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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4103#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 4662 fasta sequence
[CATGGGCTTCTTGATCCTATCTCCAGGTTTTTAGGCTTTACGATGAGTGGTTTGCGTAACTTCTGCTTTTATTCTTGCTGATCAGAGAGCAGTTCCTGGTTTTTGTTATGATGGTGTTGTTTCTTTTGGGGGCTAAGACCAAGATAATAGTATTAGTATATCCTTGTGGAGTTGTTGGAGCTATAGTGGCAACTGCCAAACACAGCCCAACCAGCATTGCTTCGAGTCCTTCCACTAGATGTTGATTCAAGTAGGATAGGTTTGCTTGTTTCATGTTCTTGTACATTTGAGCTGACAATCGCATGAAAGCTGAGTGTTCCTGTTCTTTTCTAATTGTTCAGGATGCATTTCTGAGAGGGCGTAATGGTTCAGACTGCAGAAGGATGTGTATTGCACAGTTTTATCTGTCAGTCATCTATATCCTACTTGAAGTTACAAGGCTACATCTTATAAGATAATTGTTACAGTCCCAAAAAGAATAACGTGGAAATGGTATCCAATAGTTTCTGGCTTTTCATCCTGCTAGTGAGCTTCATCCCCATTTCTGCTTGGGCAGAATCACGTGATATAAGTACTCTGTTCACTCTGAGGGATTCAATCACCGAAGGAAAAGGCTTTCTCCGTAACTGGTTTGATTCGGAAACTCCCCCATGCAGCTGGTCAGGCATAACTTGCATAGGACATAATGTTGTGGCGATTGATTTGTCCTCTGTTCCACTCTATGCTCCGTTTCCATTATGCATTGGGGCATTCCAGTCACTTGTTCGGCTCAACTTCAGTGGATGTGGGTTTTCCGGAGAGCTTCCGGAAGCTTTGGGAAATTTGCAGAATCTCCAGTACCTAGACTTGAGCAATAACGAGCTTACTGGGCCAATACCTATCTCACTATATAACCTGAAGATGCTGAAGGAAATGGTGCTTGACTACAACTCCTTGTCAGGACAACTTAGTCCTGCTATTGCTCAGCTGCAGCACCTTACTAAGCTATCTATATCCATGAATTCCATCTCCGGAAGCCTTCCACCAGATCTGGGCAGCCTGAAGAACCTGGAGTTGTTGGACATTAAGATGAACACATTCAATGGATCTATACCAGCAACTTTTGGGAACCTGTCTTGTCTCTTGCACTTTGATGCTAGCCAGAATAACCTAACTGGATCAATATTCCCTGGAATAACCTCGTTGACAAACCTATTGACACTTGATCTATCATCAAACAGTTTTGAGGGAACAATTCCTAGGGAGATTGGTCAACTGGAAAATCTGGAATTACTGATTCTAGGAAAGAATGATCTCACTGGAAGGATTCCACAAGAGATTGGTAGTCTGAAGCAGCTTAAGTTACTTCATCTCGAGGAATGTCAGTTCACAGGCAAAATACCTTGGTCAATCAGTGGACTCAGCAGCTTGACAGAACTTGACATATCAGATAACAACTTTGACGCTGAGCTCCCATCATCCATGGGTGAGCTTGGCAATCTAACACAGCTGATTGCAAAGAATGCTGGGCTCAGTGGGAACATGCCAAAAGAACTTGGGAATTGCAAGAAGCTTACTGTTATAAACCTGTCATTCAATGCCCTTATTGGACCTATTCCTGAAGAATTTGCAGATTTAGAGGCTATTGTCTCATTTTTTGTGGAAGGAAATAAACTATCGGGTCGTGTCCCAGATTGGATTCAGAAATGGAAAAATGCAAGGTCCATCAGGTTGGGACAGAACAAATTCAGTGGACCTTTGCCAGTGCTGCCATTGCAGCATCTGCTAAGTTTCGCTGCAGAATCCAACCTTCTCTCAGGTTCTATACCTTCTCACATATGCCAAGCCAACTCCTTGCATTCACTCTTATTGCATCATAACAATCTGACTGGGACTATTGATGAGGCATTTAAAGGGTGCACGAACCTCACTGAATTGAACTTGTTAGACAACCATATTCATGGGGAGGTACCAGGATATTTAGCAGAATTACCCCTGGTTACTCTGGAGTTGTCACAAAACAAATTCGCAGGGATGTTACCTGCGGAGCTGTGGGAGTCAAAAACCCTTCTAGAGATATCTCTCAGTAACAATGAAATTACCGGCCCAATACCTGAGAGTATTGGTAAACTCTCTGTATTGCAAAGGTTGCATATAGACAATAACTTACTCGAAGGGCCTATCCCTCAGTCTGTTGGTGATCTAAGGAATCTGACCAATCTATCCCTGCGTGGCAATAGGTTATCTGGGATCATTCCACTAGCACTTTTCAACTGCAGAAAACTTGCCACGCTGGACTTGAGCTATAACAATCTGACTGGGAACATTCCAAGTGCCATATCTCACTTGACATTGCTTGATAGCTTGATTTTGTCTTCCAACCAGCTGTCTGGTTCTATCCCTGCTGAGATTTGCGTGGGATTTGAGAATGAGGCTCACCCTGACTCAGAGTTTCTTCAGCACCATGGTCTTCTTGATCTGTCATACAACCAATTGACTGGTCAGATCCCAACATCTATAAAGAACTGTGCAATGGTGATGGTGCTCAACCTCCAAGGCAATTTGCTGAATGGCACCATTCCTGTGGAGCTTGGCGAGCTAACAAATCTTACATCCATTAACTTGTCATTTAATGAATTTGTTGGACCAATGCTTCCATGGTCTGGACCTTTGGTTCAATTGCAAGGCCTTATTCTGTCCAATAACCACCTAGATGGCTCCATTCCTGCTAAGATAGGCCAAATCCTTCCCAAAATTGCAGTGCTAGACTTGTCAAGCAATGCACTCACTGGCACTCTACCACAGTCTTTGCTCTGCAACAATTACCTAAACCATCTGGATGTCAGCAACAACCACCTATCTGGGCATATCCAGTTCTCTTGCCCCGATGGCAAAGAATACTCAAGTACACTGCTCTTCTTCAATTCAAGCAGCAACCATTTCTCAGGGAGCCTAGATGAGTCTATCTCGAACTTCACACAATTGTCTACTCTTGATATCCACAACAATAGCCTCACTGGAAGGTTGCCTTCAGCACTTTCTGATCTCAGTTCTTTGAATTATCTTGATCTGTCGAGCAACAATCTCTATGGTGCCATACCCTGTGGAATCTGCAATATATTTGGCCTCTCATTTGCCAACTTCTCAGGTAACTATATTGACATGTACAGCTTGGCAGATTGTGCTGCAGGAGGCATTTGTTCTACTAATGGTACTGATCATAAAGCATTGCATCCATATCATCGGGTTCGAAGGGCAATTACCATCTGTGCCTTTACATTCGTCATCATCATTGTTTTAGTGCTTCTGGCTGTTTATCTGAGACGGAAGCTGGTTAGAAGCAGGCCTTTGGCTTTTGAATCTGCCAGTAAGGCCAAGGCTACAGTTGAGCCTACCTCAACTGATGAACTGCTAGGAAAGAAGTCAAGGGAACCTCTGAGTATCAATCTTGCAACATTTGAGCATGCACTTCTGAGGGTCACCGCGGATGATATTCTGAAAGCCACAGAAAACTTCAGTAAGGTGCACATAATAGGTGATGGTGGATTTGGCACTGTCTACAAGGCAGCGCTCCCTGAAGGCCGGAGAGTCGCGATCAAGAGGCTCCATGGTGGCCATCAGTTCCAAGGTGACCGTGAGTTTCTAGCTGAGATGGAGACAATTGGAAAGGTGAAACATCCAAACCTCGTCCCTCTACTTGGCTACTGTGTTTGTGGCGATGAACGATTCCTGATCTACGAGTACATGGAGAATGGGAGCCTCGAGATGTGGCTGAGAAACCGAGCAGATGCACTTGAAGCTCTTGGATGGCCGGACCGTCTCAAGATCTGCCTCGGTTCAGCCCGTGGGCTCGCCTTCCTGCATCATGGCTTTGTGCCCCATATCATCCACCGGGACATGAAGTCGAGCAACATTCTACTGGATGAGAACTTCGAGCCGAGGGTCTCTGACTTCGGCCTTGCAAGGATCATCAGTGCCTGTGAGACCCATGTCAGCACTGACATTGCCGGTACATTTGGATACATTCCTCCGGAGTATGGCCTCACAATGAAGTCCACCACGAAAGGCGACGTCTACAGCTTCGGCGTCGTCATGCTGGAGCTCCTCACCGGACGGCCACCTACAGGCCAGGAGGAGGTGCAAGGGGGTGGAAACCTCGTCGGCTGGGTGCGGTGGATGATCGCCCGCGGTAAGCAGAACGAGCTGTTCGATCCATGCTTGCCGGTTTCAAGCGTGTGGCGGGAGCAGATGGCGCGCGTGCTCGCCATCGCCCGGGACTGCACCGCCGACGAGCCGTTCAAGAGGCCGACAATGCTGGAGGTGGTGAAGGGGCTCAAGATGACCCACGGCATGGAATGTGGACCTCTGGTGGTGACCGTCTCCAGGGACATGTAATGCTCTCTGCTTGATCTTCCTGAAACTAATGTAGTAATAATGTAGTCAGTAGGGAGTAGGCTAATGGTAGTTAGGAGTAACTCGTAGCTATAGAGTAACCGAGCTATCTGGAGGCTGTAATGAGGGAAACTAGAGTTACTCATGTTCAGGCTGTAGTTGGAACTAGTATTAAGACCTTTTATCTTGTACTATTGTCACTGGTGGTTCCTGTGGCAATGTGAGTGCTTAATGTGCTGTCGTTTGAATAAAAGTACTGCTTGCCTGTTTCTAAGTGTTAAAAAAAAAAAA]
[+] EMBL AB103395 [CATGGGCTTCTTGATCCTATCTCCAGGTTTTTAGGCTTTACGATGAGTGGTTTGCGTAACTTCTGCTTTTATTCTTGCTGATCAGAGAGCAGTTCCTGGTTTTTGTTATGATGGTGTTGTTTCTTTTGGGGGCTAAGACCAAGATAATAGTATTAGTATATCCTTGTGGAGTTGTTGGAGCTATAGTGGCAACTGCCAAACACAGCCCAACCAGCATTGCTTCGAGTCCTTCCACTAGATGTTGATTCAAGTAGGATAGGTTTGCTTGTTTCATGTTCTTGTACATTTGAGCTGACAATCGCATGAAAGCTGAGTGTTCCTGTTCTTTTCTAATTGTTCAGGATGCATTTCTGAGAGGGCGTAATGGTTCAGACTGCAGAAGGATGTGTATTGCACAGTTTTATCTGTCAGTCATCTATATCCTACTTGAAGTTACAAGGCTACATCTTATAAGATAATTGTTACAGTCCCAAAAAGAATAACGTGGAAATGGTATCCAATAGTTTCTGGCTTTTCATCCTGCTAGTGAGCTTCATCCCCATTTCTGCTTGGGCAGAATCACGTGATATAAGTACTCTGTTCACTCTGAGGGATTCAATCACCGAAGGAAAAGGCTTTCTCCGTAACTGGTTTGATTCGGAAACTCCCCCATGCAGCTGGTCAGGCATAACTTGCATAGGACATAATGTTGTGGCGATTGATTTGTCCTCTGTTCCACTCTATGCTCCGTTTCCATTATGCATTGGGGCATTCCAGTCACTTGTTCGGCTCAACTTCAGTGGATGTGGGTTTTCCGGAGAGCTTCCGGAAGCTTTGGGAAATTTGCAGAATCTCCAGTACCTAGACTTGAGCAATAACGAGCTTACTGGGCCAATACCTATCTCACTATATAACCTGAAGATGCTGAAGGAAATGGTGCTTGACTACAACTCCTTGTCAGGACAACTTAGTCCTGCTATTGCTCAGCTGCAGCACCTTACTAAGCTATCTATATCCATGAATTCCATCTCCGGAAGCCTTCCACCAGATCTGGGCAGCCTGAAGAACCTGGAGTTGTTGGACATTAAGATGAACACATTCAATGGATCTATACCAGCAACTTTTGGGAACCTGTCTTGTCTCTTGCACTTTGATGCTAGCCAGAATAACCTAACTGGATCAATATTCCCTGGAATAACCTCGTTGACAAACCTATTGACACTTGATCTATCATCAAACAGTTTTGAGGGAACAATTCCTAGGGAGATTGGTCAACTGGAAAATCTGGAATTACTGATTCTAGGAAAGAATGATCTCACTGGAAGGATTCCACAAGAGATTGGTAGTCTGAAGCAGCTTAAGTTACTTCATCTCGAGGAATGTCAGTTCACAGGCAAAATACCTTGGTCAATCAGTGGACTCAGCAGCTTGACAGAACTTGACATATCAGATAACAACTTTGACGCTGAGCTCCCATCATCCATGGGTGAGCTTGGCAATCTAACACAGCTGATTGCAAAGAATGCTGGGCTCAGTGGGAACATGCCAAAAGAACTTGGGAATTGCAAGAAGCTTACTGTTATAAACCTGTCATTCAATGCCCTTATTGGACCTATTCCTGAAGAATTTGCAGATTTAGAGGCTATTGTCTCATTTTTTGTGGAAGGAAATAAACTATCGGGTCGTGTCCCAGATTGGATTCAGAAATGGAAAAATGCAAGGTCCATCAGGTTGGGACAGAACAAATTCAGTGGACCTTTGCCAGTGCTGCCATTGCAGCATCTGCTAAGTTTCGCTGCAGAATCCAACCTTCTCTCAGGTTCTATACCTTCTCACATATGCCAAGCCAACTCCTTGCATTCACTCTTATTGCATCATAACAATCTGACTGGGACTATTGATGAGGCATTTAAAGGGTGCACGAACCTCACTGAATTGAACTTGTTAGACAACCATATTCATGGGGAGGTACCAGGATATTTAGCAGAATTACCCCTGGTTACTCTGGAGTTGTCACAAAACAAATTCGCAGGGATGTTACCTGCGGAGCTGTGGGAGTCAAAAACCCTTCTAGAGATATCTCTCAGTAACAATGAAATTACCGGCCCAATACCTGAGAGTATTGGTAAACTCTCTGTATTGCAAAGGTTGCATATAGACAATAACTTACTCGAAGGGCCTATCCCTCAGTCTGTTGGTGATCTAAGGAATCTGACCAATCTATCCCTGCGTGGCAATAGGTTATCTGGGATCATTCCACTAGCACTTTTCAACTGCAGAAAACTTGCCACGCTGGACTTGAGCTATAACAATCTGACTGGGAACATTCCAAGTGCCATATCTCACTTGACATTGCTTGATAGCTTGATTTTGTCTTCCAACCAGCTGTCTGGTTCTATCCCTGCTGAGATTTGCGTGGGATTTGAGAATGAGGCTCACCCTGACTCAGAGTTTCTTCAGCACCATGGTCTTCTTGATCTGTCATACAACCAATTGACTGGTCAGATCCCAACATCTATAAAGAACTGTGCAATGGTGATGGTGCTCAACCTCCAAGGCAATTTGCTGAATGGCACCATTCCTGTGGAGCTTGGCGAGCTAACAAATCTTACATCCATTAACTTGTCATTTAATGAATTTGTTGGACCAATGCTTCCATGGTCTGGACCTTTGGTTCAATTGCAAGGCCTTATTCTGTCCAATAACCACCTAGATGGCTCCATTCCTGCTAAGATAGGCCAAATCCTTCCCAAAATTGCAGTGCTAGACTTGTCAAGCAATGCACTCACTGGCACTCTACCACAGTCTTTGCTCTGCAACAATTACCTAAACCATCTGGATGTCAGCAACAACCACCTATCTGGGCATATCCAGTTCTCTTGCCCCGATGGCAAAGAATACTCAAGTACACTGCTCTTCTTCAATTCAAGCAGCAACCATTTCTCAGGGAGCCTAGATGAGTCTATCTCGAACTTCACACAATTGTCTACTCTTGATATCCACAACAATAGCCTCACTGGAAGGTTGCCTTCAGCACTTTCTGATCTCAGTTCTTTGAATTATCTTGATCTGTCGAGCAACAATCTCTATGGTGCCATACCCTGTGGAATCTGCAATATATTTGGCCTCTCATTTGCCAACTTCTCAGGTAACTATATTGACATGTACAGCTTGGCAGATTGTGCTGCAGGAGGCATTTGTTCTACTAATGGTACTGATCATAAAGCATTGCATCCATATCATCGGGTTCGAAGGGCAATTACCATCTGTGCCTTTACATTCGTCATCATCATTGTTTTAGTGCTTCTGGCTGTTTATCTGAGACGGAAGCTGGTTAGAAGCAGGCCTTTGGCTTTTGAATCTGCCAGTAAGGCCAAGGCTACAGTTGAGCCTACCTCAACTGATGAACTGCTAGGAAAGAAGTCAAGGGAACCTCTGAGTATCAATCTTGCAACATTTGAGCATGCACTTCTGAGGGTCACCGCGGATGATATTCTGAAAGCCACAGAAAACTTCAGTAAGGTGCACATAATAGGTGATGGTGGATTTGGCACTGTCTACAAGGCAGCGCTCCCTGAAGGCCGGAGAGTCGCGATCAAGAGGCTCCATGGTGGCCATCAGTTCCAAGGTGACCGTGAGTTTCTAGCTGAGATGGAGACAATTGGAAAGGTGAAACATCCAAACCTCGTCCCTCTACTTGGCTACTGTGTTTGTGGCGATGAACGATTCCTGATCTACGAGTACATGGAGAATGGGAGCCTCGAGATGTGGCTGAGAAACCGAGCAGATGCACTTGAAGCTCTTGGATGGCCGGACCGTCTCAAGATCTGCCTCGGTTCAGCCCGTGGGCTCGCCTTCCTGCATCATGGCTTTGTGCCCCATATCATCCACCGGGACATGAAGTCGAGCAACATTCTACTGGATGAGAACTTCGAGCCGAGGGTCTCTGACTTCGGCCTTGCAAGGATCATCAGTGCCTGTGAGACCCATGTCAGCACTGACATTGCCGGTACATTTGGATACATTCCTCCGGAGTATGGCCTCACAATGAAGTCCACCACGAAAGGCGACGTCTACAGCTTCGGCGTCGTCATGCTGGAGCTCCTCACCGGACGGCCACCTACAGGCCAGGAGGAGGTGCAAGGGGGTGGAAACCTCGTCGGCTGGGTGCGGTGGATGATCGCCCGCGGTAAGCAGAACGAGCTGTTCGATCCATGCTTGCCGGTTTCAAGCGTGTGGCGGGAGCAGATGGCGCGCGTGCTCGCCATCGCCCGGGACTGCACCGCCGACGAGCCGTTCAAGAGGCCGACAATGCTGGAGGTGGTGAAGGGGCTCAAGATGACCCACGGCATGGAATGTGGACCTCTGGTGGTGACCGTCTCCAGGGACATGTAATGCTCTCTGCTTGATCTTCCTGAAACTAATGTAGTAATAATGTAGTCAGTAGGGAGTAGGCTAATGGTAGTTAGGAGTAACTCGTAGCTATAGAGTAACCGAGCTATCTGGAGGCTGTAATGAGGGAAACTAGAGTTACTCATGTTCAGGCTGTAGTTGGAACTAGTATTAAGACCTTTTATCTTGTACTATTGTCACTGGTGGTTCCTGTGGCAATGTGAGTGCTTAATGTGCTGTCGTTTGAATAAAAGTACTGCTTGCCTGTTTCTAAGTGTTAAAAAAAAAAAA]
[+] EMBL AK120933 [ TATTGATGAGGCATTTAAAGGGTGCACGAACCTCACTGAATTGAACTTGTTAGACAACCATATTCATGGGGAGGTACCAGGATATTTAGCAGAATTACCCCTGGTTACTCTGGAGTTGTCACAAAACAAATTCGCAGGGATGTTACCTGCGGAGCTGTGGGAGTCAAAAACCCTTCTAGAGATATCTCTCAGTAACAATGAAATTACCGGCCCAATACCTGAGAGTATTGGTAAACTCTCTGTATTGCAAAGGTTGCATATAGACAATAACTTACTCGAAGGGCCTATCCCTCAGTCTGTTGGTGATCTAAGGAATCTGACCAATCTATCCCTGCGTGGCAATAGGTTATCTGGGATCATTCCACTAGCACTTTTCAACTGCAGAAAACTTGCCACGCTGGACTTGAGCTATAACAATCTGACTGGGAACATTCCAAGTGCCATATCTCACTTGACATTGCTTGATAGCTTGATTTTGTCTTCCAACCAGCTGTCTGGTTCTATCCCTGCTGAGATTTGCGTGGGATTTGAGAATGAGGCTCACCCTGACTCAGAGTTTCTTCAGCACCATGGTCTTCTTGATCTGTCATACAACCAATTGACTGGTCAGATCCCAACATCTATAAAGAACTGTGCAATGGTGATGGTGCTCAACCTCCAAGGCAATTTGCTGAATGGCACCATTCCTGTGGAGCTTGGCGAGCTAACAAATCTTACATCCATTAACTTGTCATTTAATGAATTTGTTGGACCAATGCTTCCATGGTCTGGACCTTTGGTTCAATTGCAAGGCCTTATTCTGTCCAATAACCACCTAGATGGCTCCATTCCTGCTAAGATAGGCCAAATCCTTCCCAAAATTGCAGTGCTAGACTTGTCAAGCAATGCACTCACTGGCACTCTACCACAGTCTTTGCTCTGCAACAATTACCTAAACCATCTGGATGTCAGCAACAACCACCTATCTGGGCATATCCAGTTCTCTTGCCCCGATGGCAAAGAATACTCAAGTACACTGCTCTTCTTCAATTCAAGCAGCAACCATTTCTCAGGGAGCCTAGATGAGTCTATCTCGAACTTCACACAATTGTCTACTCTTGATATCCACAACAATAGCCTCACTGGAAGGTTGCCTTCAGCACTTTCTGATCTCAGTTCTTTGAATTATCTTGATCTGTCGAGCAACAATCTCTATGGTGCCATACCCTGTGGAATCTGCAATATATTTGGCCTCTCATTTGCCAACTTCTCAGGTAACTATATTGACATGTACAGCTTGGCAGATTGTGCTGCAGGAGGCATTTGTTCTACTAATGGTACTGATCATAAAGCATTGCATCCATATCATCGGGTTCGAAGGGCAATTACCATCTGTGCCTTTACATTCGTCATCATCATTGTTTTAGTGCTTCTGGCTGTTTATCTGAGACGGAAGCTGGTTAGAAGCAGGCCTTTGGCTTTTGAATCTGCCAGTAAGGCCAAGGCTACAGTTGAGCCTACCTCAACTGATGAACTGCTAGGAAAGAAGTCAAGGGAACCTCTGAGTATCAATCTTGCAACATTTGAGCATGCACTTCTGAGGGTCACCGCGGATGATATTCTGAAAGCCACAGAAAACTTCAGTAAGGTGCACATAATAGGTGATGGTGGATTTGGCACTGTCTACAAGGCAGCGCTCCCTGAAGGCCGGAGAGTCGCGATCAAGAGGCTCCATGGTGGCCATCAGTTCCAAGGTGACCGTGAGTTTCTAGCTGAGATGGAGACAATTGGAAAGGTGAAACATCCAAACCTCGTCCCTCTACTTGGCTACTGTGTTTGTGGCGATGAACGATTCCTGATCTACGAGTACATGGAGAATGGGAGCCTCGAGATGTGGCTGAGAAACCGAGCAGATGCACTTGAAGCTCTTGGATGGCCGGACCGTCTCAAGATCTGCCTCGGTTCAGCCCGTGGGCTCGCCTTCCTGCATCATGGCTTTGTGCCCCATATCATCCACCGGGACATGAAGTCGAGCAACATTCTACTGGATGAGAACTTCGAGCCGAGGGTCTCTGACTTCGGCCTTGCAAGGATCATCAGTGCCTGTGAGACCCATGTCAGCACTGACATTGCCGGTACATTTGGATACATTCCTCCGGAGTATGGCCTCACAATGAAGTCCACCACGAAAGGCGACGTCTACAGCTTCGGCGTCGTCATGCTGGAGCTCCTCACCGGACGGCCACCTACAGGCCAGGAGGAGGTGCAAGGGGGTGGAAACCTCGTCGGCTGGGTGCGGTGGATGATCGCCCGCGGTAAGCAGAACGAGCTGTTCGATCCATGCTTGCCGGTTTCAAGCGTGTGGCGGGAGCAGATGGCGCGCGTGCTCGCCATCGCCCGGGACTGCACCGCCGACGAGCCGTTCAAGAGGCCGACAATGCTGGAGGTGGTGAGGGGGCTCAAGATGACCCACGGCATGGAATGTGGACCTCTGGTGGTGACCGTCTCCAGGGACATGTAATGCTCTCTGCTTGATCTTCCTGAAACTAATGTAGTAATAATGTAGTCAGTAGGGAGTAGGCTAATGGTAGTTAGGAGTAACTCGTAGCTATAGAGTAACCGAGCTATCTGGAGGCTGTAATGAGGGAAACTAGAGTTACTCATGTTCAGGCTGTAGTTGGAACTAGTATTAAGACCTTTTATCTTGTACTATTGTCACTGGTGGTTCCTGTGGCAATGTGAGTG ]
consensusID : consensus_4103#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 693 fasta sequence
[TGTGCCTCTGGGTAGTGTCTTCCTGTGCCCGTCTTTATGATGTTTGGTTGATTCTGTTTCATCCGATNTGATATAAAGCTGTACTCCTAGCACGTACTGTACTGTAGTGCCTTTTCCTACCTTTTCTTGTGCTTGTGATGGATCGTGGATGGATGTTTCATGGGCTTCTTGATCCTATCTCCAGGTTTTTAGGCTNTACGATGAGTGGTTTGCGTAACTTCTGCTTTTATTCTTGCTGATCAGAGAGCAGTTCCTGGTTTTTGTTATGATGGTGTTGTTTCTTTTGGGGGCTAAGACCAAGATAATAGTATTAGTATATCCTTGTGGAGTTGTTGGAGCTATAGTGGCAACTGCCAAACACAGCCCAACCAGCATTGCTTCGAGTCCTTCCACTAGATGTTGATTCAAGTAGGATAGGTTTGCTTGTTTCATGTTCTTGTACATTTGAGCTGACAATCGCATGAAAGCTGAGTGTTCCTGTTCTTTTCTAATTGTTCAGGATGCATTTTTGAGAGGGCGTAATGGTTCAGACTGCAGAAGGTAATGAAATTGAAGTTCTTCCTTTGTGCTGAATGTTTGTAGAGCTTACAGTAGTGCACCTGGCATGAATTACATGAATCTTGCATCACCTCTTGCTCATTTGAGAGAAGTGGTATCAACTCTAACGAATTCTTTGCGTCAAAAAAAAAAAAA]
[-] EMBL CA760725 [TGTGCCTCTGGGTAGTGTCTTCCTGTGCCCGTCTTTATGATGTTTGGTTGATTCTGTTTCATCCGATNTGATATAAAGCTGTACTCCTAGCACGTACTGTACTGTAGTGCCTTTTCCTACCTTTTCTTGTGCTTGTGATGGATCGTGGATGGATGTTTCATGGGCTTCTTGATCCTATCTCCAGGTTTTTAGGCTNTACGATGAGTGGTTTGCGTAACTTCTGCTTTTATTCTTGCTGATCAGAGAGCAGTTCCTGGTTTTTGTTATGATGGTGTTGTTTCTTTTGGGGGCTAAGACCAAGATAATAGTATTAGTATATCCTTGTGGAGTTGTTGGAGCTATAGTGGCAACTGCCAAACACAGCCCAACCAGCATTGCTTCGAGTCCTTCCACTAGATGTTGATTCAAGTAGGATAGGTTTGCTTGTTTCATGTTCTTGTACATTTGAGCTGACAATCGCATGAAAGCTGAGTGTTCCTGTTCTTTTCTAATTGTTCAGGATGCATTTTTGAGAGGGCGTAATGGTTCAGACTGCAGAAGGTAATGAAATTGAAGTTCTTCCTTTGTGCTGAATGTTTGTAGAGCTTACAGTAGTGCACCTGGCATGAATTACATGAATCTTGCATCACCTCTTGCTCATTTGAGAGAAGTGGTATCAACTCTAACGAATTCTTTGCGTCAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4103#0 ------------------------------------------------------------
consensus_4103#1 TGTGCCTCTGGGTAGTGTCTTCCTGTGCCCGTCTTTATGATGTTTGGTTGATTCTGTTTC 60
consensus_4103#0 ------------------------------------------------------------
consensus_4103#1 ATCCGATNTGATATAAAGCTGTACTCCTAGCACGTACTGTACTGTAGTGCCTTTTCCTAC 120
consensus_4103#0 --------------------------------------CATGGGCTTCTTGATCCTATCT 22
consensus_4103#1 CTTTTCTTGTGCTTGTGATGGATCGTGGATGGATGTTTCATGGGCTTCTTGATCCTATCT 180
**********************
consensus_4103#0 CCAGGTTTTTAGGCTTTACGATGAGTGGTTTGCGTAACTTCTGCTTTTATTCTTGCTGAT 82
consensus_4103#1 CCAGGTTTTTAGGCTNTACGATGAGTGGTTTGCGTAACTTCTGCTTTTATTCTTGCTGAT 240
*************** ********************************************
consensus_4103#0 CAGAGAGCAGTTCCTGGTTTTTGTTATGATGGTGTTGTTTCTTTTGGGGGCTAAGACCAA 142
consensus_4103#1 CAGAGAGCAGTTCCTGGTTTTTGTTATGATGGTGTTGTTTCTTTTGGGGGCTAAGACCAA 300
************************************************************
consensus_4103#0 GATAATAGTATTAGTATATCCTTGTGGAGTTGTTGGAGCTATAGTGGCAACTGCCAAACA 202
consensus_4103#1 GATAATAGTATTAGTATATCCTTGTGGAGTTGTTGGAGCTATAGTGGCAACTGCCAAACA 360
************************************************************
consensus_4103#0 CAGCCCAACCAGCATTGCTTCGAGTCCTTCCACTAGATGTTGATTCAAGTAGGATAGGTT 262
consensus_4103#1 CAGCCCAACCAGCATTGCTTCGAGTCCTTCCACTAGATGTTGATTCAAGTAGGATAGGTT 420
************************************************************
consensus_4103#0 TGCTTGTTTCATGTTCTTGTACATTTGAGCTGACAATCGCATGAAAGCTGAGTGTTCCTG 322
consensus_4103#1 TGCTTGTTTCATGTTCTTGTACATTTGAGCTGACAATCGCATGAAAGCTGAGTGTTCCTG 480
************************************************************
consensus_4103#0 TTCTTTTCTAATTGTTCAGGATGCATTTCTGAGAGGGCGTAATGGTTCAGACTGCAGAAG 382
consensus_4103#1 TTCTTTTCTAATTGTTCAGGATGCATTTTTGAGAGGGCGTAATGGTTCAGACTGCAGAAG 540
**************************** *******************************
consensus_4103#0 GATGTGTA-TTGCACAGTTTTATCTGTCAGTCATCTATATCCTACTTGAAGTTACAAGGC 441
consensus_4103#1 GTAATGAAATTGAAGTTCTTCCTTTGTGCTGAATGTTTGTAGAGCTTACAGTAGTGCACC 600
* ** * *** * ** * *** ** * * * *** *** *
consensus_4103#0 TACATCTTATAAGATAATTGTTACAGT-CCCAAAAAGAATAACGTGGAAATGGTATCCAA 500
consensus_4103#1 TGGCATGAATTACATGAATCTTGCATCACCTCTTGCTCATTTGAGAGAAGTGGTATC-AA 659
* ** * ** * * ** ** ** ** *** ******* **
consensus_4103#0 TAGTTTCTGGCTTTTCATCCTGCTAGTGAGCTTCATCCCCATTTCTGCTTGGGCAGAATC 560
consensus_4103#1 CTCTAACGAATTCTTTGCGTCAAAAAAAAAAAAA-------------------------- 693
* * * ** * *
consensus_4103#0 ACGTGATATAAGTACTCTGTTCACTCTGAGGGATTCAATCACCGAAGGAAAAGGCTTTCT 620
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CCGTAACTGGTTTGATTCGGAAACTCCCCCATGCAGCTGGTCAGGCATAACTTGCATAGG 680
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 ACATAATGTTGTGGCGATTGATTTGTCCTCTGTTCCACTCTATGCTCCGTTTCCATTATG 740
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CATTGGGGCATTCCAGTCACTTGTTCGGCTCAACTTCAGTGGATGTGGGTTTTCCGGAGA 800
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 GCTTCCGGAAGCTTTGGGAAATTTGCAGAATCTCCAGTACCTAGACTTGAGCAATAACGA 860
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 GCTTACTGGGCCAATACCTATCTCACTATATAACCTGAAGATGCTGAAGGAAATGGTGCT 920
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TGACTACAACTCCTTGTCAGGACAACTTAGTCCTGCTATTGCTCAGCTGCAGCACCTTAC 980
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TAAGCTATCTATATCCATGAATTCCATCTCCGGAAGCCTTCCACCAGATCTGGGCAGCCT 1040
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 GAAGAACCTGGAGTTGTTGGACATTAAGATGAACACATTCAATGGATCTATACCAGCAAC 1100
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TTTTGGGAACCTGTCTTGTCTCTTGCACTTTGATGCTAGCCAGAATAACCTAACTGGATC 1160
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 AATATTCCCTGGAATAACCTCGTTGACAAACCTATTGACACTTGATCTATCATCAAACAG 1220
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TTTTGAGGGAACAATTCCTAGGGAGATTGGTCAACTGGAAAATCTGGAATTACTGATTCT 1280
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 AGGAAAGAATGATCTCACTGGAAGGATTCCACAAGAGATTGGTAGTCTGAAGCAGCTTAA 1340
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 GTTACTTCATCTCGAGGAATGTCAGTTCACAGGCAAAATACCTTGGTCAATCAGTGGACT 1400
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CAGCAGCTTGACAGAACTTGACATATCAGATAACAACTTTGACGCTGAGCTCCCATCATC 1460
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CATGGGTGAGCTTGGCAATCTAACACAGCTGATTGCAAAGAATGCTGGGCTCAGTGGGAA 1520
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CATGCCAAAAGAACTTGGGAATTGCAAGAAGCTTACTGTTATAAACCTGTCATTCAATGC 1580
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CCTTATTGGACCTATTCCTGAAGAATTTGCAGATTTAGAGGCTATTGTCTCATTTTTTGT 1640
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 GGAAGGAAATAAACTATCGGGTCGTGTCCCAGATTGGATTCAGAAATGGAAAAATGCAAG 1700
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 GTCCATCAGGTTGGGACAGAACAAATTCAGTGGACCTTTGCCAGTGCTGCCATTGCAGCA 1760
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TCTGCTAAGTTTCGCTGCAGAATCCAACCTTCTCTCAGGTTCTATACCTTCTCACATATG 1820
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CCAAGCCAACTCCTTGCATTCACTCTTATTGCATCATAACAATCTGACTGGGACTATTGA 1880
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TGAGGCATTTAAAGGGTGCACGAACCTCACTGAATTGAACTTGTTAGACAACCATATTCA 1940
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TGGGGAGGTACCAGGATATTTAGCAGAATTACCCCTGGTTACTCTGGAGTTGTCACAAAA 2000
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CAAATTCGCAGGGATGTTACCTGCGGAGCTGTGGGAGTCAAAAACCCTTCTAGAGATATC 2060
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TCTCAGTAACAATGAAATTACCGGCCCAATACCTGAGAGTATTGGTAAACTCTCTGTATT 2120
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 GCAAAGGTTGCATATAGACAATAACTTACTCGAAGGGCCTATCCCTCAGTCTGTTGGTGA 2180
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TCTAAGGAATCTGACCAATCTATCCCTGCGTGGCAATAGGTTATCTGGGATCATTCCACT 2240
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 AGCACTTTTCAACTGCAGAAAACTTGCCACGCTGGACTTGAGCTATAACAATCTGACTGG 2300
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 GAACATTCCAAGTGCCATATCTCACTTGACATTGCTTGATAGCTTGATTTTGTCTTCCAA 2360
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CCAGCTGTCTGGTTCTATCCCTGCTGAGATTTGCGTGGGATTTGAGAATGAGGCTCACCC 2420
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TGACTCAGAGTTTCTTCAGCACCATGGTCTTCTTGATCTGTCATACAACCAATTGACTGG 2480
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TCAGATCCCAACATCTATAAAGAACTGTGCAATGGTGATGGTGCTCAACCTCCAAGGCAA 2540
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TTTGCTGAATGGCACCATTCCTGTGGAGCTTGGCGAGCTAACAAATCTTACATCCATTAA 2600
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CTTGTCATTTAATGAATTTGTTGGACCAATGCTTCCATGGTCTGGACCTTTGGTTCAATT 2660
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 GCAAGGCCTTATTCTGTCCAATAACCACCTAGATGGCTCCATTCCTGCTAAGATAGGCCA 2720
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 AATCCTTCCCAAAATTGCAGTGCTAGACTTGTCAAGCAATGCACTCACTGGCACTCTACC 2780
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 ACAGTCTTTGCTCTGCAACAATTACCTAAACCATCTGGATGTCAGCAACAACCACCTATC 2840
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TGGGCATATCCAGTTCTCTTGCCCCGATGGCAAAGAATACTCAAGTACACTGCTCTTCTT 2900
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CAATTCAAGCAGCAACCATTTCTCAGGGAGCCTAGATGAGTCTATCTCGAACTTCACACA 2960
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 ATTGTCTACTCTTGATATCCACAACAATAGCCTCACTGGAAGGTTGCCTTCAGCACTTTC 3020
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TGATCTCAGTTCTTTGAATTATCTTGATCTGTCGAGCAACAATCTCTATGGTGCCATACC 3080
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CTGTGGAATCTGCAATATATTTGGCCTCTCATTTGCCAACTTCTCAGGTAACTATATTGA 3140
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CATGTACAGCTTGGCAGATTGTGCTGCAGGAGGCATTTGTTCTACTAATGGTACTGATCA 3200
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TAAAGCATTGCATCCATATCATCGGGTTCGAAGGGCAATTACCATCTGTGCCTTTACATT 3260
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CGTCATCATCATTGTTTTAGTGCTTCTGGCTGTTTATCTGAGACGGAAGCTGGTTAGAAG 3320
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CAGGCCTTTGGCTTTTGAATCTGCCAGTAAGGCCAAGGCTACAGTTGAGCCTACCTCAAC 3380
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TGATGAACTGCTAGGAAAGAAGTCAAGGGAACCTCTGAGTATCAATCTTGCAACATTTGA 3440
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 GCATGCACTTCTGAGGGTCACCGCGGATGATATTCTGAAAGCCACAGAAAACTTCAGTAA 3500
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 GGTGCACATAATAGGTGATGGTGGATTTGGCACTGTCTACAAGGCAGCGCTCCCTGAAGG 3560
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CCGGAGAGTCGCGATCAAGAGGCTCCATGGTGGCCATCAGTTCCAAGGTGACCGTGAGTT 3620
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TCTAGCTGAGATGGAGACAATTGGAAAGGTGAAACATCCAAACCTCGTCCCTCTACTTGG 3680
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CTACTGTGTTTGTGGCGATGAACGATTCCTGATCTACGAGTACATGGAGAATGGGAGCCT 3740
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CGAGATGTGGCTGAGAAACCGAGCAGATGCACTTGAAGCTCTTGGATGGCCGGACCGTCT 3800
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CAAGATCTGCCTCGGTTCAGCCCGTGGGCTCGCCTTCCTGCATCATGGCTTTGTGCCCCA 3860
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TATCATCCACCGGGACATGAAGTCGAGCAACATTCTACTGGATGAGAACTTCGAGCCGAG 3920
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 GGTCTCTGACTTCGGCCTTGCAAGGATCATCAGTGCCTGTGAGACCCATGTCAGCACTGA 3980
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CATTGCCGGTACATTTGGATACATTCCTCCGGAGTATGGCCTCACAATGAAGTCCACCAC 4040
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 GAAAGGCGACGTCTACAGCTTCGGCGTCGTCATGCTGGAGCTCCTCACCGGACGGCCACC 4100
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TACAGGCCAGGAGGAGGTGCAAGGGGGTGGAAACCTCGTCGGCTGGGTGCGGTGGATGAT 4160
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CGCCCGCGGTAAGCAGAACGAGCTGTTCGATCCATGCTTGCCGGTTTCAAGCGTGTGGCG 4220
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 GGAGCAGATGGCGCGCGTGCTCGCCATCGCCCGGGACTGCACCGCCGACGAGCCGTTCAA 4280
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 GAGGCCGACAATGCTGGAGGTGGTGAAGGGGCTCAAGATGACCCACGGCATGGAATGTGG 4340
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 ACCTCTGGTGGTGACCGTCTCCAGGGACATGTAATGCTCTCTGCTTGATCTTCCTGAAAC 4400
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TAATGTAGTAATAATGTAGTCAGTAGGGAGTAGGCTAATGGTAGTTAGGAGTAACTCGTA 4460
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 GCTATAGAGTAACCGAGCTATCTGGAGGCTGTAATGAGGGAAACTAGAGTTACTCATGTT 4520
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CAGGCTGTAGTTGGAACTAGTATTAAGACCTTTTATCTTGTACTATTGTCACTGGTGGTT 4580
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 CCTGTGGCAATGTGAGTGCTTAATGTGCTGTCGTTTGAATAAAAGTACTGCTTGCCTGTT 4640
consensus_4103#1 ------------------------------------------------------------
consensus_4103#0 TCTAAGTGTTAAAAAAAAAAAA 4662
consensus_4103#1 ----------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||