cluster # 4029

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Oryza sativa
cluster # 4029 cluster # 4029 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4029#0 length = 1999 sequences # 3
consensusID : consensus_4029#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1999
fasta sequence
                              [GCCTTCCCCGGCTTTGACTCACAGACTCCACGTCTCCACCCCGAATCTCACTTCCCGTCTCGCCCCCGCCCCCAATCCTCACCGCCGCCGCCCGGGCCAGCCATGGTGGGCGCCGACGCCGAGTCCTCGGCGGTGGTCGACGCCGGCGAGGGCCACGGAGACCTGGCCCTCGATTCCTCCTCCGCTGCCTCCACCGACCCTCTGCTCCACCCGCCGCCGTCCCCTTCCTCCACCCCCTCCTCTCCCACCGCGATCGCCGACCACGACGCGTTCATCGAGGAAGACGGCGAGGATGACTCCGCGCCCCACGTCCCATCCGCTTCCGACGAGGCGGCCCCGGAGTTCGTCCAGATCACCGTCTCCGAGCCTAAGAAGCACGCGGAGCCGGCCGCGGGGGCAGCGGGGGTCATTCCTGGCTCCGGGAGCTACTTCTCCTACCTCATCACCACCAGGGCGGCCGACGGCGGCCTGTTCCGCGTGAGGCGGCGCTTCCGCGACGTCGTCGCCCTCGCGGACCGCCTCGCGGCGGCCTACCGGGGGCTCTTCGTCCCGGCGCGACCAGACAAGAGCATCGTCGAGGGGCAGGTCATGCAGCGGCATGAGTTCGTGAACCAGCGCTGCGCCGCGCTCCAGCGCTACCTCGGCCGCCTTGCCGCGCACCCCACCATCGGCCGCAGCGCCGAACTCCATGACTTCCTGACTGAGCCAAGCGGCATTCCCACCTCCGCGGGCGAGTCACCCAGATCGGATCCCGCGTTGAGTGCTGCCATGTCCGCGGTCGCCGTTACCGCTCCAACGGCGCCTGCAAAGCCTGGGAGAGATATTTTTGGGATGTTTAAGGACCTGAAGCAGACGGTGGCGAATGGATTGGTGGCAGTGAGGCCGCCTCCAGTGGAGGAGGAAACTGATGCAAAGTTCGTCATGCACAAGGCCAAGCTGGAGTACTTCGAGCAGCATCTCACGACGGCATCTCAGCAGGTAGAGGCTCTTCTTAAAGCTTATGATGATCTTAAAGCAACTACAGGTCAACTGGGAATGACATTCATTAAGCTGGCAAAGTTTGAAAAGGAGCAGGATACATGTAATTCTCAGAGAAAAAGAGCTGTTGATATGAGCAATTTCGCAAATGCTGTTATCAACATGAGCAGATCACAGACAAAACTAAATGCTAAAATTGAAATACATCTGGGCACTATCTATGAATACTTGGAGACAATGACTTCTGTTCGTAATGCATTTACTGATCGCGCAAATGCTTTGCTTCGTGTGCAAAGTCTGTCAGGAGATTTATTTCTCTTGCATACTCAGGCAGCAAAACTTGAGTCCGTATCATCCAGAGGAATGGGCCAGGAAAGATTAAGATACCAAAAGATTGAAGAACTGAAAGAAACAATAAGAAAAACAGAAGATGCAAAAGGCAATGCACGCCAGGAATATGAGCTTATCAAGGAAAACAACATGAATGAGATCATAAGGTTTAACAAAGAAAAACGCCATGGTTTGGTTGAGATGCTGAAAGGCTTTGTAAGAAATCAGGTTTCATACTCAGAGCATATTTCTAGTATATGGACAAAGGTAGCAGAAGAAACCACAGGATATACAGGCAAGGGCAGCTGAAGTAGGATGTAAATATGCATGTGAATTTTAGCCTTTTATCTGCAGATCAACATCAGTTACAGAATTCGAAATCGTCTTATAGCTCAACACAGTGGTATAGAGTATAGACTATAAACAGAGATGTCACACTTCCCTCCATCCAAAGGGCGTCGGATCTGTGATTTTTCTGGAGATGGTATCTCCGGCTGTTTAGGCGTATAGCAGAATTTTCTAGGAAAGAGAATCAAATGATCAGCAAACCAACACAACTGTTTTTTTTTCCCAGTCCTTTTTTTTTCCACCCTGGGCTTTACAGTAATGTAATGTTGAGTTTCTGTACACGAAACTAGATTAGCTGGAATTTTCTGGTTCCTGAGAGAACCACATACATGAAGATTTCTTT]

[+] EMBL AK120476             [GCCTTCCCCGGCTTTGACTCACAGACTCCACGTCTCCACCCCGAATCTCACTTCCCGTCTCGCCCCCGCCCCCAATCCTCACCGCCGCCGCCCGGGCCAGCCATGGTGGGCGCCGACGCCGAGTCCTCGGCGGTGGTCGACGCCGGCGAGGGCCACGGAGACCTGGCCCTCGATTCCTCCTCCGCTGCCTCCACCGACCCTCTGCTCCACCCGCCGCCGTCCCCTTCCTCCACCCCCTCCTCTCCCACCGCGATCGCCGACCACGACGCGTTCATCGAGGAAGACGGCGAGGATGACTCCGCGCCCCACGTCCCATCCGCTTCCGACGAGGCGGCCCCGGAGTTCGTCCAGATCACCGTCTCCGAGCCTAAGAAGCACGCGGAGCCGGCCGCGGGGGCAGCGGGGGTCATTCCTGGCTCCGGGAGCTACTTCTCCTACCTCATCACCACCAGGGCGGCCGACGGCGGCCTGTTCCGCGTGAGGCGGCGCTTCCGCGACGTCGTCGCCCTCGCGGACCGCCTCGCGGCGGCCTACCGGGGGCTCTTCGTCCCGGCGCGACCAGACAAGAGCATCGTCGAGGGGCAGGTCATGCAGCGGCATGAGTTCGTGAACCAGCGCTGCGCCGCGCTCCAGCGCTACCTCGGCCGCCTTGCCGCGCACCCCACCATCGGCCGCAGCGCCGAACTCCATGACTTCCTGACTGAGCCAAGCGGCATTCCCACCTCCGCGGGCGAGTCACCCAGATCGGATCCCGCGTTGAGTGCTGCCATGTCCGCGGTCGCCGTTACCGCTCCAACGGCGCCTGCAAAGCCTGGGAGAGATATTTTTGGGATGTTTAAGGACCTGAAGCAGACGGTGGCGAATGGATTGGTGGCAGTGAGGCCGCCTCCAGTGGAGGAGGAAACTGATGCAAAGTTCGTCATGCACAAGGCCAAGCTGGAGTACTTCGAGCAGCATCTCACGACGGCATCTCAGCAGGTAGAGGCTCTTCTTAAAGCTTATGATGATCTTAAAGCAACTACAGGTCAACTGGGAATGACATTCATTAAGCTGGCAAAGTTTGAAAAGGAGCAGGATACATGTAATTCTCAGAGAAAAAGAGCTGTTGATATGAGCAATTTCGCAAATGCTGTTATCAACATGAGCAGATCACAGACAAAACTAAATGCTAAAATTGAAATACATCTGGGCACTATCTATGAATACTTGGAGACAATGACTTCTGTTCGTAATGCATTTACTGATCGCGCAAATGCTTTGCTTCGTGTGCAAAGTCTGTCAGGAGATTTATTTCTCTTGCATACTCAGGCAGCAAAACTTGAGTCCGTATCATCCAGAGGAATGGGCCAGGAAAGATTAAGATACCAAAAGATTGAAGAACTGAAAGAAACAATAAGAAAAACAGAAGATGCAAAAGGCAATGCACGCCAGGAATATGAGCTTATCAAGGAAAACAACATGAATGAGATCATAAGGTTTAACAAAGAAAAACGCCATGGTTTGGTTGAGATGCTGAAAGGCTTTGTAAGAAATCAGGTTTCATACTCAGAGCATATTTCTAGTATATGGACAAAGGTAGCAGAAGAAACCACAGGATATACAGGCAAGGGCAGCTGAAGTAGGATGTAAATATGCATGTGAATTTTAGCCTTTTATCTGCAGATCAACATCAGTTACAGAATTCGAAATCGTCTTATAGCTCAACACAGTGGTATAGAGTATAGACTATAAACAGAGATGTCACACTTCCCTCCATCCAAAGGGCGTCGGATCTGTGATTTTTCTGGAGATGGTATCTCCGGCTGTTTAGGCGTATAGCAGAATTTTCTAGGAAAGAGAATCAAATGATCAGCAAACCAACACAACTGTTTTTTTTTCCCAGTCCTTTTTTTTTCCACCCTGGGCTTTACAGTAATGTAATGTTGAGTTTCTGTACACGAAACTAGATTAGCTGGAATTTTCTGGTTCCTGAGAGAACCACATACATGAAGATTTCTTT]
[+] EMBL AK073922             [    TCCCCGGCTTTGACTCACAGACTCCACGTCTCCACCCCGAATCTCACTTCCCGTCTCGCCCCCGCCCCCAATCCTCACCGCCGCCGCCCGGGCCAGCCATGGTGGGCGCCGACGCCGAGTCCTCGGCGGTGGTCGACGCCGGCGAGGGCCACGGAGACCTGGCCCTCGATTCCTCCTCCGCTGCCTCCACCGACCCTCTGCTCCACCCGCCGCCGTCCCCTTCCTCCACCCCCTCCTCTCCCACCGCGATCGCCGACCACGACGCGTTCATCGAGGAAGACGGCGAGGATGACTCCGCGCCCCACGTCCCATCCGCTTCCGACGAGGCGGCCCCGGAGTTCGTCCAGATCACCGTCTCCGAGCCTAAGAAGCACGCGGAGCCGGCCGCGGGGGCAGCGGGGGTCATTCCTGGCTCCGGGAGCTACTTCTCCTACCTCATCACCACCAGGGCGGCCGACGGCGGCCTGTTCCGCGTGAGGCGGCGCTTCCGCGACGTCGTCGCCCTCGCGGACCGCCTCGCGGCGGCCTACCGGGGGCTCTTCGTCCCGGCGCGACCAGACAAGAGCATCGTCGAGGGGCAGGTCATGCAGCGGCATGAGTTCGTGAACCAGCGCTGCGCCGCGCTCCAGCGCTACCTCGGCCGCCTTGCCGCGCACCCCACCATCGGCCGCAGCGCCGAACTCCATGACTTCCTGACTGAGCCAAGCGGCATTCCCACCTCCGCGGGCGAGTCACCCAGATCGGATCCCGCGTTGAGTGCTGCCATGTCCGCGGCCGCCGTTACCGCTCCAACGGCGCCTGCAAAGCCTGGGAGAGATATTTTTGGGATGTTTAAGGACCTGAAGCAGACGGTGGCGAATGGATTGGTGGCAGTGAGGCCGCCTCCAGTGGAGGAGGAAACTGATGCAAAGTTCGTCATGCACAAGGCCAAGCTGGAGTACTTCGAGCAGCATCTCACGACGGCATCTCAGCAGGTAGAGGCTCTTCTTAAAGCTTATGATGATCTTAAAGCAACTACAGGTCAACTGGGAATGACATTCATTAAGCTGGCAAAGTTTGAAAAGGAGCAGGATACATGTAATTCTCAGAGAAAAAGAGCTGTTGATATGAGCAATTTCGCAAATGCTGTTATCAACATGAGCAGATCACAGACAAAACTAAATGCTAAAATTGAAATACATCTGGGCACTATCTATGAATACTTGGAGACAATGACTTCTGTTCGTAATGCATTTACTGATCGCGCAAATGCTTTGCTTCGTGTGCAAAGTCTGTCAGGAGATTTATTTCTCTTGCATACTCAGGCAGCAAAACTTGAGTCCGTATCATCCAGAGGAATGGGCCAGGAAAGATTAAGATACCAAAAGATTGAAGAACTGAAAGAAACAATAAGAAAAACAGAAGATGCAAAAGGCAATGCACGCCAGGAATATGAGCTTATCAAGGAAAACAACATGAATGAGATCATAAGGTTTAACAAAGAAAAACGCCATGGTTTGGTTGAGATGCTGAAAGGCTTTGTAAGAAATCAGGTTTCATACTCAGAGCATATTTCTAGTATATGGACAAAGGTAGCAGAAGAAACCACAGGATATACAGGCAAGGGCAGCTGAAGTAGGATGTAAATATGCATGTGAATTTTAGCCTTTTATCTGCAGATCAACATCAGTTACAGAATTCGAAATCGTCTTATAGCTCAACACAGTGGTATAGAGTATAGACTATAAACAGAGATGTCACACTTCCCTCCATCCAAAGGGCGTCGGATCTGTGATTTTTCTGGAGATGGTATCTCCGGCTGTTTAGGCGTATAGCAGAATTTTCTAGGAAAGAGAATCAAATGATCAGCAAACCAACACAACTGTTTTTTTTTCCCAGTCC TTTTTTTTCCACCCTGGGCTTTACAGTAATGTAATGTTGAGTTTCTGTACACGAAACTAGATTAGCTGGAATTTTCTGGTTCCTGAGAGAACCACATACATGAAGATTTCT  ]
[-] EMBL BI306731             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TATAGCTCAACACAGTGGTATAGAGTATAGACTATAAACAGAGATGTCACACTTCCCTCCATCCAAAGGGCGTCGGATCTGTGATTTTTCTGGAGATGGTATCTCCGGCTGTTTAGGCGTATAGCAGAATTTTCCAGGAAAGAGAATCAAATGATCAGCAAACCAACACAACTG TTTTTTTTCCCAGTCCTTTTTTTTTCCACCCTGGGCTTTACAGTAATGTAATGTTGAGTTTCTGTACACGAAACTAGATTAGCTGGAATTTTCTGGTTCCTGAGAGAACCACA                 ]




>consensus_4029#0
GCCTTCCCCGGCTTTGACTCACAGACTCCACGTCTCCACCCCGAATCTCACTTCCCGTCT
CGCCCCCGCCCCCAATCCTCACCGCCGCCGCCCGGGCCAGCCATGGTGGGCGCCGACGCC
GAGTCCTCGGCGGTGGTCGACGCCGGCGAGGGCCACGGAGACCTGGCCCTCGATTCCTCC
TCCGCTGCCTCCACCGACCCTCTGCTCCACCCGCCGCCGTCCCCTTCCTCCACCCCCTCC
TCTCCCACCGCGATCGCCGACCACGACGCGTTCATCGAGGAAGACGGCGAGGATGACTCC
GCGCCCCACGTCCCATCCGCTTCCGACGAGGCGGCCCCGGAGTTCGTCCAGATCACCGTC
TCCGAGCCTAAGAAGCACGCGGAGCCGGCCGCGGGGGCAGCGGGGGTCATTCCTGGCTCC
GGGAGCTACTTCTCCTACCTCATCACCACCAGGGCGGCCGACGGCGGCCTGTTCCGCGTG
AGGCGGCGCTTCCGCGACGTCGTCGCCCTCGCGGACCGCCTCGCGGCGGCCTACCGGGGG
CTCTTCGTCCCGGCGCGACCAGACAAGAGCATCGTCGAGGGGCAGGTCATGCAGCGGCAT
GAGTTCGTGAACCAGCGCTGCGCCGCGCTCCAGCGCTACCTCGGCCGCCTTGCCGCGCAC
CCCACCATCGGCCGCAGCGCCGAACTCCATGACTTCCTGACTGAGCCAAGCGGCATTCCC
ACCTCCGCGGGCGAGTCACCCAGATCGGATCCCGCGTTGAGTGCTGCCATGTCCGCGGTC
GCCGTTACCGCTCCAACGGCGCCTGCAAAGCCTGGGAGAGATATTTTTGGGATGTTTAAG
GACCTGAAGCAGACGGTGGCGAATGGATTGGTGGCAGTGAGGCCGCCTCCAGTGGAGGAG
GAAACTGATGCAAAGTTCGTCATGCACAAGGCCAAGCTGGAGTACTTCGAGCAGCATCTC
ACGACGGCATCTCAGCAGGTAGAGGCTCTTCTTAAAGCTTATGATGATCTTAAAGCAACT
ACAGGTCAACTGGGAATGACATTCATTAAGCTGGCAAAGTTTGAAAAGGAGCAGGATACA
TGTAATTCTCAGAGAAAAAGAGCTGTTGATATGAGCAATTTCGCAAATGCTGTTATCAAC
ATGAGCAGATCACAGACAAAACTAAATGCTAAAATTGAAATACATCTGGGCACTATCTAT
GAATACTTGGAGACAATGACTTCTGTTCGTAATGCATTTACTGATCGCGCAAATGCTTTG
CTTCGTGTGCAAAGTCTGTCAGGAGATTTATTTCTCTTGCATACTCAGGCAGCAAAACTT
GAGTCCGTATCATCCAGAGGAATGGGCCAGGAAAGATTAAGATACCAAAAGATTGAAGAA
CTGAAAGAAACAATAAGAAAAACAGAAGATGCAAAAGGCAATGCACGCCAGGAATATGAG
CTTATCAAGGAAAACAACATGAATGAGATCATAAGGTTTAACAAAGAAAAACGCCATGGT
TTGGTTGAGATGCTGAAAGGCTTTGTAAGAAATCAGGTTTCATACTCAGAGCATATTTCT
AGTATATGGACAAAGGTAGCAGAAGAAACCACAGGATATACAGGCAAGGGCAGCTGAAGT
AGGATGTAAATATGCATGTGAATTTTAGCCTTTTATCTGCAGATCAACATCAGTTACAGA
ATTCGAAATCGTCTTATAGCTCAACACAGTGGTATAGAGTATAGACTATAAACAGAGATG
TCACACTTCCCTCCATCCAAAGGGCGTCGGATCTGTGATTTTTCTGGAGATGGTATCTCC
GGCTGTTTAGGCGTATAGCAGAATTTTCTAGGAAAGAGAATCAAATGATCAGCAAACCAA
CACAACTGTTTTTTTTTCCCAGTCCTTTTTTTTTCCACCCTGGGCTTTACAGTAATGTAA
TGTTGAGTTTCTGTACACGAAACTAGATTAGCTGGAATTTTCTGGTTCCTGAGAGAACCA
CATACATGAAGATTTCTTT
clustalw multiple alignements is not computed in this case