cluster # 4062

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Oryza sativa
cluster # 4062 cluster # 4062 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4062#0 length = 2142 sequences # 3
consensusID : consensus_4062#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2142
fasta sequence
                              [TTTCTCCTCCTCCCCCTTAAACCCTCGCCTCTCCCACCTCCCGCCGCTTCCCCCTCTCGCTACGCCGCCGCCGCCGTCGAAGCTTGACAGCCGGAGTCCTCCGCCGAGCCGAGCCGCGCTAGCAGCCTGCGGCTCCCCTCCCCCCATCCCTCCCCCGGCCATGGCGCCTCGTCCGCGGAAGCGGGTCTCGCGGCCCAAGCCACGCGCCACCTCCCGCGGCCGCGGCGGCGGGGATGAGGACCCCTTCTTCGAGTCCGAGCCCAAGCGGCGCCGCGGGGGCGGCCGCGACGAGGACATCGAGAGCGAGGACAGCGACCTGGAGGGCGTGGCAGCGGCTGCTGCTGGTGGCGTCGGCGACGATGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGCAGGAGACGGCGGGGGAGAAGAAGATGCGGATCGCGAAGGAGCTTCTCAAGAAGGTGACGGACGCGGCGAGGAGGAGGAGGGAGGATGACGAGGACGAGGACGAGGGCGAGGAAGCCGGCCGGAGGCGGGTCGCCGATATCCTCCTCAAGAGGCAATTCGAGGAGAGTGGCAGGAAGCGGATGGAGCTCGCCGACAGGATATTACAACCAGATCCTGAGGATGGCTTTAAGATGCTCGTGAAGCACCGACAACCAGTTACTGCTGTTGTTTTATCCAAGGACAGTGATAAGGGATTTTCAGCATCAAAGGATGGAGTCATTGTGCATTGGGATGTTGAAACTGGAAAAAGTGAGAAGTATTTATGGCCAAGTGAAAATGTCTTGGTTTCTCATCATGCTAAGCCACCTCTATCAGCTAAAAGAAGTAAGCAAGTATTAGCTCTAGCTGTTAGTGCAGATGGTCGTTACTTGGCAAGCGGAGGTTTGGATCGTCACATCCATTTATGGGATGTTCGGTCACGGGAGCACATACAGGCATTTAGTGGTCATCGAGGAGCAATATCTTGTCTTTCCTTTGGACCAGACTCATCGGAGCTATTCTCTGGTTCTTTTGACCGTAAAATAATGCAGTGGAATGCAGAAGACAGAACGTACATGAACTGCCTATTTGGCCATCAGAACGAAGTCTTGACAATGGATGCACTTAGTAAAGATAGGCTTTTGACTGTAGCACGGGACCGAACAATGCATCTTTGGAAGATACCAGAAGAATCACAACTACTGTTCCGTGCTCCTGCTACTGCATCATTGGAGTGTTGCTGCTTTATTGATGACAAGGAATTTTTAACTGGATCTGATGATGGAAGTGTTGAGCTTTGGAGCATTATGAGAAAGAAGCCTACTCACATAATAAGAAATGCTCATCCAGTATTCCGTAACAACCTTAATTCGCTTGAAAATAATGTTGAGGAAAATGGCATACATAAACCTGAAAGTGTCTCATCAGCCCAATCATGGGTTAGTGCTATTGCTGCAAGAAGAGGTTCTGATCTTGCTGCATCAGGAGCAGCAAATGGTTCAGTTCGTCTTTGGGCTATTGAACCTGATTCTAAGGGCATTCGGCCATTATTTAGTTTGAGACTGGATGGATTTGTTAATTCTCTCGCCATCCCGAAATCTGGACGCTTTATTGTTGCTGGTGTGGGCCAGGAGCCTCGTCTTGGAAGATGGGGCCGTGTCCGATCAGCTCAAAATGGAGTTGTAATCCATCCAATCCGACTAAAAGAAGAGAGCGAGGACTTGTAGGGTAGTAGTAGATGGTTGATGCCGAAAAACCCCTTAAATGTTGTTAAGTCACACAAAGGACAAATCCCTTCCACCTTGCA-TTTTTTGCAACCATTCCCACCGATGAAATTCGATACAAGAGGCTGAACGGGTTACCTTCACAAGCAATGGGAATTTGGAGGGGGTGTTACAGACCATTTGAGCTGAAGAATTGAGATGTATTCTGTAGAGGAAGTCCCGTCAGGCAATTTTGTAGCATTGCTTCCTTAAGTTTAAAGACAGATTTTTTTTATGTATCAAACAAGTAGGATAAGGCGGTTTTGAAAATTGGCCTTTGATTCAAAAATGCCTTGATCAATTGTTCTCTACAATTGGAGTGGTTTATATCAGATAGAGAATTGCACACGGGAGGATTTTGAGGCCCTGAACTATGTACCAATACTTTATTGATCTAATCCCTTAAAACT]

[+] EMBL CB675414             [TTTCTCCTCCTCCCCCTTAAACCCTCGCCTCTCCCACCTCCCGCCGCTTCCCCCTCTCGCTACGCCGCCGCCGCCGTCGAAGCTTGACAGCCGGAGTCCTCCGCCGAGCCGAGCCGCGCTAGCAGCCTGCGGCTCCCCTCCCCCCATCCCTCCCCCGGCCATGGCGCCTCGTCCGCGGAAGCGGGTCTCGCGGCCCAAGCCACGCGCCACCTCCCGCGGCCGCGGCGGCGGGGATGAGGACCCCTTCTTCGAGTCCGAGCCCAAGCGGCGCCGCGGGGGCGGCCGCGACGAGGACATCGAGAGCGAGGACAGCGACCTGGAGGGCGTGGCAGCGGCTGCTGCTGGTGGCGTCGGCGACGATGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGCAGGAGACGGCGGGGGAGAAGAAGATGCGGATCGCGAAGGAGCTTCTCAAGAAGGTGACGGACGCGGCGAGGAGGAGGAGGGAGGATGACGAGGACGAGGACGAGGGCGAGGAAGCCGGCCGGAGGCGGGTCGCCGATATCCTCCTCAAGAGGCAATTCGAGGAGAGTGGCAGGAAGCGGATGGAGCTCGCCGACAGGATATTACAACCAGATCCTGAGGATGGCTTTAAGATGCTCGTGAAGCACCGACAACCAGTTACTGCTGTTGTTTTATCCAAGGACAGTGATAAGGGATTTTCAGCATCAAAGGATGGAGTCATTGTGCATTGGGATGTTGAAACTGGAAAAAGTGAGAAGTATTTATGGCCAAGTGAAAATGTCTTGGTTTCTCATCATGCTAAGCCACCTCTATCAGCTAAAAGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK101109             [                 TAAACCCTCGCCTCTCCCACCTCCCGCCGCTTCCCCCTCTCGCTACGCCGCCGCCGCCGTCGAAGCTTGACAGCCGGAGTCCTCCGCCGAGCCGAGCCGCGCTAGCAGCCTGCGGCTCCCCTCCCCCCATCCCTCCCCCGGCCATGGCGCCTCGTCCGCGGAAGCGGGTCTCGCGGCCCAAGCCACGCGCCACCTCCCGCGGCCGCGGCGGCGGGGATGAGGACCCCTTCTTCGAGTCCGAGCCCAAGCGGCGCCGCGGGGGCGGCCGCGACGAGGACATCGAGAGCGAGGACAGCGACCTGGAGGGCGTGGCAGCGGCTGCTGCTGGTGGCGTCGGCGACGATGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGCAGGAGACGGCGGGGGAGAAGAAGATGCGGATCGCGAAGGAGCTTCTCAAGAAGGTGACGGACGCGGCGAGGAGGAGGAGGGAGGATGACGAGGACGAGGACGAGGGCGAGGAAGCCGGCCGGAGGCGGGTCGCCGATATCCTCCTCAAGAGGCAATTCGAGGAGAGTGGCAGGAAGCGGATGGAGCTCGCCGACAGGATATTACAACCAGATCCTGAGGATGGCTTTAAGATGCTCGTGAAGCACCGACAACCAGTTACTGCTGTTGTTTTATCCAAGGACAGTGATAAGGGATTTTCAGCATCAAAGGATGGAGTCATTGTGCATTGGGATGTTGAAACTGGAAAAAGTGAGAAGTATTTATGGCCAAGTGAAAATGTCTTGGTTTCTCATCATGCTAAGCCACCTCTATCAGCTAAAAGAAGTAAGCAAGTATTAGCTCTAGCTGTTAGTGCAGATGGTCGTTACTTGGCAAGCGGAGGTTTGGATCGTCACATCCATTTATGGGATGTTCGGTCACGGGAGCACATACAGGCATTTAGTGGTCATCGAGGAGCAATATCTTGTCTTTCCTTTGGACCAGACTCATCGGAGCTATTCTCTGGTTCTTTTGACCGTAAAATAATGCAGTGGAATGCAGAAGACAGAACGTACATGAACTGCCTATTTGGCCATCAGAACGAAGTCTTGACAATGGATGCACTTAGTAAAGATAGGCTTTTGACTGTAGCACGGGACCGAACAATGCATCTTTGGAAGATACCAGAAGAATCACAACTACTGTTCCGTGCTCCTGCTACTGCATCATTGGAGTGTTGCTGCTTTATTGATGACAAGGAATTTTTAACTGGATCTGATGATGGAAGTGTTGAGCTTTGGAGCATTATGAGAAAGAAGCCTACTCACATAATAAGAAATGCTCATCCAGTATTCCGTAACAACCTTAATTCGCTTGAAAATAATGTTGAGGAAAATGGCATACATAAACCTGAAAGTGTCTCATCAGCCCAATCATGGGTTAGTGCTATTGCTGCAAGAAGAGGTTCTGATCTTGCTGCATCAGGAGCAGCAAATGGTTCAGTTCGTCTTTGGGCTATTGAACCTGATTCTAAGGGCATTCGGCCATTATTTAGTTTGAGACTGGATGGATTTGTTAATTCTCTCGCCATCCCGAAATCTGGACGCTTTATTGTTGCTGGTGTGGGCCAGGAGCCTCGTCTTGGAAGATGGGGCCGTGTCCGATCAGCTCAAAATGGAGTTGTAATCCATCCAATCCGACTAAAAGAAGAGAGCGAGGACTTGTAGGGTAGTAGTAGATGGTTGATGCCGAAAAACCCCTTAAATGTTGTTAAGTCACACAAAGGACAAATCCCTTCCACCTTGCA TTTTTTGCAACCATTCCCACCGATGAAATTCGATACAAGAGGCTGAACGGGTTACCTTCACAAGCAATGGGAATTTGGAGGGGGTGTTACAGACCATTTGAGCTGAAGAATTGAGATGTATTCTGTAGAGGAAGTCCCGTCAGGCAATTTTGTAGCATTGCTTCCTTAAGTTTAAAGACAGATTTTTTTTATGTATCAAACAAGTAGGATAAGGCGGTTTTGAAAATTGGCCTTTGATTCAAAAATGCCTTGATCAATTGTTCTCTACAATTGGAGTGGTTTATATCAGATAGAGAATTGCACACGGGAGGATTTTGAGGCCCTGAACTATGTACCAATACTTTATTGATCTAATCCCTTAAAACT]
[-] EMBL CB675415             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATGAGAAAGAAGCCTACTCACATAATAAGAAATGCTCATCCAGTATTCCGTAACAACCTTAATTCGCTTGAAAATAATGTTGAGGAAAATGGCATACATAAACCTGAAAGTGTCTCATCAGCCCAATCATGGGTTAGTGCTATTGCTGCAAGAAGAGGTTCTGATCTTGCTGCATCAGGAGCAGCAAATGGTTCAGTTCGTCTTTGGGCTATTGAACCTGATTCTAAGGGCATTCGGCCATTATTTAGTTTGAGACTGGATGGATTTGTTAATTCTCTCGCCATCCCGAAATCTGGACGCTTTATTGTTGCTGGTGTGGGCCAGGAGCCTCGTCTTGGAAGATGGGGCCGTGTCCGATCAGCTCAAAATGGAGTTGTAATCCATCCAATCCGACTAAAAGAAGAGAGCGAGGACTTGTAGGGTAGTAGTAGATGGTTGATGCCGAAAAACCCCTTAAATGTTGTTAAGTCACACAAAGGACAAATCCCTTCCCCCTTGCATTTTTTTGCAACCATTCCCACCGATGAAATTCGATACAAGAGGCTGAACGGGTTACCTTCACAAGCAATGGGAATTTGGAGGGGGTGTTACAGACCATTTGAGCTGAAGAATTGAGATGTATTCTGTAGAGGAAGTCCCGTCAGGCAATTTTGTAGCATTGCTTCCTTAAGTTTAAAGACAGATTTTTTTTATGTATCAAACAAGTAGGATAAGGCGGTTTTGAAAATTGGCCTTTGATTCAAAAATGCCTTGATCAATTGTTCTTTACAATTGGAGTGGTTTATATCAGATAGA                                                                        ]




>consensus_4062#0
TTTCTCCTCCTCCCCCTTAAACCCTCGCCTCTCCCACCTCCCGCCGCTTCCCCCTCTCGC
TACGCCGCCGCCGCCGTCGAAGCTTGACAGCCGGAGTCCTCCGCCGAGCCGAGCCGCGCT
AGCAGCCTGCGGCTCCCCTCCCCCCATCCCTCCCCCGGCCATGGCGCCTCGTCCGCGGAA
GCGGGTCTCGCGGCCCAAGCCACGCGCCACCTCCCGCGGCCGCGGCGGCGGGGATGAGGA
CCCCTTCTTCGAGTCCGAGCCCAAGCGGCGCCGCGGGGGCGGCCGCGACGAGGACATCGA
GAGCGAGGACAGCGACCTGGAGGGCGTGGCAGCGGCTGCTGCTGGTGGCGTCGGCGACGA
TGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGCAGGAGACGGCGGGGGAGAAGAAGATGCG
GATCGCGAAGGAGCTTCTCAAGAAGGTGACGGACGCGGCGAGGAGGAGGAGGGAGGATGA
CGAGGACGAGGACGAGGGCGAGGAAGCCGGCCGGAGGCGGGTCGCCGATATCCTCCTCAA
GAGGCAATTCGAGGAGAGTGGCAGGAAGCGGATGGAGCTCGCCGACAGGATATTACAACC
AGATCCTGAGGATGGCTTTAAGATGCTCGTGAAGCACCGACAACCAGTTACTGCTGTTGT
TTTATCCAAGGACAGTGATAAGGGATTTTCAGCATCAAAGGATGGAGTCATTGTGCATTG
GGATGTTGAAACTGGAAAAAGTGAGAAGTATTTATGGCCAAGTGAAAATGTCTTGGTTTC
TCATCATGCTAAGCCACCTCTATCAGCTAAAAGAAGTAAGCAAGTATTAGCTCTAGCTGT
TAGTGCAGATGGTCGTTACTTGGCAAGCGGAGGTTTGGATCGTCACATCCATTTATGGGA
TGTTCGGTCACGGGAGCACATACAGGCATTTAGTGGTCATCGAGGAGCAATATCTTGTCT
TTCCTTTGGACCAGACTCATCGGAGCTATTCTCTGGTTCTTTTGACCGTAAAATAATGCA
GTGGAATGCAGAAGACAGAACGTACATGAACTGCCTATTTGGCCATCAGAACGAAGTCTT
GACAATGGATGCACTTAGTAAAGATAGGCTTTTGACTGTAGCACGGGACCGAACAATGCA
TCTTTGGAAGATACCAGAAGAATCACAACTACTGTTCCGTGCTCCTGCTACTGCATCATT
GGAGTGTTGCTGCTTTATTGATGACAAGGAATTTTTAACTGGATCTGATGATGGAAGTGT
TGAGCTTTGGAGCATTATGAGAAAGAAGCCTACTCACATAATAAGAAATGCTCATCCAGT
ATTCCGTAACAACCTTAATTCGCTTGAAAATAATGTTGAGGAAAATGGCATACATAAACC
TGAAAGTGTCTCATCAGCCCAATCATGGGTTAGTGCTATTGCTGCAAGAAGAGGTTCTGA
TCTTGCTGCATCAGGAGCAGCAAATGGTTCAGTTCGTCTTTGGGCTATTGAACCTGATTC
TAAGGGCATTCGGCCATTATTTAGTTTGAGACTGGATGGATTTGTTAATTCTCTCGCCAT
CCCGAAATCTGGACGCTTTATTGTTGCTGGTGTGGGCCAGGAGCCTCGTCTTGGAAGATG
GGGCCGTGTCCGATCAGCTCAAAATGGAGTTGTAATCCATCCAATCCGACTAAAAGAAGA
GAGCGAGGACTTGTAGGGTAGTAGTAGATGGTTGATGCCGAAAAACCCCTTAAATGTTGT
TAAGTCACACAAAGGACAAATCCCTTCCACCTTGCATTTTTTGCAACCATTCCCACCGAT
GAAATTCGATACAAGAGGCTGAACGGGTTACCTTCACAAGCAATGGGAATTTGGAGGGGG
TGTTACAGACCATTTGAGCTGAAGAATTGAGATGTATTCTGTAGAGGAAGTCCCGTCAGG
CAATTTTGTAGCATTGCTTCCTTAAGTTTAAAGACAGATTTTTTTTATGTATCAAACAAG
TAGGATAAGGCGGTTTTGAAAATTGGCCTTTGATTCAAAAATGCCTTGATCAATTGTTCT
CTACAATTGGAGTGGTTTATATCAGATAGAGAATTGCACACGGGAGGATTTTGAGGCCCT
GAACTATGTACCAATACTTTATTGATCTAATCCCTTAAAACT
clustalw multiple alignements is not computed in this case