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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4162 cluster # 4162       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4162#0 length = 909 sequences # 3  

consensusID : consensus_4162#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 909
fasta sequence
                              [CGAGCTCGTSCAATTCGNGCASGAAGGCAGCAGCCATCCTCCGTCGGCGATGGCGGGCGGCTCAACCTCCTCCTCCTCGTCGTGGGGCCCCAGCCGGCTCTGGTGACCGCGGTGGTGGCGCTGCTGGGGCTCGGCCTCGCGCCTACATCGTCGGCCGCAGCTCTACTGGC-CGCAGCGAGGCGCTCGGCCGCTCCACGGGGGCGTGT-CCGCGTGCGACTGCGMCTGCGACGCCCGCCCGCTGCTCGCGCTCCCCGAAGACT-VTYCCAAACAATTCAAGGATGTTAAGAGCCGTGCGTCTGGTGAAGAAACAGAGAAGAGTTTCACGGAGCTACTCATAGAAGAACTGAAGCAGAGAGAAGAAGAGGCAACACAAGCTCAGCAGCAAGCAGATGTAAAATTGCTGGAGGCGAAAAAATTAGCTTCACAATATCAAAAGGAGGCTGACAAATGCAGTTCAGGTATGGATACATGTGAAGAAGCCCGGGAAAAATCATCAGAAGCATTGGTTGAACAAAGGAAACTGACTGCTTTGTGGGAAGAAAGAGCTCGTGAACTAGGATGGAAACCTGGGAATATCAAACCACACCAGACGTAGTAACGAGCCCTAGCGGGATCGCGAGCAGCTCAAGCCACAGAGATCTAATTCCACACATGCTCCTCAAAGATATAGTAAAGTGACCGAGGTAACAAAGGTGCGACCTTACCTCCGTTTTGCGCTGCTTCACAAGCTTTTGTCCATAGTTGATTTATATTCAGATTGTAGTATACGTCCATAGCTGTTTGTGAGCATATGTTAAAATGATCATAGGATCAGAATGCTGCTCATCCACCTGTATCTGTATGTCTTGAAGGGAATATTGGTTGTTGTGTATGATGATGGTAATAAAGGAATTGTAGTCCAAGTGCATC]

[+] EMBL AA754337             [CGAGCTCGTSCAATTCGNGCASGAAGGCAGCAGCCATCCTCCGTCGGCGATGGCGGGCGGCTCAACCTCCTCCTCCTCGTCGTGGGGCCCCAGCCGGCTCTGGTGACCGCGGTGGTGGCGCTGCTGGGGCTCGGCCTCGCGCCTACATCGTCGGCCGCAGCTCTACTGGCACGCAGCGAGGCGCTCGGCCGCTCCACGGGGGCGTGT CCGCGTGCGACTGCGMCTGCGACGCCCGCCCGCTGCTCGCGCTCCCCGAAGACTSVTYCCAAACAATTCAAGGATGTTAAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK062835             [                                                                                                                                                                         c gcCAGCGAGGCGCTCGGCCGCTCCACGGGGGCGTGTCCCGCGTGCGACTGCGACTGCGACGCCCGCCCGCTGCTCGCGCTCCCCGAAGACT GTTCCAAACAATTCAAGGATGTTAAGAGCCGTGCGTCTGGTGAAGAAACAGAGAAGAGTTTCACGGAGCTACTCATAGAAGAACTGAAGCAGAGAGAAGAAGAGGCAACACAAGCTCAGCAGCAAGCAGATGTAAAATTGCTGGAGGCGAAAAAATTAGCTTCACAATATCAAAAGGAGGCTGACAAATGCAGTTCAGGTATGGATACATGTGAAGAAGCCCGGGAAAAATCATCAGAAGCATTGGTTGAACAAAGGAAACTGACTGCTTTGTGGGAAGAAAGAGCTCGTGAACTAGGATGGAAACCTGGGAATATCAAACCACACCAGACGTAGTAACGAGCCCTAGCGGGATCGCGAGCAGCTCAAGCCACAGAGATCTAATTCCACACATGCTCCTCAAAGATATAGTAAAGTGACCGAGGTAACAAAGGTGCGACCTTACCTCCGTTTTGCGCTGCTTCACAAGCTTTTGTCCATAGTTGATTTATATTCAGATTGTAGTATACGTCCATAGCTGTTTGTGAGCATATGTTAAAATGATCATAGGATCAGAATGCTGCTCATCCACCTGTATCTGTATGTCTTGAAGGGAATATTGGTTGTTGTGTATGATGATGGTAATAAAGGAATTGTAGTCCAAGTGCATC]
[+] EMBL AU033290             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AACCACACCAGACGTAGTAACGAGCCCTAGCGGGATCGCGAGCAGCTCAAGCCACAGAGATCTAATTCCACACATGCTCCTCAAAGATATAGTAAAGTGACCGAGGTAACAAAGGTGCGACCTTACCTCCGTTTTGCGCTGCTTCACAAGCTTTTGTCCATAGTTGATTTATATTCAGATTGTAGTATACGTCCATAGCTGTTTGTGAGCATATGTTAAAATGATCATAGGATCAGAATGCTGCTCATCCACCTGTATCTGTATGTCTTGAAGGGAATATTGGTTGTTGTGTATGATGATGGTAATAAAGGAATTGTAGTCCAAGTG    ]


>consensus_4162#0 CGAGCTCGTSCAATTCGNGCASGAAGGCAGCAGCCATCCTCCGTCGGCGATGGCGGGCGG CTCAACCTCCTCCTCCTCGTCGTGGGGCCCCAGCCGGCTCTGGTGACCGCGGTGGTGGCG CTGCTGGGGCTCGGCCTCGCGCCTACATCGTCGGCCGCAGCTCTACTGGCCGCAGCGAGG CGCTCGGCCGCTCCACGGGGGCGTGTCCGCGTGCGACTGCGMCTGCGACGCCCGCCCGCT GCTCGCGCTCCCCGAAGACTVTYCCAAACAATTCAAGGATGTTAAGAGCCGTGCGTCTGG TGAAGAAACAGAGAAGAGTTTCACGGAGCTACTCATAGAAGAACTGAAGCAGAGAGAAGA AGAGGCAACACAAGCTCAGCAGCAAGCAGATGTAAAATTGCTGGAGGCGAAAAAATTAGC TTCACAATATCAAAAGGAGGCTGACAAATGCAGTTCAGGTATGGATACATGTGAAGAAGC CCGGGAAAAATCATCAGAAGCATTGGTTGAACAAAGGAAACTGACTGCTTTGTGGGAAGA AAGAGCTCGTGAACTAGGATGGAAACCTGGGAATATCAAACCACACCAGACGTAGTAACG AGCCCTAGCGGGATCGCGAGCAGCTCAAGCCACAGAGATCTAATTCCACACATGCTCCTC AAAGATATAGTAAAGTGACCGAGGTAACAAAGGTGCGACCTTACCTCCGTTTTGCGCTGC TTCACAAGCTTTTGTCCATAGTTGATTTATATTCAGATTGTAGTATACGTCCATAGCTGT TTGTGAGCATATGTTAAAATGATCATAGGATCAGAATGCTGCTCATCCACCTGTATCTGT ATGTCTTGAAGGGAATATTGGTTGTTGTGTATGATGATGGTAATAAAGGAATTGTAGTCC AAGTGCATC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)