These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4152#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 5142 fasta sequence [AAAAGGAGGAGAGGATTGTAAGTTTGCAACCAGCAGAGCTTTGCCCCGGGGCGTCGGCACGCACTGCCACCTCGCCCTCGAGGCCTCGACGGCGCCACAGTGCCACACCCATTCTCTGTTGATCCCTAGCTGTAGTTGTAGCTGGCAGATGGACAAGGCGGCGGTTGTTCCACTTCCAATCACCGGAGGAGTCAACGACGATCGTACTGCTGCGCTGCAGCAGTGGGCTTCCACCGTCGGCTTCGGAGGCGAGGTGGGGCGCCTCGTCGAAGCCCACCGACGCCTCGACTCGGTGCTCGCGGAGACGCAGGGGAAGGAGATCCGGAACAAGGAGCTCCAGCGGCGCCTCAGGGAGGCCTCGCATGATGCTGCCCGCGCCCGTGACCTCCTCGGCGAGCTCGAGTACTACCGCATCCGCGAGGAGGTGGAGCGCGACGACCACGATAAGCTATTGCATGACAATGCAAATGGAAATTTGCTTCTCTCCATGCCTCAAAGGGATGTTGAGTTCTTTAACAATGATGCAGCAAAAGATGACAAAGACACCACAGAAAGTTCTCTTAGCAACACAGATTCATCTGCATCTGCTCTTCAGGTTACTACGTACATTGCTAGTAGCAGTAGTCCAGTACCCTATCTGGAGACTCTTAACAAGTGCATCTCGAATGAGATAAGTAAATACACTGAAAAATGCTACAGGATAGCCAAACAGGTGAGTGAAGCTCTTGAGCTTGAAAGTCTGGATTACCTTTACGCGCACAAATACCAGAGAACAAGAACAGATCATCGGGAGACATCACCATGCCAAAGTGAACCCAAAGTTCATGGGAGGGACCAACAGCGTGACTTGATAATAAGCAAGTTAACAAGTGAGGAATGTGCTAGGAAGAAACTCTCTATCCTTGCCATCATCGGTGATGGAGGTATTGGGAAAACTACTCTGGCTAAGCTAGTCTTCAACAACTCAACAGTGTCAAAGCATTTTGACGTTCTGTTATGGGTTTATGTATCTGTTCACTTTGATCAAAATAAGATTATGCAGGAAATGTTGGACTCCTTTTGCGGGGATGAGCATGATGAAATCAAGAAATCGAAGGAGCTTCAACTCCAAGACAAACTTGACTACTTATTGAAGTCAAAACGAGTGCTACTTGTTATGGATGACATGTGGGAGGATAGCACAAAGGAAAAATGGGATGAGCTGTTAAATCCATTGCTTAAAAACGATGTTATGGGGAACAGTGTTCTTGTCACAACTCGTAAACCATCTGTGGCAACAATGATAGAAGCAGCAGATCACATCAACCTGGATGGTTTGAAAAAAGATGACTTTTGGTGTTTGTTCAAGGAATGTGTATTTGGACATGAGAACTATAAAGGAGAACCAAGACTGGAAAAAATTGGGCAGCAGATAGTTGACAAGTTAAAGGGCAATCCTTTAGCAGCAAAGACTGTAAGCAAAGTATTGAGAAGGAGCTTTGACGTTGATTACTGGAGGAGAATTCTGCATACCGGTGAATGGAAGTACAAAAATGATGAGAATGATATCATGCCGGCCTTGATGATCAGCTACAAATATCTTCCAGCTCACCTTCAAAGTTGTTTCTCGTACTGTGCTGTGTTCCCAAAGTATCATAGGTATGAGAAAGAGCGTCTGATCGATATGTGGATAGCGCAAGATTTGCTATGTTCCGCTGATATTCACACACGACCTGAGGACATTGGAAATGAATACTTTGATGATCTACTTGATTGGGGATTTTTCGAAAAACAGTTTGAGCACTCAACCTTACTCATCATGCATGATCTAATTCATGATCTGGCACAGAAGGTTTCATCTGACGAAAGCTTTACCATAGAGGGCAATGAGCCTAGGAATGCACCGCCATGTGTTCGTCATGTCAGTGTAATAACAGAGTGGGAGTACAAAACAAAATTGAATGGCACTGTGTATCCTAATGATTCTTTCCTCCAAGAGTTCTCTAATTCCTTCCGTGAGTTGCAACAAAGGAGCTTAAGCACATTGATGCTGTTTGGGCCACATGACTTGGATTTTGCAGACACGTTTCGGCAAGAACTCAATGAGGTAAGGTCAATCCGTGTGTTGAAACTGGAGATGGTCTTCTTTGACTTGGATTCATTGATAGGCAACATCTCAGCATTTGTCAATCTTCGCTATCTAGAACTGGGCTGCTTCTACAAGGGCCCCAGGCTGGAGCTACCAGAAGCTATATGCAGGCTGTATCACCTTAAAGTCCTGGATATAAAGAAGAACTGGGGTCCTAGCACATCTTTGCCAAGAGAAATGAGCAAGCTTGTTAACTTGCGGCATTTTATTGCTGAAAAGGAGTTACATGCAAAAATAGCTGGCATCGGAAAGATGGTTTCCCTGCAGGAGCTAAAGGCATTTGATGTCAAAAAGGACCATGAGTTCAGCATATCACAGCTGAGAGGACTGAATCAGCTAAGGGGATCAATAAGCATTTCTAGTCTTTACAATGCAGGGCATGAAGAGGCTAGCCAAGCAAGGCTCTGTGACAAGGATAACCTAACTTGTTTGCACCTGTCATGGCTGACTTTATCTAGGAACCGTGTTGCACGGCGTACTCTTCCTATCCTGGAGGATCTTAAACCACATTCTGGCCTTAAAAATCTGCAAGTTGTTGGATACAGGCATTCTTTACCATCATGGCTTTGCAGCACTGTCAATCTCACCTCTTTGCGGTCACTCCACCTGGATAGATGCATACGTTGGCAAACAATTCCACATCCCCAGCAGTTGCCTCTTCTCCAGGAGCTGCATTTGATTCAACTGCCTCGTGTTTACAAAATAGAGATTGGTCCTCTGAAGGTCCTTGAAATACGCTGGTTGCAAAATCTGAGGCAGTGCATACTTTTAGATAAGGAACAGTCATATGCTACCCTACAGATCCTTGAAGTGGAGGGATGCCCCAAATTGGATGAATTTCTATTGCAGATTTTCATGTCTTCGGGTGTACAAAGCACATACCAATTTCTTGGTATTCACAGGCTTAAGATACACAATGACTTCCTTCGTGCTAGCATCCCGCTCCTGCTCCTAAATTCTTTATCAGACATAGATCTGTGTGGTGAGCACTCAAAATTTACGAGGTTTCGACTAAAACCATTTGGCACATCAGATGGGTTGAGTCTACAAATCAAAGGAGATAGATATATTCAGAAGATAGAGGAAAGATTGTTCACATTAGAGAAACTCAAGGATCTGCGGGAACTTGAAATCCGGGACTATCAATCAGTGATATTCCAACGTCAATTCTGGGAAGGCTTCGAACAGTTGACATCATTGAAAAAGTTTAGAGTGATCAAGTGCCCAGAAATATTTTCTACCAACTTTGAGCTATTTCTGCCTCCGTCAGTTGAGGAACTTGAGTTGAGTGGATGCAACATTACATTGATACAACTATCACAACTCCTCGTGAACCTTCATTTACTTAAGAGTTTCAAGTTAACTAATTGCCAAGGGGTAACATCCTTACCTGTAGGGTTGTTTACAGATGAACAGAACACAATGTCAGAAGGCTCATGGCACATTCCTCCCAGATGCTTCACGAGTCTGGAAAGTTTGCAAATCTCTTTCACAACAGCTCCATCTGATGCAAATTCAATTATGCACTTTACGAGCAAGAAAGGCCTAGGAAGATTTGTATCTCTTAAGAAAATTGTTATAGAAAATTGCCCTACTCTGCTATCTAGAGCGCTTTCAGGAGGAGCATCTCATATATCTCCATCATCTTTGGATAAACTCTGCATGACTGGTATCCAAGACAGCACTCTGCAGTTCTCAGATGTCTCTTCCATCGCGGATTTAGATGTGTCTGGATGCCCGAAGTTGGCATGTCTCGACCTGAGTTCTTGTACCGCGCTAGAAAAGTTGTGTGTTATAGATTGCCGTTTGTTACAGTCAATTGAAGGTTTGCCGTCATGCTCAGCACTGAGGGATTTGAAAATTCGAAACTGTGCATTGCTGCCTTCGCTCAGCGCATCACTCCACACCCTGAAAACACTGAGCATAGAGAATAACACAAATCTAGCATCTCTGGAACTGAAATCATGCACATCATTGCAGAAACTATGCATCAAAGACTGCCCGGCACTGACATCATGGGAAGGTTTGAAATCCCTTGTTTCTCTTGAGATCTTGAAAGTTGAAGCGTCTCCTGGGTTCATAACGAGATGGATATCAGCAGCAGCTGAAGTTAATATCGAGGAGAAGAATTTCTCACTACCACTTGAAAAGCTCAACGTTGATAACATTGATGTCCTTTGTGTGCCCATATGCAGCCAGTTAACTTCTCTCAAGATATTATCCATTGAAGAGGATCGTCACGATCCAGATGGTCATGTGGAGTTTTTGACAGACAACCATGTCAAAGGACTGTCATTTCTCACCTGCTTGAGATTTCTTGATCTGGAAAACCTTGAGCAACTCCGGTCACTGCCTGCAGAACTTGGATCCCTTGCATCCCTGCAGAGACTACATGTTGGCAACTGTGGACATATTACTTCCCTGCCGGTAGGGGGTCTCCCAGCTTCGCTCAAGGACATGGAACTCTATAATTGCAGCAAAGAACTAAACGTACTGTGCCGAGATATGCTTAGACTTCGAAGAAACTTACATTTGTGGGTGGATGGCGACGAGGAGGATTTCTTTTCACAGAATTGCTCTGACGAAGAAATAAGTGAGCTTATGTTCGCATATCGTATAGCCTTTACACCAGGTTCTTTTTTGGAAGAACAGAACAATACGAGAACACCTTCTATTTTCGATGAAGGGAGCAAAAGAAACAAAATATCAAAATACAAGAGAAGAAAAAAGGCTACAGCCTACAGATGAAAGACTATTCTTGGAAGTGTTGAATCTAAATTGCCTACGTAACAAGAAGCTACGATTCCGGCTGACACTCTGGATTTTTTAGACAATGGAATCTTTATTATAAGACACAGCCAAATACTGTTACTGTGGATTGGTGTTGAAATACTGTCCAGTTTCAAGTGTTAAGGAAATAGAGCAGAACTTCAGACATCTTTCCTTTAAATAATGGAATTTTACACGGACATCTACCACTTTATTCATGCCAACCATTTAACAAAGGGTTAATT] [+] EMBL AK121298 [AAAAGGAGGAGAGGATTGTAAGTTTGCAACCAGCAGAGCTTTGCCCCGGGGCGTCGGCACGCACTGCCACCTCGCCCTCGAGGCCTCGACGGCGCCACAGTGCCACACCCATTCTCTGTTGATCCCTAGCTGTAGTTGTAGCTGGCAGATGGACAAGGCGGCGGTTGTTCCACTTCCAATCACCGGAGGAGTCAACGACGATCGTACTGCTGCGCTGCAGCAGTGGGCTTCCACCGTCGGCTTCGGAGGCGAGGTGGGGCGCCTCGTCGAAGCCCACCGACGCCTCGACTCGGTGCTCGCGGAGACGCAGGGGAAGGAGATCCGGAACAAGGAGCTCCAGCGGCGCCTCAGGGAGGCCTCGCATGATGCTGCCCGCGCCCGTGACCTCCTCGGCGAGCTCGAGTACTACCGCATCCGCGAGGAGGTGGAGCGCGACGACCACGATAAGCTATTGCATGACAATGCAAATGGAAATTTGCTTCTCTCCATGCCTCAAAGGGATGTTGAGTTCTTTAACAATGATGCAGCAAAAGATGACAAAGACACCACAGAAAGTTCTCTTAGCAACACAGATTCATCTGCATCTGCTCTTCAGGTTACTACGTACATTGCTAGTAGCAGTAGTCCAGTACCCTATCTGGAGACTCTTAACAAGTGCATCTCGAATGAGATAAGTAAATACACTGAAAAATGCTACAGGATAGCCAAACAGGTGAGTGAAGCTCTTGAGCTTGAAAGTCTGGATTACCTTTACGCGCACAAATACCAGAGAACAAGAACAGATCATCGGGAGACATCACCATGCCAAAGTGAACCCAAAGTTCATGGGAGGGACCAACAGCGTGACTTGATAATAAGCAAGTTAACAAGTGAGGAATGTGCTAGGAAGAAACTCTCTATCCTTGCCATCATCGGTGATGGAGGTATTGGGAAAACTACTCTGGCTAAGCTAGTCTTCAACAACTCAACAGTGTCAAAGCATTTTGACGTTCTGTTATGGGTTTATGTATCTGTTCACTTTGATCAAAATAAGATTATGCAGGAAATGTTGGACTCCTTTTGCGGGGATGAGCATGATGAAATCAAGAAATCGAAGGAGCTTCAACTCCAAGACAAACTTGACTACTTATTGAAGTCAAAACGAGTGCTACTTGTTATGGATGACATGTGGGAGGATAGCACAAAGGAAAAATGGGATGAGCTGTTAAATCCATTGCTTAAAAACGATGTTATGGGGAACAGTGTTCTTGTCACAACTCGTAAACCATCTGTGGCAACAATGATAGAAGCAGCAGATCACATCAACCTGGATGGTTTGAAAAAAGATGACTTTTGGTGTTTGTTCAAGGAATGTGTATTTGGACATGAGAACTATAAAGGAGAACCAAGACTGGAAAAAATTGGGCAGCAGATAGTTGACAAGTTAAAGGGCAATCCTTTAGCAGCAAAGACTGTAAGCAAAGTATTGAGAAGGAGCTTTGACGTTGATTACTGGAGGAGAATTCTGCATACCGGTGAATGGAAGTACAAAAATGATGAGAATGATATCATGCCGGCCTTGATGATCAGCTACAAATATCTTCCAGCTCACCTTCAAAGTTGTTTCTCGTACTGTGCTGTGTTCCCAAAGTATCATAGGTATGAGAAAGAGCGTCTGATCGATATGTGGATAGCGCAAGATTTGCTATGTTCCGCTGATATTCACACACGACCTGAGGACATTGGAAATGAATACTTTGATGATCTACTTGATTGGGGATTTTTCGAAAAACAGTTTGAGCACTCAACCTTACTCATCATGCATGATCTAATTCATGATCTGGCACAGAAGGTTTCATCTGACGAAAGCTTTACCATAGAGGGCAATGAGCCTAGGAATGCACCGCCATGTGTTCGTCATGTCAGTGTAATAACAGAGTGGGAGTACAAAACAAAATTGAATGGCACTGTGTATCCTAATGATTCTTTCCTCCAAGAGTTCTCTAATTCCTTCCGTGAGTTGCAACAAAGGAGCTTAAGCACATTGATGCTGTTTGGGCCACATGACTTGGATTTTGCAGACACGTTTCGGCAAGAACTCAATGAGGTAAGGTCAATCCGTGTGTTGAAACTGGAGATGGTCTTCTTTGACTTGGATTCATTGATAGGCAACATCTCAGCATTTGTCAATCTTCGCTATCTAGAACTGGGCTGCTTCTACAAGGGCCCCAGGCTGGAGCTACCAGAAGCTATATGCAGGCTGTATCACCTTAAAGTCCTGGATATAAAGAAGAACTGGGGTCCTAGCACATCTTTGCCAAGAGAAATGAGCAAGCTTGTTAACTTGCGGCATTTTATTGCTGAAAAGGAGTTACATGCAAAAATAGCTGGCATCGGAAAGATGGTTTCCCTGCAGGAGCTAAAGGCATTTGATGTCAAAAAGGACCATGAGTTCAGCATATCACAGCTGAGAGGACTGAATCAGCTAAGGGGATCAATAAGCATTTCTAGTCTTTACAATGCAGGGCATGAAGAGGCTAGCCAAGCAAGGCTCTGTGACAAGGATAACCTAACTTGTTTGCACCTGTCATGGCTGACTTTATCTAGGAACCGTGTTGCACGGCGTACTCTTCCTATCCTGGAGGATCTTAAACCACATTCTGGCCTTAAAAATCTGCAAGTTGTTGGATACAGGCATTCTTTACCATCATGGCTTTGCAGCACTGTCAATCTCACCTCTTTGCGGTCACTCCACCTGGATAGATGCATACGTTGGCAAACAATTCCACATCCCCAGCAGTTGCCTCTTCTCCAGGAGCTGCATTTGATTCAACTGCCTCGTGTTTACAAAATAGAGATTGGTCCTCTGAAGGTCCTTGAAATACGCTGGTTGCAAAATCTGAGGCAGTGCATACTTTTAGATAAGGAACAGTCATATGCTACCCTACAGATCCTTGAAGTGGAGGGATGCCCCAAATTGGATGAATTTCTATTGCAGATTTTCATGTCTTCGGGTGTACAAAGCACATACCAATTTCTTGGTATTCACAGGCTTAAGATACACAATGACTTCCTTCGTGCTAGCATCCCGCTCCTGCTCCTAAATTCTTTATCAGACATAGATCTGTGTGGTGAGCACTCAAAATTTACGAGGTTTCGACTAAAACCATTTGGCACATCAGATGGGTTGAGTCTACAAATCAAAGGAGATAGATATATTCAGAAGATAGAGGAAAGATTGTTCACATTAGAGAAACTCAAGGATCTGCGGGAACTTGAAATCCGGGACTATCAATCAGTGATATTCCAACGTCAATTCTGGGAAGGCTTCGAACAGTTGACATCATTGAAAAAGTTTAGAGTGATCAAGTGCCCAGAAATATTTTCTACCAACTTTGAGCTATTTCTGCCTCCGTCAGTTGAGGAACTTGAGTTGAGTGGATGCAACATTACATTGATACAACTATCACAACTCCTCGTGAACCTTCATTTACTTAAGAGTTTCAAGTTAACTAATTGCCAAGGGGTAACATCCTTACCTGTAGGGTTGTTTACAGATGAACAGAACACAATGTCAGAAGGCTCATGGCACATTCCTCCCAGATGCTTCACGAGTCTGGAAAGTTTGCAAATCTCTTTCACAACAGCTCCATCTGATGCAAATTCAATTATGCACTTTACGAGCAAGAAAGGCCTAGGAAGATTTGTATCTCTTAAGAAAATTGTTATAGAAAATTGCCCTACTCTGCTATCTAGAGCGCTTTCAGGAGGAGCATCTCATATATCTCCATCATCTTTGGATAAACTCTGCATGACTGGTATCCAAGACAGCACTCTGCAGTTCTCAGATGTCTCTTCCATCGCGGATTTAGATGTGTCTGGATGCCCGAAGTTGGCATGTCTCGACCTGAGTTCTTGTACCGCGCTAGAAAAGTTGTGTGTTATAGATTGCCGTTTGTTACAGTCAATTGAAGGTTTGCCGTCATGCTCAGCACTGAGGGATTTGAAAATTCGAAACTGTGCATTGCTGCCTTCGCTCAGCGCATCACTCCACACCCTGAAAACACTGAGCATAGAGAATAACACAAATCTAGCATCTCTGGAACTGAAATCATGCACATCATTGCAGAAACTATGCATCAAAGACTGCCCGGCACTGACATCATGGGAAGGTTTGAAATCCCTTGTTTCTCTTGAGATCTTGAAAGTTGAAGCGTCTCCTGGGTTCATAACGAGATGGATATCAGCAGCAGCTGAAGTTAATATCGAGGAGAAGAATTTCTCACTACCACTTGAAAAGCTCAACGTTGATAACATTGATGTCCTTTGTGTGCCCATATGCAGCCAGTTAACTTCTCTCAAGATATTATCCATTGAAGAGGATCGTCACGATCCAGATGGTCATGTGGAGTTTTTGACAGACAACCATGTCAAAGGACTGTCATTTCTCACCTGCTTGAGATTTCTTGATCTGGAAAACCTTGAGCAACTCCGGTCACTGCCTGCAGAACTTGGATCCCTTGCATCCCTGCAGAGACTACATGTTGGCAACTGTGGACATATTACTTCCCTGCCGGTAGGGGGTCTCCCAGCTTCGCTCAAGGACATGGAACTCTATAATTGCAGCAAAGAACTAAACGTACTGTGCCGAGATATGCTTAGACTTCGAAGAAACTTACATTTGTGGGTGGATGGCGACGAGGAGGATTTCTTTTCACAGAATTGCTCTGACGAAGAAATAAGTGAGCTTATGTTCGCATATCGTATAGCCTTTACACCAGGTTCTTTTTTGGAAGAACAGAACAATACGAGAACACCTTCTATTTTCGATGAAGGGAGCAAAAGAAACAAAATATCAAAATACAAGAGAAGAAAAAAGGCTACAGCCTACAGATGAAAGACTATTCTTGGAAGTGTTGAATCTAAATTGCCTACGTAACAAGAAGCTACGATTCCGGCTGACACTCTGGATTTTTTAGACAATGGAATCTTTATTATAAGACACAGCCAAATACTGTTACTGTGGATTGGTGTTGAAATACTGTCCAGTTTCAAGTGTTAAGGAAATAGAGCAGAACTTCAGACATCTTTCCTTTAAATAATGGAATTTTACACGGACATCTACCACTTTATTCATGCCAACCATTTAACAAAGGGTTAATT] [+] EMBL AF456244 [ AAGTTTGCAACCAGCAGAGCTTTGCCCCGGGGCGTCGGCACGCACTGCCACCTCGCCCTCGAGGCCTCGACGGCGCCACAGTGCCACACCCATTCTCTGTTGATCCCTAGCTGTAGTTGTAGCTGGCAGATGGACAAGGCGGCGGTTGTTCCACTTCCAATCACCGGAGGAGTCAACGACGATCGTACTGCTGCGCTGCAGCAGTGGGCTTCCACCGTCGGCTTCGGAGGCGAGGTGGGGCGCCTCGTCGAAGCCCACCGACGCCTCGACTCGGTGCTCGCGGAGACGCAGGGGAAGGAGATCCGGAACAAGGAGCTCCAGCGGCGCCTCAGGGAGGCCTCGCATGATGCTGCCCGCGCCCGTGACCTCCTCGGCGAGCTCGAGTACTACCGCATCCGCGAGGAGGTGGAGCGCGACGACCACGATAAGCTATTGCATGACAATGCAAATGGAAATTTGCTTCTCTCCATGCCTCAAAGGGATGTTGAGTTCTTTAACAATGATGCAGCAAAAGATGACAAAGACACCACAGAAAGTTCTCTTAGCAACACAGATTCATCTGCATCTGCTCTTCAGGTTACTACGTACATTGCTAGTAGCAGTAGTCCAGTACCCTATCTGGAGACTCTTAACAAGTGCATCTCGAATGAGATAAGTAAATACACTGAAAAATGCTACAGGATAGCCAAACAGGTGAGTGAAGCTCTTGAGCTTGAAAGTCTGGATTACCTTTACGCGCACAAATACCAGAGAACAAGAACAGATCATCGGGAGACATCACCATGCCAAAGTGAACCCAAAGTTCATGGGAGGGACCAACAGCGTGACTTGATAATAAGCAAGTTAACAAGTGAGGAATGTGCTAGGAAGAAACTCTCTATCCTTGCCATCATCGGTGATGGAGGTATTGGGAAAACTACTCTGGCTAAGCTAGTCTTCAACAACTCAACAGTGTCAAAGCATTTTGACGTTCTGTTATGGGTTTATGTATCTGTTCACTTTGATCAAAATAAGATTATGCAGGAAATGTTGGACTCCTTTTGCGGGGATGAGCATGATGAAATCAAGAAATCGAAGGAGCTTCAACTCCAAGACAAACTTGACTACTTATTGAAGTCAAAACGAGTGCTACTTGTTATGGATGACATGTGGGAGGATAGCACAAAGGAAAAATGGGATGAGCTGTTAAATCCATTGCTTAAAAACGATGTTATGGGGAACAGTGTTCTTGTCACAACTCGTAAACCATCTGTGGCAACAATGATAGAAGCAGCAGATCACATCAACCTGGATGGTTTGAAAAAAGATGACTTTTGGTGTTTGTTCAAGGAATGTGTATTTGGACATGAGAACTATAAAGGAGAACCAAGACTGGAAAAAATTGGGCAGCAGATAGTTGACAAGTTAAAGGGCAACCC ] consensusID : consensus_4152#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 507 fasta sequence [ACCCTCTTAAGGGAATAGCTTGCGGCCGCTCTAACATCAGAATGGTGCGACGAGGAGGATTTCTTTTCACAGAATTGCTCTGACGAAGAAATAAGTTAGCTTATGTTCGCATATCGTATAGCCTTTACACCAGGTTCTTTTTTGGAAGAACAGAACAATACGAGAACACCTTCTATTTTCGATGAAGGGAGCAAAAGAAACAAAAAATCAAAATACAAGAGAAGAAAAAAGGCTACAGCCTACAGATGAAAGACTATTCTTGGAAGTGTTGAATCTAAATTGCCTACGTAACAAGAAGCTACGATTCCGGCTGACACTCTGGATTTTTTAGACAATGGAATCTTTATTATAAGACACAGCCAAATACTGTTACTGTGGATTGGTGTTGAAATACTGTCCAGTTTCAAGTGTTAAGGAAATAGAGCAGAACTTCAGACATCTTTCCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAGAGGGGCCGCTCCACCATCAAACTG] [+] EMBL BI306385 [ACCCTCTTAAGGGAATAGCTTGCGGCCGCTCTAACATCAGAATGGTGCGACGAGGAGGATTTCTTTTCACAGAATTGCTCTGACGAAGAAATAAGTTAGCTTATGTTCGCATATCGTATAGCCTTTACACCAGGTTCTTTTTTGGAAGAACAGAACAATACGAGAACACCTTCTATTTTCGATGAAGGGAGCAAAAGAAACAAAAAATCAAAATACAAGAGAAGAAAAAAGGCTACAGCCTACAGATGAAAGACTATTCTTGGAAGTGTTGAATCTAAATTGCCTACGTAACAAGAAGCTACGATTCCGGCTGACACTCTGGATTTTTTAGACAATGGAATCTTTATTATAAGACACAGCCAAATACTGTTACTGTGGATTGGTGTTGAAATACTGTCCAGTTTCAAGTGTTAAGGAAATAGAGCAGAACTTCAGACATCTTTCCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAGAGGGGCCGCTCCACCATCAAACTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_4152#0 AAAAGGAGGAGAGGATTGTAAGTTTGCAACCAGCAGAGCTTTGCCCCGGGGCGTCGGCAC 60 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GCACTGCCACCTCGCCCTCGAGGCCTCGACGGCGCCACAGTGCCACACCCATTCTCTGTT 120 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GATCCCTAGCTGTAGTTGTAGCTGGCAGATGGACAAGGCGGCGGTTGTTCCACTTCCAAT 180 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 CACCGGAGGAGTCAACGACGATCGTACTGCTGCGCTGCAGCAGTGGGCTTCCACCGTCGG 240 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 CTTCGGAGGCGAGGTGGGGCGCCTCGTCGAAGCCCACCGACGCCTCGACTCGGTGCTCGC 300 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GGAGACGCAGGGGAAGGAGATCCGGAACAAGGAGCTCCAGCGGCGCCTCAGGGAGGCCTC 360 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GCATGATGCTGCCCGCGCCCGTGACCTCCTCGGCGAGCTCGAGTACTACCGCATCCGCGA 420 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GGAGGTGGAGCGCGACGACCACGATAAGCTATTGCATGACAATGCAAATGGAAATTTGCT 480 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TCTCTCCATGCCTCAAAGGGATGTTGAGTTCTTTAACAATGATGCAGCAAAAGATGACAA 540 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 AGACACCACAGAAAGTTCTCTTAGCAACACAGATTCATCTGCATCTGCTCTTCAGGTTAC 600 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TACGTACATTGCTAGTAGCAGTAGTCCAGTACCCTATCTGGAGACTCTTAACAAGTGCAT 660 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 CTCGAATGAGATAAGTAAATACACTGAAAAATGCTACAGGATAGCCAAACAGGTGAGTGA 720 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 AGCTCTTGAGCTTGAAAGTCTGGATTACCTTTACGCGCACAAATACCAGAGAACAAGAAC 780 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 AGATCATCGGGAGACATCACCATGCCAAAGTGAACCCAAAGTTCATGGGAGGGACCAACA 840 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GCGTGACTTGATAATAAGCAAGTTAACAAGTGAGGAATGTGCTAGGAAGAAACTCTCTAT 900 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 CCTTGCCATCATCGGTGATGGAGGTATTGGGAAAACTACTCTGGCTAAGCTAGTCTTCAA 960 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 CAACTCAACAGTGTCAAAGCATTTTGACGTTCTGTTATGGGTTTATGTATCTGTTCACTT 1020 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TGATCAAAATAAGATTATGCAGGAAATGTTGGACTCCTTTTGCGGGGATGAGCATGATGA 1080 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 AATCAAGAAATCGAAGGAGCTTCAACTCCAAGACAAACTTGACTACTTATTGAAGTCAAA 1140 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 ACGAGTGCTACTTGTTATGGATGACATGTGGGAGGATAGCACAAAGGAAAAATGGGATGA 1200 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GCTGTTAAATCCATTGCTTAAAAACGATGTTATGGGGAACAGTGTTCTTGTCACAACTCG 1260 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TAAACCATCTGTGGCAACAATGATAGAAGCAGCAGATCACATCAACCTGGATGGTTTGAA 1320 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 AAAAGATGACTTTTGGTGTTTGTTCAAGGAATGTGTATTTGGACATGAGAACTATAAAGG 1380 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 AGAACCAAGACTGGAAAAAATTGGGCAGCAGATAGTTGACAAGTTAAAGGGCAATCCTTT 1440 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 AGCAGCAAAGACTGTAAGCAAAGTATTGAGAAGGAGCTTTGACGTTGATTACTGGAGGAG 1500 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 AATTCTGCATACCGGTGAATGGAAGTACAAAAATGATGAGAATGATATCATGCCGGCCTT 1560 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GATGATCAGCTACAAATATCTTCCAGCTCACCTTCAAAGTTGTTTCTCGTACTGTGCTGT 1620 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GTTCCCAAAGTATCATAGGTATGAGAAAGAGCGTCTGATCGATATGTGGATAGCGCAAGA 1680 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TTTGCTATGTTCCGCTGATATTCACACACGACCTGAGGACATTGGAAATGAATACTTTGA 1740 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TGATCTACTTGATTGGGGATTTTTCGAAAAACAGTTTGAGCACTCAACCTTACTCATCAT 1800 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GCATGATCTAATTCATGATCTGGCACAGAAGGTTTCATCTGACGAAAGCTTTACCATAGA 1860 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GGGCAATGAGCCTAGGAATGCACCGCCATGTGTTCGTCATGTCAGTGTAATAACAGAGTG 1920 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GGAGTACAAAACAAAATTGAATGGCACTGTGTATCCTAATGATTCTTTCCTCCAAGAGTT 1980 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 CTCTAATTCCTTCCGTGAGTTGCAACAAAGGAGCTTAAGCACATTGATGCTGTTTGGGCC 2040 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 ACATGACTTGGATTTTGCAGACACGTTTCGGCAAGAACTCAATGAGGTAAGGTCAATCCG 2100 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TGTGTTGAAACTGGAGATGGTCTTCTTTGACTTGGATTCATTGATAGGCAACATCTCAGC 2160 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 ATTTGTCAATCTTCGCTATCTAGAACTGGGCTGCTTCTACAAGGGCCCCAGGCTGGAGCT 2220 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 ACCAGAAGCTATATGCAGGCTGTATCACCTTAAAGTCCTGGATATAAAGAAGAACTGGGG 2280 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TCCTAGCACATCTTTGCCAAGAGAAATGAGCAAGCTTGTTAACTTGCGGCATTTTATTGC 2340 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TGAAAAGGAGTTACATGCAAAAATAGCTGGCATCGGAAAGATGGTTTCCCTGCAGGAGCT 2400 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 AAAGGCATTTGATGTCAAAAAGGACCATGAGTTCAGCATATCACAGCTGAGAGGACTGAA 2460 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TCAGCTAAGGGGATCAATAAGCATTTCTAGTCTTTACAATGCAGGGCATGAAGAGGCTAG 2520 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 CCAAGCAAGGCTCTGTGACAAGGATAACCTAACTTGTTTGCACCTGTCATGGCTGACTTT 2580 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 ATCTAGGAACCGTGTTGCACGGCGTACTCTTCCTATCCTGGAGGATCTTAAACCACATTC 2640 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TGGCCTTAAAAATCTGCAAGTTGTTGGATACAGGCATTCTTTACCATCATGGCTTTGCAG 2700 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 CACTGTCAATCTCACCTCTTTGCGGTCACTCCACCTGGATAGATGCATACGTTGGCAAAC 2760 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 AATTCCACATCCCCAGCAGTTGCCTCTTCTCCAGGAGCTGCATTTGATTCAACTGCCTCG 2820 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TGTTTACAAAATAGAGATTGGTCCTCTGAAGGTCCTTGAAATACGCTGGTTGCAAAATCT 2880 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GAGGCAGTGCATACTTTTAGATAAGGAACAGTCATATGCTACCCTACAGATCCTTGAAGT 2940 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GGAGGGATGCCCCAAATTGGATGAATTTCTATTGCAGATTTTCATGTCTTCGGGTGTACA 3000 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 AAGCACATACCAATTTCTTGGTATTCACAGGCTTAAGATACACAATGACTTCCTTCGTGC 3060 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TAGCATCCCGCTCCTGCTCCTAAATTCTTTATCAGACATAGATCTGTGTGGTGAGCACTC 3120 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 AAAATTTACGAGGTTTCGACTAAAACCATTTGGCACATCAGATGGGTTGAGTCTACAAAT 3180 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 CAAAGGAGATAGATATATTCAGAAGATAGAGGAAAGATTGTTCACATTAGAGAAACTCAA 3240 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GGATCTGCGGGAACTTGAAATCCGGGACTATCAATCAGTGATATTCCAACGTCAATTCTG 3300 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GGAAGGCTTCGAACAGTTGACATCATTGAAAAAGTTTAGAGTGATCAAGTGCCCAGAAAT 3360 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 ATTTTCTACCAACTTTGAGCTATTTCTGCCTCCGTCAGTTGAGGAACTTGAGTTGAGTGG 3420 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 ATGCAACATTACATTGATACAACTATCACAACTCCTCGTGAACCTTCATTTACTTAAGAG 3480 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TTTCAAGTTAACTAATTGCCAAGGGGTAACATCCTTACCTGTAGGGTTGTTTACAGATGA 3540 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 ACAGAACACAATGTCAGAAGGCTCATGGCACATTCCTCCCAGATGCTTCACGAGTCTGGA 3600 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 AAGTTTGCAAATCTCTTTCACAACAGCTCCATCTGATGCAAATTCAATTATGCACTTTAC 3660 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GAGCAAGAAAGGCCTAGGAAGATTTGTATCTCTTAAGAAAATTGTTATAGAAAATTGCCC 3720 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TACTCTGCTATCTAGAGCGCTTTCAGGAGGAGCATCTCATATATCTCCATCATCTTTGGA 3780 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TAAACTCTGCATGACTGGTATCCAAGACAGCACTCTGCAGTTCTCAGATGTCTCTTCCAT 3840 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 CGCGGATTTAGATGTGTCTGGATGCCCGAAGTTGGCATGTCTCGACCTGAGTTCTTGTAC 3900 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 CGCGCTAGAAAAGTTGTGTGTTATAGATTGCCGTTTGTTACAGTCAATTGAAGGTTTGCC 3960 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GTCATGCTCAGCACTGAGGGATTTGAAAATTCGAAACTGTGCATTGCTGCCTTCGCTCAG 4020 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 CGCATCACTCCACACCCTGAAAACACTGAGCATAGAGAATAACACAAATCTAGCATCTCT 4080 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GGAACTGAAATCATGCACATCATTGCAGAAACTATGCATCAAAGACTGCCCGGCACTGAC 4140 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 ATCATGGGAAGGTTTGAAATCCCTTGTTTCTCTTGAGATCTTGAAAGTTGAAGCGTCTCC 4200 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TGGGTTCATAACGAGATGGATATCAGCAGCAGCTGAAGTTAATATCGAGGAGAAGAATTT 4260 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 CTCACTACCACTTGAAAAGCTCAACGTTGATAACATTGATGTCCTTTGTGTGCCCATATG 4320 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 CAGCCAGTTAACTTCTCTCAAGATATTATCCATTGAAGAGGATCGTCACGATCCAGATGG 4380 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TCATGTGGAGTTTTTGACAGACAACCATGTCAAAGGACTGTCATTTCTCACCTGCTTGAG 4440 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 ATTTCTTGATCTGGAAAACCTTGAGCAACTCCGGTCACTGCCTGCAGAACTTGGATCCCT 4500 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 TGCATCCCTGCAGAGACTACATGTTGGCAACTGTGGACATATTACTTCCCTGCCGGTAGG 4560 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 GGGTCTCCCAGCTTCGCTCAAGGACATGGAACTCTATAATTGCAGCAAAGAACTAAACGT 4620 consensus_4152#1 ------------------------------------------------------------ consensus_4152#0 ACTGTGCCGAGATATGCTTAGACTTCGAAGAAACTTACATTTGTGGGTGGATGGCGACGA 4680 consensus_4152#1 ACCCTCTTAAGGGAA---TAGCTTGCGGCCGCTCTAACATCA--GAATGGT--GCGACGA 53 ** * ** * *** * ** ** **** * *** ******* consensus_4152#0 GGAGGATTTCTTTTCACAGAATTGCTCTGACGAAGAAATAAGTGAGCTTATGTTCGCATA 4740 consensus_4152#1 GGAGGATTTCTTTTCACAGAATTGCTCTGACGAAGAAATAAGTTAGCTTATGTTCGCATA 113 ******************************************* **************** consensus_4152#0 TCGTATAGCCTTTACACCAGGTTCTTTTTTGGAAGAACAGAACAATACGAGAACACCTTC 4800 consensus_4152#1 TCGTATAGCCTTTACACCAGGTTCTTTTTTGGAAGAACAGAACAATACGAGAACACCTTC 173 ************************************************************ consensus_4152#0 TATTTTCGATGAAGGGAGCAAAAGAAACAAAATATCAAAATACAAGAGAAGAAAAAAGGC 4860 consensus_4152#1 TATTTTCGATGAAGGGAGCAAAAGAAACAAAAAATCAAAATACAAGAGAAGAAAAAAGGC 233 ******************************** *************************** consensus_4152#0 TACAGCCTACAGATGAAAGACTATTCTTGGAAGTGTTGAATCTAAATTGCCTACGTAACA 4920 consensus_4152#1 TACAGCCTACAGATGAAAGACTATTCTTGGAAGTGTTGAATCTAAATTGCCTACGTAACA 293 ************************************************************ consensus_4152#0 AGAAGCTACGATTCCGGCTGACACTCTGGATTTTTTAGACAATGGAATCTTTATTATAAG 4980 consensus_4152#1 AGAAGCTACGATTCCGGCTGACACTCTGGATTTTTTAGACAATGGAATCTTTATTATAAG 353 ************************************************************ consensus_4152#0 ACACAGCCAAATACTGTTACTGTGGATTGGTGTTGAAATACTGTCCAGTTTCAAGTGTTA 5040 consensus_4152#1 ACACAGCCAAATACTGTTACTGTGGATTGGTGTTGAAATACTGTCCAGTTTCAAGTGTTA 413 ************************************************************ consensus_4152#0 AGGAAATAGAGCAGAACTTCAGACATCTTTCCTTTAAATAATGGAATTTTACACGGACAT 5100 consensus_4152#1 AGGAAATAGAGCAGAACTTCAGACATCTTTCCTTTTAAAAAAAAAAAAAAAAAAAAAAAA 473 *********************************** ** ** ** * * * * consensus_4152#0 CTACCACTTTATTCATGCCAACCATTTAACAAAGGGTTAATT 5142 consensus_4152#1 AAAAAACCAGA--GGGGCCGCTCCACCATCAAACTG------ 507 * ** * *** * * **** * |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||