cluster # 4120

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Oryza sativa
cluster # 4120 cluster # 4120 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4120#0 length = 562 sequences # 3

consensusID : consensus_4120#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 562
fasta sequence

                              [AAATCTCTTGGACTGGG-AGTAGAATTTGACAGCGAGGCTGAGGCAATNAAGNCAAGGTCCAGANCCACCCAACCAAAGCAAGGTCAGANCCATGGCGGAATTTGAGGAAAGTGGAGATTGGTGGCGTTGGTTCCTTTGAGAGGCATACAAAGGGCTTTGGATCCAAGATGATGGCGAGGATGGGGTTCGTTGAGGGCTCTGGCCTGGGGAAGGATGGCCAGGGCATCGTCAA-CCCCTTGACTGCGGTGAGGCGACCCAAGTCAATGGGGCTGGGAGCTAAGAATAAGTATTAATACCATATGTGCCTTCTATCTATCTATGTTATCTATGTTATGTACCTTTTACAGCCGCTTGAGTTTGATAACCTAGTTGTATATATGCTAGGAGAGCATAACCCCGTTGGCCGCGGCAAACAGCACGCGAAATCGTGGGTTCCGATGCCCCTGGCTGTAGGCAGTAGGTTCTATCTTGTTTACATTGCGGCATTTCACATTTTTCATTCCCTGTTGTTTTGTTCAATTCTCTGGAGGAAAGTTATTTATTTCCATGGTACGTCTAAAAA]

[+] EMBL AU101181             [AAATCTCTTGGACTGGG AGTAGAATTTGACAGCGAGGCTGAGGCAATNAAGNCAAGGTCCAGANCCACCCAACCAAAGCAAGGTCAGANCCATGGCGGAATTTGAGGAAAGTGGAGATTGGTGGCGTTGGTTCCTTTGAGAGGCATACAAAGGGCTTTGGATCCAAGATGATGGCGAGGATGGGGTTCGTTGAGGGCTCTGGCCTGGGGAAGGATGGCCAGGGCATCGTNAA CCCCTTGACTGCGGTGAGGCGACCCAAGTCAATGGGGCTGGGAGCTAAGAATAAGTATTAATACCATATGTGCCTTCTATCTATCTATGTTATCTATGTTATGTACCTTTTACAGCCGCTTGAGTTTGATAACCTAGTTGTATATATGCTAGGAGAGCATAACCCCGTTGGCCGCGGCAAACAGCACGCGAAATCGTGGGTTCCGATGCCCCTGGCTGTAGGCAGTAGGTTCTATCTTGTTTACATTGCGGCATTTCACATTTTTCATTCCCTGTTGTTTTGTTCAATTCTCTGGAGGAAAGTTATTTATTTCCATGGTACGTCTAAAAA]
[-] EMBL CB636690             [           ACTGGGAAGAAGAATTTGACAGCGAGGTTGAGGCAATCAAGGCAAGGT CAGAACCA CCAACCAAAGCAAGGTCAGAACCATGGCGGAATTTGAGGAAAGTGGAGATTGGTGGCGTTGGTTCCTTTGAGAGGCATACAAAGGGCTTTGGATCCAAGATGATGGCGAGGATGGGGTTCGTTGAGGGCTCTGGCCTGGGGAAGGATGGCCAGGGCATCGTCAA CCCCTTGACTGCGGTGAGGCGACCCAAGTCAATGGGGCTGGGAGCTAAGAATAAGTATTAATACCATATGTGCCTTCTATCTATCTATGTTATCTATGTTATGTACCTTTTACAGCCGCTTGAGTTTGATAACCTAGTTGTATATATGCTAGGAGAGCATAACCCAAAAGGCCGCGGCAAACAGCACGCGAAATC                                                                                                                                       ]
[-] EMBL CF311363             [                                                                                            ATGGCGGAATTTGAGGAAAGTGGAGATTGGTGGCGTTGGTTCCTTTGAGAGGCATACAAAGGGCTTTGGATCCAAGATGATGGCGAGGATGGGGTTCGTTGAGGGCTCTGGCCTGGGGAAGGATGGCCAGGGCATCGTCAACCCCCTTGACTGCGGTGAGGCGACCCAAGTCAATGGGGCTGGGAGCTAAGAATAAGTATTAATACCATATGTGCCTTCTATCTATCTATGTTATCTATGTTATGTACCTTTTACAGCCGCTTGAGTTTGATAACCTAGTTGTATATATGCTAGGAGAGCATAACCCCGTTGGCCGCGGCAAACAGCACGCGAAATCGTGGGTTCCGATGCCCCTGGCTGTAGGCAGTAGGTTCTATCTTGTTTACATTGCGGCATTTCACATTTTTCATTCCCTGTTGTTTTGTTCAATTCTCTGGAGGAAAGTTATTTAaaaaaa               ]




>consensus_4120#0
AAATCTCTTGGACTGGGAGTAGAATTTGACAGCGAGGCTGAGGCAATNAAGNCAAGGTCC
AGANCCACCCAACCAAAGCAAGGTCAGANCCATGGCGGAATTTGAGGAAAGTGGAGATTG
GTGGCGTTGGTTCCTTTGAGAGGCATACAAAGGGCTTTGGATCCAAGATGATGGCGAGGA
TGGGGTTCGTTGAGGGCTCTGGCCTGGGGAAGGATGGCCAGGGCATCGTCAACCCCTTGA
CTGCGGTGAGGCGACCCAAGTCAATGGGGCTGGGAGCTAAGAATAAGTATTAATACCATA
TGTGCCTTCTATCTATCTATGTTATCTATGTTATGTACCTTTTACAGCCGCTTGAGTTTG
ATAACCTAGTTGTATATATGCTAGGAGAGCATAACCCCGTTGGCCGCGGCAAACAGCACG
CGAAATCGTGGGTTCCGATGCCCCTGGCTGTAGGCAGTAGGTTCTATCTTGTTTACATTG
CGGCATTTCACATTTTTCATTCCCTGTTGTTTTGTTCAATTCTCTGGAGGAAAGTTATTT
ATTTCCATGGTACGTCTAAAAA

clustalw multiple alignements is not computed in this case