These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4162#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 909 fasta sequence [CGAGCTCGTSCAATTCGNGCASGAAGGCAGCAGCCATCCTCCGTCGGCGATGGCGGGCGGCTCAACCTCCTCCTCCTCGTCGTGGGGCCCCAGCCGGCTCTGGTGACCGCGGTGGTGGCGCTGCTGGGGCTCGGCCTCGCGCCTACATCGTCGGCCGCAGCTCTACTGGC-CGCAGCGAGGCGCTCGGCCGCTCCACGGGGGCGTGT-CCGCGTGCGACTGCGMCTGCGACGCCCGCCCGCTGCTCGCGCTCCCCGAAGACT-VTYCCAAACAATTCAAGGATGTTAAGAGCCGTGCGTCTGGTGAAGAAACAGAGAAGAGTTTCACGGAGCTACTCATAGAAGAACTGAAGCAGAGAGAAGAAGAGGCAACACAAGCTCAGCAGCAAGCAGATGTAAAATTGCTGGAGGCGAAAAAATTAGCTTCACAATATCAAAAGGAGGCTGACAAATGCAGTTCAGGTATGGATACATGTGAAGAAGCCCGGGAAAAATCATCAGAAGCATTGGTTGAACAAAGGAAACTGACTGCTTTGTGGGAAGAAAGAGCTCGTGAACTAGGATGGAAACCTGGGAATATCAAACCACACCAGACGTAGTAACGAGCCCTAGCGGGATCGCGAGCAGCTCAAGCCACAGAGATCTAATTCCACACATGCTCCTCAAAGATATAGTAAAGTGACCGAGGTAACAAAGGTGCGACCTTACCTCCGTTTTGCGCTGCTTCACAAGCTTTTGTCCATAGTTGATTTATATTCAGATTGTAGTATACGTCCATAGCTGTTTGTGAGCATATGTTAAAATGATCATAGGATCAGAATGCTGCTCATCCACCTGTATCTGTATGTCTTGAAGGGAATATTGGTTGTTGTGTATGATGATGGTAATAAAGGAATTGTAGTCCAAGTGCATC] [+] EMBL AA754337 [CGAGCTCGTSCAATTCGNGCASGAAGGCAGCAGCCATCCTCCGTCGGCGATGGCGGGCGGCTCAACCTCCTCCTCCTCGTCGTGGGGCCCCAGCCGGCTCTGGTGACCGCGGTGGTGGCGCTGCTGGGGCTCGGCCTCGCGCCTACATCGTCGGCCGCAGCTCTACTGGCACGCAGCGAGGCGCTCGGCCGCTCCACGGGGGCGTGT CCGCGTGCGACTGCGMCTGCGACGCCCGCCCGCTGCTCGCGCTCCCCGAAGACTSVTYCCAAACAATTCAAGGATGTTAAGAG ] [+] EMBL AK062835 [ c gcCAGCGAGGCGCTCGGCCGCTCCACGGGGGCGTGTCCCGCGTGCGACTGCGACTGCGACGCCCGCCCGCTGCTCGCGCTCCCCGAAGACT GTTCCAAACAATTCAAGGATGTTAAGAGCCGTGCGTCTGGTGAAGAAACAGAGAAGAGTTTCACGGAGCTACTCATAGAAGAACTGAAGCAGAGAGAAGAAGAGGCAACACAAGCTCAGCAGCAAGCAGATGTAAAATTGCTGGAGGCGAAAAAATTAGCTTCACAATATCAAAAGGAGGCTGACAAATGCAGTTCAGGTATGGATACATGTGAAGAAGCCCGGGAAAAATCATCAGAAGCATTGGTTGAACAAAGGAAACTGACTGCTTTGTGGGAAGAAAGAGCTCGTGAACTAGGATGGAAACCTGGGAATATCAAACCACACCAGACGTAGTAACGAGCCCTAGCGGGATCGCGAGCAGCTCAAGCCACAGAGATCTAATTCCACACATGCTCCTCAAAGATATAGTAAAGTGACCGAGGTAACAAAGGTGCGACCTTACCTCCGTTTTGCGCTGCTTCACAAGCTTTTGTCCATAGTTGATTTATATTCAGATTGTAGTATACGTCCATAGCTGTTTGTGAGCATATGTTAAAATGATCATAGGATCAGAATGCTGCTCATCCACCTGTATCTGTATGTCTTGAAGGGAATATTGGTTGTTGTGTATGATGATGGTAATAAAGGAATTGTAGTCCAAGTGCATC] [+] EMBL AU033290 [ AACCACACCAGACGTAGTAACGAGCCCTAGCGGGATCGCGAGCAGCTCAAGCCACAGAGATCTAATTCCACACATGCTCCTCAAAGATATAGTAAAGTGACCGAGGTAACAAAGGTGCGACCTTACCTCCGTTTTGCGCTGCTTCACAAGCTTTTGTCCATAGTTGATTTATATTCAGATTGTAGTATACGTCCATAGCTGTTTGTGAGCATATGTTAAAATGATCATAGGATCAGAATGCTGCTCATCCACCTGTATCTGTATGTCTTGAAGGGAATATTGGTTGTTGTGTATGATGATGGTAATAAAGGAATTGTAGTCCAAGTG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||