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Oryza sativa
cluster # 4038 cluster # 4038       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4038#0 length = 1738 sequences # 3  

consensusID : consensus_4038#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1738
fasta sequence
                              [CCCTTTTCCTCCGCATTTCGCCTCGGGATTGCTCGACGGCGAGCGATTCCGACTTCACGCGCTCCCATGGCAGGCGGCGGCGGCGGCGGCAGAGCTTCCGCGCAGCGGCGGGCGGCGCTCGCGGCGCTGATCACGCTCCTCTTGCTTGCGTCCCTCGCTTTCCTCCTGTCGGCGACGGGCACCGCCTCCGCCCCGAACTCCGCACCCTTCCGGCTGGCCGCCATTCGCCGCCACGCCGAGGACCACGCCGCCGTTCTCGCCGCCTACGCGGCCCAGGCGCGGAAACTCAGCGCGGCCTCCGCCTCCCAGACGGAGTCTTTCTTGTCTATCTCCGGGCATCTCAGCTCGCTCTCGTCCCGCATCTCCCTGTCCACCGTCGCGCTCTTGGAGAAGGAGACGCGCGGGCAAATCAAGCGCGCCCGCTCCCTGGCAGGCGCCGCCAAGGAGGCGTTCGACACGCAGTCCAAGATCCAGAAGCTCTCCGACACCGTCTTCGCCGTCGACCAGCAGCTCCTCCGCGCCCGCCGCGCGGGCCTCCTCAACTCCCGCATCGCCGCCGGCTCCACGCCCAAGTCGCTCCACTGCCTCGTCATGCGCCTCCTCGAGGCACGCCTCGCCAACGCCTCCGCCATCCCCGACGACCCGCCCGTCCCGCCCCCTCAGTTCACCGACCCGGCGCTGTACCACTACGCCATCTTCTCCGACAACGTGCTCGCCGTGTCCGTCGTGGTGGCCTCCGCGGCGCGCGCAGCCGCCGAGCCGGCGCGCCACGTCTTCCACGTGGTCACCGCGCCCATGTACCTCCCGGCCTTCCGCGTCTGGTTCGCGCGCCGGCCGCCGCCGCTCGGCACGCACGTGCAGCTCCTCGCCGTCTCGGACTTCCCGTTCCTGAACGCCTCCGCCTCCCCGGTCATCAGGCAGATCGAGGACGGCAACAGGGACGTGCCGCTGCTCGACTACCTCCGGTTCTACCTCCCGGAGATGTTCCCGGCGCTGCGGCGGGTGGTGCTCCTGGAGGACGACGTGGTGGTGCAGAGGGACCTGGCCGGGCTGTGGCGCGTCGACCTCGGCGGCAAGGTGAACGCCGCGCTGGAGACCTGCTTCGGAGGGTTCCGCCGATACGGCAAGCACATCAACTTCTCCGACCCCGCCGTGCAGGAGCGGTTCAACCCGCGCGCGTGCGCCTGGTCCTACGGCCTCAACGTGTTCGATCTCCAGGCTTGGCGCCGGGACCAATGCACCCAGCGATTCCACCAGCTCATGGAAATGAACGAGAACGGCACGCTGTGGGATCCAGCGTCCGTTCTGCCGGCGGGGCTCATGACGTTCTACGGCAACACGAGGCCGCTGGACAAGTCGTGGCACGTGATGGGACTCGGGTACAACCCGCACATCAGGCCGGAGGACATCAAGGGAGCCGCGGTGATACACTTCAACGGGAACATGAAGCCGTGGCTCGACGTCGCCTTCAACCAGTACAAGCATCTCTGGACCAAGTACGTCGACACCGAGATGGAGTTCCTGACATTGTGCAACTTCGGACTCTGATCTTTGCTACGATTTCAATGGTAATGATCAGATGTAGGTTCAGTCGTTTCTGCCTGCCGCTGTTGTTGCAACTTGCAAAAGCAGACGAGTTAATGGCTCTGCTCCGCTAACTGTATTGTGTTTGTCCCCCTTGTCATTTAGGCTGTCTGAACTGAAGAAATCTCTCATGTATTATGGTACTAGTAGATGA]

[+] EMBL AK072229             [CCCTTTTCCTCCGCATTTCGCCTCGGGATTGCTCGACGGCGAGCGATTCCGACTTCACGCGCTCCCATGGCAGGCGGCGGCGGCGGCGGCAGAGCTTCCGCGCAGCGGCGGGCGGCGCTCGCGGCGCTGATCACGCTCCTCTTGCTTGCGTCCCTCGCTTTCCTCCTGTCGGCGACGGGCACCGCCTCCGCCCCGAACTCCGCACCCTTCCGGCTGGCCGCCATTCGCCGCCACGCCGAGGACCACGCCGCCGTTCTCGCCGCCTACGCGGCCCAGGCGCGGAAACTCAGCGCGGCCTCCGCCTCCCAGACGGAGTCTTTCTTGTCTATCTCCGGGCATCTCAGCTCGCTCTCGTCCCGCATCTCCCTGTCCACCGTCGCGCTCTTGGAGAAGGAGACGCGCGGGCAAATCAAGCGCGCCCGCTCCCTGGCAGGCGCCGCCAAGGAGGCGTTCGACACGCAGT CAAGATCCAGAAGCTCTCCGACACCGTCTTCGCCGTCGACCAGCAGCTCCTCCGCGCCCGCCGCGCGGGCCTCCTCAACTCCCGCATCGCCGCCGGCTCCACGCCCAAGTCGCTCCACTGCCTCGTCATGCGCCTCCTCGAGGCACGCCTCGCCAACGCCTCCGCCATCCCCGACGACCCGCCCGTCCCGCCCCCTCAGTTCACCGACCCGGCGCTGTACCACTACGCCATCTTCTCCGACAACGTGCTCGCCGTGTCCGTCGTGGTGGCCTCCGCGGCGCGCGCAGCCGCCGAGCCGGCGCGCCACGTCTTCCACGTGGTCACCGCGCCCATGTACCTCCCGGCCTTCCGCGTCTGGTTCGCGCGCCGGCCGCCGCCGCTCGGCACGCACGTGCAGCTCCTCGCCGTCTCGGACTTCCCGTTCCTGAACGCCTCCGCCTCCCCGGTCATCAGGCAGATCGAGGACGGCAACAGGGACGTGCCGCTGCTCGACTACCTCCGGTTCTACCTCCCGGAGATGTTCCCGGCGCTGCGGCGGGTGGTGCTCCTGGAGGACGACGTGGTGGTGCAGAGGGACCTGGCCGGGCTGTGGCGCGTCGACCTCGGCGGCAAGGTGAACGCCGCGCTGGAGACCTGCTTCGGAGGGTTCCGCCGATACGGCAAGCACATCAACTTCTCCGACCCCGCCGTGCAGGAGCGGTTCAACCCGCGCGCGTGCGCCTGGTCCTACGGCCTCAACGTGTTCGATCTCCAGGCTTGGCGCCGGGACCAATGCACCCAGCGATTCCACCAGCTCATGGAAATGAACGAGAACGGCACGCTGTGGGATCCAGCGTCCGTTCTGCCGGCGGGGCTCATGACGTTCTACGGCAACACGAGGCCGCTGGACAAGTCGTGGCACGTGATGGGACTCGGGTACAACCCGCACATCAGGCCGGAGGACATCAAGGGAGCCGCGGTGATACACTTCAACGGGAACATGAAGCCGTGGCTCGACGTCGCCTTCAACCAGTACAAGCATCTCTGGACCAAGTACGTCGACACCGAGATGGAGTTCCTGACATTGTGCAACTTCGGACTCTGATCTTTGCTACGATTTCAATGGTAATGATCAGATGTAGGTTCAGTCGTTTCTGCCTGCCGCTGTTGTTGCAACTTGCAAAAGCAGACGAGTTAATGGCTCTGCTCCGCTAACTGTATTGTGTTTGTCCCCCTTGTCATTTAGGCTGTCTGAACTGAAGAAATCTCTCATGTATTATGGTACTAGTAGATGA]
[+] EMBL AK108072             [                       CGGGATTGCTCGACGGCGAGCGATTCCGACTTCACGCGCTCCCATGGCAGGCGGCGGCGGCGGCGGCAGAGCTTCCGCGCAGCGGCGGGCGGCGCTCGCGGCGCTGATCACGCTCCTCTTGCTTGCGTCCCTCGCTTTCCTCCTGTCGGCGACGGGCACCGCCTCCGCCCCGAACTCCGCACCCTTCCGGCTGGCCGCCATTCGCCGCCACGCCGAGGACCACGCCGCCGTTCTCGCCGCCTACGCGGCCCAGGCGCGGAAACTCAGCGCGGCCTCCGCCTCCCAGACGGAGTCTTTCTTGTCTATCTCCGGGCATCTCAGCTCGCTCTCGTCCCGCATCTCCCTGTCCACCGTCGCGCTCTTGGAGAAGGAGACGCGCGGGCAAATCAAGCGCGCCCGCTCCCTGGCAGGCGCCGCCAAGGAGGCGTTCGACACGCAGTCCAAGATCCAGAAGCTCTCCGACACCGTCTTCGCCGTCGACCAGCAGCTCCTCCGCGCCCGCCGCGCGGGCCTCCTCAACTCCCGCATCGCCGCCGGCTCCACGCCCAAGTCGCTCCACTGCCTCGTCATGCGCCTCCTCGAGGCACGCCTCGCCAACGCCTCCGCCATCCCCGACGACCCGCCCGTCCCGCCCCCTCAGTTCACCGACCCGGCGCTGTACCACTACGCCATCTTCTCCGACAACGTGCTCGCCGTGTCCGTCGTGGTGGCCTCCGCGGCGCGCGCAGCCGCCGAGCCGGCGCGCCACGTCTTCCACGTGGTCACCGCGCCCATGTACCTCCCGGCCTTCCGCGTCTGGTTCGCGCGCCGGCCGCCGCCGCTCGGCACGCACGTGCAGCTCCTCGCCGTCTCGGACTTCCCGTTCCTGAACGCCTCCGCCTCCCCGGTCATCAGGCAGATCGAGGACGGCAACAGGGACGTGCCGCTGCTCGACTACCTCCGGTTCTACCTCCCGGAGATGTTCCCGGCGCTGCGGCGGGTGGTGCTCCTGGAGGACGACGTGGTGGTGCAGAGGGACCTGGCCGGGCTGTGGCGCGTCGACCTCGGCGGCAAGGTGAACGCCGCGCTGGAGACCTGCTTCGGAGGGTTCCGCCGATACGGCAAGCACATCAACTTCTTCGACCCCGCCGTGCAGGAGCGGTTCAACCCGCGCGCGTGCGCCTGGTCCTACGGCCTCAACGTGTTCGATCTCCAGGCTTGGCGCCGGGACCAATGCACCCAGCGATTCCACCAGCTCATGGAAATGAACGAGAACGGCACGCTGTGGGATCCAGCGTCCGTTCTGCCGGCGGGGCTCATGACGTTCTACGGCAACACGAGGCCGCTGGACAAGTCGTGGCACGTGATGGGACTCGGGTACAACCCGCACATCAGGCCGGAGGACATCAAGGGAGCCGCGGTGATACACTTCAACGGGAACATGAAGCCGTGGCTCGACGTCGCCTTCAACCAGTACAAGCATCTCTGGACCAAGTACGTCGACACCGAGATGGAGTTCCTGACATTGTGCAACTTCGGACTCTGATCTTTGCTACGATTTCAATGGTAATGATCAGATGTAGGTTCAGTCGTTTCTGCCTGCCGCTGTTGTTGCAACTTGCAAAAGCAGACGAGTTAATGGCT                                                                                            ]
[+] EMBL CB673698             [                                       CGAGCGATTCCGACTTCACGCGCTCCCATGGCAGGCGGCGGCGGCGGCGGCAGAGCTTCCGCGCAGCGGCGGGCGGCGCTCGCGGCGCTGATCACGCTCCTCTTGCTTGCGTCCCTCGCTTTCCTCCTGTCGGCGACGGGCACCGCCTCCGCCCCGAACTCCGCACCCTTCCGGCTGGCCGCCATTCGCCGCCACGCCGAGGACCACGCCGCCGTTCTCGCCGCCTACGCGGCCCAGGCGCGGAAACTCAGCGCGGCCTCCGCCTCCCAGACGGAGTCTTTCTTGTCTATCTCCGGGCATCTCAGCTCGCTCTCGTCCCGCATCTCCCTGTCCACCGTCGCGCTCTTGGAGAAGGAGACGCGCGGGCAAATCAAGCGCGCCCGCTCCCTGGCAGGCGCCGCCAAGGAGGCGTTCGACACGCAGTCCAAGATCCAGAAGCTCTCCGACACCGTCTTCGCCGTCGACCAGCAGCTCCTCCGCGCCCGCCGCGCGGGCCTCCTCAACTCCCGCATCGCCGCCGGCTCCACGCCCAAGTCGCTCCACTGCCTCGTCATGCGCCTCCTCGAGGCACGCCTCGCCAACGCCTCCGCCATCCCCGACGACCCGCCCGTCCCGCCCCCTCAGTTCACCGACCCGGCGCTGTACCACTACGCCATCTTCTCCGACAACGTGCTCGCCGTGTCCGTCGTGGTGGCCTCCGCGGCGCGCGCAGCCGCCGAGCCGGCGCGCCACGTCTTCCACGTGGTCACCGCGCCCATGTACCTCCCGGCCTTCCGCGTCTGGTTCGCGCGCCGGCCGCCGCCGCTCGGNACGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_4038#0 CCCTTTTCCTCCGCATTTCGCCTCGGGATTGCTCGACGGCGAGCGATTCCGACTTCACGC GCTCCCATGGCAGGCGGCGGCGGCGGCGGCAGAGCTTCCGCGCAGCGGCGGGCGGCGCTC GCGGCGCTGATCACGCTCCTCTTGCTTGCGTCCCTCGCTTTCCTCCTGTCGGCGACGGGC ACCGCCTCCGCCCCGAACTCCGCACCCTTCCGGCTGGCCGCCATTCGCCGCCACGCCGAG GACCACGCCGCCGTTCTCGCCGCCTACGCGGCCCAGGCGCGGAAACTCAGCGCGGCCTCC GCCTCCCAGACGGAGTCTTTCTTGTCTATCTCCGGGCATCTCAGCTCGCTCTCGTCCCGC ATCTCCCTGTCCACCGTCGCGCTCTTGGAGAAGGAGACGCGCGGGCAAATCAAGCGCGCC CGCTCCCTGGCAGGCGCCGCCAAGGAGGCGTTCGACACGCAGTCCAAGATCCAGAAGCTC TCCGACACCGTCTTCGCCGTCGACCAGCAGCTCCTCCGCGCCCGCCGCGCGGGCCTCCTC AACTCCCGCATCGCCGCCGGCTCCACGCCCAAGTCGCTCCACTGCCTCGTCATGCGCCTC CTCGAGGCACGCCTCGCCAACGCCTCCGCCATCCCCGACGACCCGCCCGTCCCGCCCCCT CAGTTCACCGACCCGGCGCTGTACCACTACGCCATCTTCTCCGACAACGTGCTCGCCGTG TCCGTCGTGGTGGCCTCCGCGGCGCGCGCAGCCGCCGAGCCGGCGCGCCACGTCTTCCAC GTGGTCACCGCGCCCATGTACCTCCCGGCCTTCCGCGTCTGGTTCGCGCGCCGGCCGCCG CCGCTCGGCACGCACGTGCAGCTCCTCGCCGTCTCGGACTTCCCGTTCCTGAACGCCTCC GCCTCCCCGGTCATCAGGCAGATCGAGGACGGCAACAGGGACGTGCCGCTGCTCGACTAC CTCCGGTTCTACCTCCCGGAGATGTTCCCGGCGCTGCGGCGGGTGGTGCTCCTGGAGGAC GACGTGGTGGTGCAGAGGGACCTGGCCGGGCTGTGGCGCGTCGACCTCGGCGGCAAGGTG AACGCCGCGCTGGAGACCTGCTTCGGAGGGTTCCGCCGATACGGCAAGCACATCAACTTC TCCGACCCCGCCGTGCAGGAGCGGTTCAACCCGCGCGCGTGCGCCTGGTCCTACGGCCTC AACGTGTTCGATCTCCAGGCTTGGCGCCGGGACCAATGCACCCAGCGATTCCACCAGCTC ATGGAAATGAACGAGAACGGCACGCTGTGGGATCCAGCGTCCGTTCTGCCGGCGGGGCTC ATGACGTTCTACGGCAACACGAGGCCGCTGGACAAGTCGTGGCACGTGATGGGACTCGGG TACAACCCGCACATCAGGCCGGAGGACATCAAGGGAGCCGCGGTGATACACTTCAACGGG AACATGAAGCCGTGGCTCGACGTCGCCTTCAACCAGTACAAGCATCTCTGGACCAAGTAC GTCGACACCGAGATGGAGTTCCTGACATTGTGCAACTTCGGACTCTGATCTTTGCTACGA TTTCAATGGTAATGATCAGATGTAGGTTCAGTCGTTTCTGCCTGCCGCTGTTGTTGCAAC TTGCAAAAGCAGACGAGTTAATGGCTCTGCTCCGCTAACTGTATTGTGTTTGTCCCCCTT GTCATTTAGGCTGTCTGAACTGAAGAAATCTCTCATGTATTATGGTACTAGTAGATGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)