * *     ***

consensus_4009#0      GAAGTGAAATGCTTCTCATGCAT--GTTTCTGTCTGGGCTATGTCTATATTATGAGCCCT 2920
consensus_4009#1      GAGAGGGGGTGCGTGATGTGCGGTAAGGCGGGATTGCGGGGTCCCTTCGTGCTGCGTCAC 884
                      **   *   *** *    ***          *  ** *   *  **   *  ** * *  

consensus_4009#0      CGAAAGCAGATTGCCTGGTCCGAATTGTTTGAAA-------------------------- 2954
consensus_4009#1      CCGCGGTCTCCCTCCGCCCGCGGTTGGCTTGCGACGGGGTGCGTCTGTTGTTGTGTGCGG 944
                      *    *       **     **  * * ***  *                          

consensus_4009#0      ------------------------------------------------------------
consensus_4009#1      TGCAATCGGGTGGCAACTGCGGGAACCGATGGTGTGTGCTTGCTCGCAGCCCGCCGCCCC 1004
                                                                                  

consensus_4009#0      ------------------------------------------------------------
consensus_4009#1      CCCCACAGGACCGGCCCGCCTGTGCCCGTCGCCCTGCGCGCGCGGCCTCACTACGAGACA 1064
                                                                                  

consensus_4009#0      ------------------------
consensus_4009#1      GAGGCCGCCCTAGCGCCGCGCGCG 1088


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)