cluster # 4028

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Oryza sativa
cluster # 4028 cluster # 4028 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4028#0 length = 719 sequences # 3

consensusID : consensus_4028#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 719
fasta sequence

                              [TTGCATACCATAGAACATTCCTAGATAGAGAACCACCGTGAGGAACATGGCCGGGCTGCAGAGATCTTCGCAGACATTTAGAAGGTCTGGTTCATCTGGCTTGGTCTGGGATGAGAGGCTTATGTTAGATGGTCATAGCGAGAGAGATCAAGAAGATGGAGCCTTAGAGCTTAGACACTCCCGTAAGTGTTGGGTCGATTAGGCTGCAGCTTAGGCATGGCAATGGTGCAGGGCACACCAGGTGCAACAACAGCCAGGCGTTCCATACTCGCCGTATGCCCCCAGCACAGGATCCTCCTTCACCCAAGGTTCCTGGATGCATCTTCTGTGGAATTTTTAGGAAGCCGGTGCTTTCAGAGCCATCTAAACCAAGAAGGTTCTAGCCTTTTGTGCTCTTCTCAACTATCTGTGCAGAGATATCAGTTTCTTTTTTCTTTGTGGCTTTGTAGTCAGGTCCATCATGTATAGATGTAAGTAGTAAGTCATATAGTTGCATTTGTTGTGAGCTTTCTTCTTTTTATGCTACTGTTCTG--TTTTTTTTGTTTACTGGTTTCCCTCTTGTTAGCTCAACACTAGTTAGCAGCTGTATTCTAGAATACCC-CCTCTGCCATCATGTACATAATAGAGTATGTGCATATCGTTGTATCATATGTATAAGCCCTTTGTACATATAAATACATAATATGA-GTATGATGTTTTCTATCCAAAAAAAAAAAAAA]

[+] EMBL AK120465             [TTGCATACCATAGAACATTCCTAGATAGAGAACCACCGTGAGGAACATGGCCGCGCTACAAAGATCTTCGCAGACATTTAGAAGGTCCGGTTCATCTGGCTTGGTCTGGGATGAGAGGCTTATGTTAGATGGTCATAGCGAGAGAGATCAAGAAGATGGAGCCTTAGAGCTGAGACACTCCCGT AGTGTTGGGTTGATTGGGCTGCAGCGTAGGCATGGCGATGGTGCAGGGCACACCAGGTGCAACAACAGCCAGGCGTTCCATACTCGCCGTGTGCCCCCAGCACAGGATCCTCCTTCACCCAAGGTTCCCGGATGCATCTTCTGTGGAATTTTTAGGAAGCCGGTACTTTCAGAGCCATCTAAACCAAGAAGGTTCTAGCCTTTTGTGCTCTTCTCAACTATCTGTGCAGAGCTATCAGTTTCTTTTTTCTTTGTGGCTTTGTAGTCAGGTCCATCATGTATAGATGTAAGTAGTAAGTCATATAGTTGCAGTTGCTGTCAGCTTTCTTCTTTTTATGCTACTGTTCTG  TTTTTTTT TTTACTGGTTTCCCTCTTGTTAGCTCAACACTAGTTAGCAGCTGTATTCTAGAATGCCCGCCTCTGCCATCATGTACTTGATAGAGTATGTGCATATCGTTGTATCATATGTATAAGCCCTTTGTACATATAAATACATAATATGATGTAT                            ]
[-] EMBL CA763634             [                                               TGGCTGGGCTGCAGAGATCTTCGCAGACATTTAGAAGGTCTGGTTCATCTGGCTTGGTCTGGGATGAGAGGCTTATGTTAGATGGTCATAGCGAGAGAGATCAAGAAGATGGAGCCTTAGAGCTTAGACACTCCCGTAAGTGTTGGGTCGATTAGGCTGCAGCTTAGGCATGGCAATGGTGCAGGGCACACCAGGTGCAACAACAGCCAGGCGTTCCATACTCGCCGTATGCCCCCAGCACAGGATCCTCCTTCACCCAAGGTTCCTGGATGCATCTTCTGTGGAATTTTTAGGAAGCCGGTGCTTTCAGAGCCATCTAAACCAAGAAGGTTCTAGCCTTTTGTGCTCTTCTCAACTATCTGTGCAGAGATATCAGTTTCTTTTTTCTTTGTGGCTTTGTAGTCAGGTCCATCATGTATAGATGTAAGTAGTAAGTCATATAGTTGCATTTGTTGTGAGCTTTCTTC TTTTATGCTACTGTTCTT  TTTTTTTTGTTTACTGGTTTCCCTCTTGTTAGCTCAACACTAGTTAGCAGCTGTATTCTAGAATACCC CCTCTGCCATCATGTACATAATAGAGTATGTGCATATCGTTGTATCATATGTATAAGCCCTTTGTACATATAAATACATAATATGA GTATGATGTTTTCTATCCAAAAAAAAAAAAAA]
[-] EMBL CA763633             [                                                    GGGCTGCAGAGATCTTCGCAGACATTTAGAAGGTCTGGTTCATCTGGCTTGGTCTGGGATGAGAGGCTTATGTTAGATGGTCATAGCGAGAGAGATCAAGAAGATGGAGCCTTAGAGCTTAGACACTCCCGTAAGTGTTGGGTCGATTAGGCTGCAGCTTAGGCATGGCAATGGTGCAGGGCACACCAGGTGCAACAACAGCCAGGCGTTCCATACTCGCCGTATGCCCCCAGCACAGGATCCTCCTTCACCCAAGGTTCCTGGATGCATTTTCTGTGGAATTTTTAGGAAGCCGGTGCTTTTAGAGCCATTTAAACCAAGAAGGTTCTAGCCTTTTGTGCTCTTCTCAACTATCTGTGCAGAGATATCAGTTTCTTTTTTCTTTGTGGCTTTGTAGTCAGGTCCATCATGTATAGATGTAAGTAGTAAGTCATATAGTTGCATTTGTTGTGAGCTTTCTTCTTTTTATGCTACTGTTCTGTTTTTTTTTTGTTTACTGGTTTCCCTCTTGTTAGCTCAACACTAGTTAGCAGCTGTATTCTAGAATACCC CCTCTGCCATCATGTACATAATAGAGTATGTGCATATCGTTGTATCATATGTATAAGCCCTTTGTACATATAAATACATAATATGA GTATGATGTTTTCTA   AAAAAAAAAAAAAA]




>consensus_4028#0
TTGCATACCATAGAACATTCCTAGATAGAGAACCACCGTGAGGAACATGGCCGGGCTGCA
GAGATCTTCGCAGACATTTAGAAGGTCTGGTTCATCTGGCTTGGTCTGGGATGAGAGGCT
TATGTTAGATGGTCATAGCGAGAGAGATCAAGAAGATGGAGCCTTAGAGCTTAGACACTC
CCGTAAGTGTTGGGTCGATTAGGCTGCAGCTTAGGCATGGCAATGGTGCAGGGCACACCA
GGTGCAACAACAGCCAGGCGTTCCATACTCGCCGTATGCCCCCAGCACAGGATCCTCCTT
CACCCAAGGTTCCTGGATGCATCTTCTGTGGAATTTTTAGGAAGCCGGTGCTTTCAGAGC
CATCTAAACCAAGAAGGTTCTAGCCTTTTGTGCTCTTCTCAACTATCTGTGCAGAGATAT
CAGTTTCTTTTTTCTTTGTGGCTTTGTAGTCAGGTCCATCATGTATAGATGTAAGTAGTA
AGTCATATAGTTGCATTTGTTGTGAGCTTTCTTCTTTTTATGCTACTGTTCTGTTTTTTT
TGTTTACTGGTTTCCCTCTTGTTAGCTCAACACTAGTTAGCAGCTGTATTCTAGAATACC
CCCTCTGCCATCATGTACATAATAGAGTATGTGCATATCGTTGTATCATATGTATAAGCC
CTTTGTACATATAAATACATAATATGAGTATGATGTTTTCTATCCAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case