cluster # 4094

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Oryza sativa
cluster # 4094 cluster # 4094 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4094#0 length = 752 sequences # 3

consensusID : consensus_4094#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 752
fasta sequence

                              [CTCTCTCGACTTCTCGAATGGTCTCGACCATCTTCGCTAAACCCTTCCTTGGTCGCCGCCGCGCCGCAAAGCCTCCGTCCGTTCCGCACCGCCGCTCTCTTCCCCGCCACCGTCGGTCGCTGGCTGAGTATGGCGGCGGCCGCTGCTCGCGCCGGGTTCCGGCGGATGTTCTCCGTCTCGGGCTTCACGCCGCCGCCTCCCCCCGCCGCCCGCCCCTTGGCGGACCCCTGCAACAACCTCTTCGTCTCAGGGTTGAATAAACGCACGACATCTGACGGACTTAGGGAAGCCTTCTCGAAATTCGGTCAGGTTATTGAAGC-TAGAGT-AATCACTGATAGAATATCTGGATACT-CTCGAGGATTTGG-CTTTGTCAAATATGC-AACT-GTTG-AAGAANCCGGTGA-GGGCATAAAAGGCATGGAT-GGAAAGTTCCCTCGATGGTTGGGTGATATTTGCCGAGTACGCCAAGCAGAGAGAAGCACAGCAGCCGGCCCAACCAGCAGCATCAACTAGTTACCAATACTCCAACCAATGATAGTTGTCTCTACGATCAGGATTACCTTCTATTGGACAATATTGTTCGCTATTTTACCATGTGAAAACTGAAAATCACTCTCCTTGATATTTCGTCAGGGAGAAATTTTAGTGTGCACGGCATGAACATCTCCTTAGTAACTTACGGTGCCGTTTTGTCTGCTACTGTCTGCTGGGTGACTGTACTCTGTGAGCTTATGTAACTATACAACTGCCTTCAT]

[+] EMBL AK120874             [CTCTCTCGACTTCTCGAATGGTCTCGACCATCTTCGCTAAACCCTTCCTTGGTCGCCGCCGCGCCGCAAAGCCTCCGTCCGTTCCGCACCGCCGCTCTCTTCCCCGCCACCGTCGGTCGCTGGCTGAGTATGGCGGCGGCCGCTGCTCGCGCCGGGTTCCGGCGGATGTTCTCCGTCTCGGGCTTCACGCCGCCGCCTCCCCCCGCCGCCCGCCCCTTGGCGGACCCCTGCAACAACCTCTTCGTCTCAGGGTTGAATAAACGCACGACATCTGACGGACTTAGGGAAGCCTTCTCGAAATTCGGTCAGGTTATTGAAGC TAGAGT AATCACTGATAGAATATCTGGATACT CTCGAGGATTTGG CTTTGTCAAATATGC AACT GTTG AAGAAGCCGGTGA GGGCATAAAAGGCATGGAT GGAAAGTT CCTCGATGGTTGGGTGATATTTGCCGAGTACGCCAAGCAGAGAGAAGCACAGCAGCCGGCCCAACCAGCAGCATCAACTAGTTACCAATACTCCAACCAATGATAGTTGTCTCTACGATCAGGATTACCTTCTATTGGACAATATTGTGCGCTATTTTACCATGTGAAAACTGAAAATCACTCTCCTTGATATTTCGTCAGGGAGAAATTTTAGTGTGCACGGCATGAACATCTCCTTAGTAACTTACGGTGCCGTTTTGTCTGCTACTGTCTGCTGGGTGACTGTACTCTGTGAGCTTATGTAACTATACAACTGCCTTCAT]
[-] EMBL AU066230             [                                                                                                                                                                                                                                                                                      ACTTAGGGAACCCTTCNCGAAATTCGGNCAGGTTATTGAAGCNTAGAGTAAATCACTGATAGAATATCTGGATACTCCTCGAGGATTTGG CTTTGTCAAATATGC AACTGGTTG AAGAANCCGGTGA GGGCATAAAAGGCATGGAT GGAAAGTTCCCTCGATGGTTGGGTGATATTTGCCGAGTACGCCAAGCAGAGAGAAGCACAGCAGCCGGCCCAACCAGCAGCATCAACTAGTTACCAATACTCCAACCAATGATAGTTGTCTCTACGATCAGGATTACCTTCTATTGGACAATATTGTTCGCTATTTTACCATGTGAAAACTGAAAATCACTCTCCTTGATATTTCGTCAGGGAGAAATTTTAGTGTGCACGGCATGAACATCTCCTTAGTAACTTACGGTGCCGTTTTGTCTGCTACTGTCTGCTGGGTGACTGTACTCTGTGAGCTTATGTAACTATACAACTG       ]
[-] EMBL AU066228             [                                                                                                                                                                                                                                                                                                                                                                     CGAGNATTTGGCCTTTGTCAAATATGCAAACT GTTGAAAAAANCCGGTNAGGGGCATAAAAGGCATGGATGGGAAAGTTCCCTCGATGGTTGGGTGATATTTGCCGAGTACGCCAAGCAGAGAGAAGCACAGCAGCCGGCCCAACCAGCAGCATCAACTAGTTACCAATACTCCAACCAATGATAGTTGTCTCTACGATCAGGATTACCTTCTATTGGACAATATTGTTCGCTATTTTACCATGTGAAAACTGAAAATCACTCTCCTTGATATTTCGTCAGGGAGAAATTTTAGTGTGCACGGCATGAACATCTCCTTAGTAACTTACGGTGCCGTTTTGTCTGCTACTGTCTGCTGGGTGACTGTACTCTGTGAGCTTATGTAACTATACAACTG       ]




>consensus_4094#0
CTCTCTCGACTTCTCGAATGGTCTCGACCATCTTCGCTAAACCCTTCCTTGGTCGCCGCC
GCGCCGCAAAGCCTCCGTCCGTTCCGCACCGCCGCTCTCTTCCCCGCCACCGTCGGTCGC
TGGCTGAGTATGGCGGCGGCCGCTGCTCGCGCCGGGTTCCGGCGGATGTTCTCCGTCTCG
GGCTTCACGCCGCCGCCTCCCCCCGCCGCCCGCCCCTTGGCGGACCCCTGCAACAACCTC
TTCGTCTCAGGGTTGAATAAACGCACGACATCTGACGGACTTAGGGAAGCCTTCTCGAAA
TTCGGTCAGGTTATTGAAGCTAGAGTAATCACTGATAGAATATCTGGATACTCTCGAGGA
TTTGGCTTTGTCAAATATGCAACTGTTGAAGAANCCGGTGAGGGCATAAAAGGCATGGAT
GGAAAGTTCCCTCGATGGTTGGGTGATATTTGCCGAGTACGCCAAGCAGAGAGAAGCACA
GCAGCCGGCCCAACCAGCAGCATCAACTAGTTACCAATACTCCAACCAATGATAGTTGTC
TCTACGATCAGGATTACCTTCTATTGGACAATATTGTTCGCTATTTTACCATGTGAAAAC
TGAAAATCACTCTCCTTGATATTTCGTCAGGGAGAAATTTTAGTGTGCACGGCATGAACA
TCTCCTTAGTAACTTACGGTGCCGTTTTGTCTGCTACTGTCTGCTGGGTGACTGTACTCT
GTGAGCTTATGTAACTATACAACTGCCTTCAT

clustalw multiple alignements is not computed in this case