These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4163#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3367 fasta sequence [GCTTGTGCCCAACAAGAGGAGAGCAAAATTTCCCCTCGTCGTCAGCTCGCTCGCCTGCGCCACCGCCGACCCCCCATCCATCCCTCCCCGGCGACGGCGACCGGAGCAGAGGGGGGTTAGGCTCGCCGCCGCCGCCGCCGCCGCCGCTTCTGCTGCTTCTCCCGCCGCCCCGCATCGCATCTATCCCGTAATGATGGGGGTTACCACCACGCTCAACGAGGACACTGAACCCTCTATTCCACCTGGATTTGGACCTTTTGCTACCCTTCCGTTATGGGGAATCCACAATGATGCCAAACCTGCTGTTACTCATTCTACTCCTGTTCAAGCATTGCAAAGCATTAGAAAAGACAGCGAAGAATGCCAACCCAGTGCGGCTGTGTCTCGGAGTGATACACCTTGCAGCACTTCCGGAACCCAGACATGCAGAAAATCACTGCGTAACAGACCCCCAATAGACTATAGCCGCTTTGAACATATATCGGATGAAGATTCTGATGTCGAAATAGTGGAAAAGGATGTAAGTTCAACGAGACGCAGACAACAGCTACCGAAAGGAGTACTTCGAGGATGTGCAGAATGCAGTGACTGTCAAAAGGTTATC-GCAAAATGGAATCCAGCTGGTGCACGCAGGCCTGTTCTTGATGAGGCTCCTGTTTTCTATCCAACAGAGGAGGAATTTGAAGACACTCTAAAATACATTGAGAGTATACGGCCAATGGCGGAACCATATGGTATTTGCCGTATTGTCCCACCATCTTCTTGGAAGCCTCCATGCCTTCTTAAAGATAAAAGCATATGGGAAGGATCAAAATTCTCTACTCGGGTACAAAAGGTTGACAAGCTCCAAAA-CCGTAAATCATCAAAAAAGGGCAGAAGAGGTGGAATGATGAAGAGGAGAAAGCTTGCAGAGTCAGAGGAGAACAGTGCCACTGCTCACACTCAGACAGGGATGCAGCAAAGTCCAGAGAGATTTGGATTTGAACCTGGGCCAGAGTTCACGTTACAGACATTTCAGAAATATGCAGATGATTTCAGTAAGCAGTACTTTAGGAAAGATACATCGATGGATTCAGTACCATCAGTGGAAGATATTGAAGGTGAGTACTGGCGCATCGTTGAGGTTCCCACAGAAGAGATAGAGGTGATATATGGTGCTGATCTGGAGACTGGAACTTTCGGCAGTGGTTTTCCAAAATTATCTCCTGAGACAAAATCTGATGCTGAGGATAAATATGCACAATCTGGTTGGAATCTAAATAACTTGCCTAGACTACAAGGTTCAGTTCTTTCTTTCGAGGGCGGTGACATTTCTGGTGTTCTAGTGCCTTGGGTGTATGTTGGCATGTGTTTTTCATCATTCTGCTGGCATGTTGAAGACCATCATTTATACTCACTAAACTACATGCATTGGGGTGCCCCAAAGTTGTGGTATGGAGTTCCAGGAAAGGATGCTGTGAATTTGGAATCTGCAATGAGGAAACATCTACCTGAATTATTTGAGGAGCAACCTGATTTGCTACACAACCTTGTTACCCAGTTTTCACCATCGCTGCTGAAATCTGAAGGAGTACATGTATACCGTTGTGTTCAGCATGAGGGCGAGTTTGTCTTGACATTCCCAAGGGCGTACCATGCTGGTTTCAATTGTGGCTTCAATTGTGCCGAAGCTGTTAATGTGGCTCCTATTGATTGGTTACCGATTGGACATAATGCTGTAGAGCTTTATCGTGAGCAAGCTAGGAAAATAACCATTTCTCATGATAAGTTGTTGTTGGGGGCTGCAAGAGAAGCAATAAGAGCTCAGTGGGATATCCTATTCCTCAAGAGGAATACTGCTGATAATATGAGGTGGAAGAGTATATGCGGAGCTGATAGCACTATATTCAAGGCTCTTAAGGCACGAATTGAGACAGAGTTGGTGCAAAGGAAAACTCTAGGTGTTCCAGCTCAATCAAGGAAAATGGATGCTGAATTCGATTCCATTGATAGGGAATGTGCCTTGTGCTACTATGATTTACATCTTTCTGCTTCTGGCTGTCCATGCTGCCCAGAGAAATATGCTTGCCTTGTACATGCAAAGCAACTTTGCTCATGTGACTGGGACAAAAGGTTTTTCCTATTCCGCTATGATGTCAATGAGCTAAATATCTTAGCTGATGCTTTAGGGGGGAAATTAAGTGCCATTCATAGATGGGGCGTCTCTGATCTTGGATTAAGTTTGAGTTCATGTGTCAAACGAGAAAAGGTCCAAGATTCCAAGACTGTTCGCAGATTAACTGATGGTCCAAGAAGGTCTTACATGTCACAGGCATCAGCAGTATCCTTGGTTTCTTCTTCTACTTCCAATGAACAGAAAGATGAAGGAAATAAGATCATGAAGATAGCTAGCCCACAGACAAATAATGTGTGCCCTTCTGTCGAGCAAAGGAAATCAGAGAATATTTCACCATTGAAGGAGCCATGTGTAAGGAATGAGTTGTCATGTACAACAAATTCTGATAGTAACGGATTGCAATATAATGGAGGACTTGGAGGCCATAAAGGATCTGCACCAGGCTTGCCAGTTTCTTCTAGCCCATCATTTTCTTCCAACGTTGCAACAAGGCCCATTAGTACTTCAAGTGTATCCATGAAAATTGTGCAAGGCTTGGTGGCATCTAAAAGTTGTATACAAGCTTCCTCTCGAACTGGAGACAGTAGATCATTGCTTGGTGAGCATCATAACAGATCACCGGCAATGATTCATGATGGAACCAACATGAAGTCCAGTTTGGAAAGCTCAAACAATTCTTGCAGGTTGATTGCATCTGACTATAATGCAACTCCGTGTCATTCATCCAAGGATCAGGTATTAGTAACACCAGGGACTAATGCCTCAGTAGTGACTCTGAAAGATAGCAGCCAGGTCCATAGTGCGTCAAGTCAGCAGTTTGTCAGAACTGGCCCATGGACACAAAGTGCTTCTCATGAAGCATCATCACCTAGTACCTCTGCTTTGAAGCCTTCTTTAGATCCCCCTGCCATGAAAAATCTGTATGGGGGTTTTACTCAAGGCAGTGCCCATCCTGGACCTCCAAGTTTCAGTAATCAGCAACCAAATGATGGGCGTCTTCAAAGAACATCTGAATCTCTACCAGGTGTGGAAGCTAGAGCTAGGGGACATCCAACTGTCACGGCACAGCCTGCACTAGAAATTCACAGCAGGAATGGAGGTGCACAGAAGGGTCCTCGCATAGCCAATGTTGTGCATCGTTTCAAGTGCTCTGTTGAACCTCTCGAAATTGGTGTTGTGCTATCAGGGAGGCTGTGGTCTTCAAGCCAAGCAATCTTCCCGAAAGGGTTTAGAAGCAGAGTGAAATACTTC] [+] EMBL AK121381 [GCTTGTGCCCAACAAGAGGAGAGCAAAATTTCCCCTCGTCGTCAGCTCGCTCGCCTGCGCCACCGCCGACCCCCCATCCATCCCTCCCCGGCGACGGCGACCGGAGCAGAGGGGGGTTAGGCTCGCCGCCGCCGCCGCCGCCGCCGCTTCTGCTGCTTCTCCCGCCGCCCCGCATCGCATCTATCCCGTAATGATGGGGGTTACCACCACGCTCAACGAGGACACTGAACCCTCTATTCCACCTGGATTTGGACCTTTTGCTACCCTTCCGTTATGGGGAATCCACAATGATGCCAAACCTGCTGTTACTCATTCTACTCCTGTTCAAGCATTGCAAAGCATTAGAAAAGACAGCGAAGAATGCCAACCCAGTGCGGCTGTGTCTCGGAGTGATACACCTTGCAGCACTTCCGGAACCCAGACATGCAGAAAATCACTGCGTAACAGACCCCCAATAGACTATAGCCGCTTTGAACATATATCGGATGAAGATTCTGATGTCGAAATAGTGGAAAAGGATGTAAGTTCAACGAGACGCAGACAACAGCTACCGAAAGGAGTACTTCGAGGATGTGCAGAATGCAGTGACTGTCAAAAGGTTATC GCAAAATGGAATCCAGCTGGTGCACGCAGGCCTGTTCTTGATGAGGCTCCTGTTTTCTATCCAACAGAGGAGGAATTTGAAGACACTCTAAAATACATTGAGAGTATACGGCCAATGGCGGAACCATATGGTATTTGCCGTATTGTCCCACCATCTTCTTGGAAGCCTCCATGCCTTCTTAAAGATAAAAGCATATGGGAAGGATCAAAATTCTCTACTCGGGTACAAAAGGTTGACAAGCTCCAAAA CCGTAAATCATCAAAAAAGGGCAGAAGAGGTGGAATGATGAAGAGGAGAAAGCTTGCAGAGTCAGAGGAGAACAGTGCCACTGCTCACACTCAGACAGGGATGCAGCAAAGTCCAGAGAGATTTGGATTTGAACCTGGGCCAGAGTTCACGTTACAGACATTTCAGAAATATGCAGATGATTTCAGTAAGCAGTACTTTAGGAAAGATACATCGATGGATTCAGTACCATCAGTGGAAGATATTGAAGGTGAGTACTGGCGCATCGTTGAGGTTCCCACAGAAGAGATAGAGGTGATATATGGTGCTGATCTGGAGACTGGAACTTTCGGCAGTGGTTTTCCAAAATTATCTCCTGAGACAAAATCTGATGCTGAGGATAAATATGCACAATCTGGTTGGAATCTAAATAACTTGCCTAGACTACAAGGTTCAGTTCTTTCTTTCGAGGGCGGTGACATTTCTGGTGTTCTAGTGCCTTGGGTGTATGTTGGCATGTGTTTTTCATCATTCTGCTGGCATGTTGAAGACCATCATTTATACTCACTAAACTACATGCATTGGGGTGCCCCAAAGTTGTGGTATGGAGTTCCAGGAAAGGATGCTGTGAATTTGGAATCTGCAATGAGGAAACATCTACCTGAATTATTTGAGGAGCAACCTGATTTGCTACACAACCTTGTTACCCAGTTTTCACCATCGCTGCTGAAATCTGAAGGAGTACATGTATACCGTTGTGTTCAGCATGAGGGCGAGTTTGTCTTGACATTCCCAAGGGCGTACCATGCTGGTTTCAATTGTGGCTTCAATTGTGCCGAAGCTGTTAATGTGGCTCCTATTGATTGGTTACCGATTGGACATAATGCTGTAGAGCTTTATCGTGAGCAAGCTAGGAAAATAACCATTTCTCATGATAAGTTGTTGTTGGGGGCTGCAAGAGAAGCAATAAGAGCTCAGTGGGATATCCTATTCCTCAAGAGGAATACTGCTGATAATATGAGGTGGAAGAGTATATGCGGAGCTGATAGCACTATATTCAAGGCTCTTAAGGCACGAATTGAGACAGAGTTGGTGCAAAGGAAAACTCTAGGTGTTCCAGCTCAATCAAGGAAAATGGATGCTGAATTCGATTCCATTGATAGGGAATGTGCCTTGTGCTACTATGATTTACATCTTTCTGCTTCTGGCTGTCCATGCTGCCCAGAGAAATATGCTTGCCTTGTACATGCAAAGCAACTTTGCTCATGTGACTGGGACAAAAGGTTTTTCCTATTCCGCTATGATGTCAATGAGCTAAATATCTTAGCTGATGCTTTAGGGGGGAAATTAAGTGCCATTCATAGATGGGGCGTCTCTGATCTTGGATTAAGTTTGAGTTCATGTGTCAAACGAGAAAAGGTCCAAGATTCCAAGACTGTTCGCAGATTAACTGATGGTCCAAGAAGGTCTTACATGTCACAGGCATCAGCAGTATCCTTGGTTTCTTCTTCTACTTCCAATGAACAGAAAGATGAAGGAAATAAGATCATGAAGATAGCTAGCCCACAGACAAATAATGTGTGCCCTTCTGTCGAGCAAAGGAAATCAGAGAATATTTCACCATTGAAGGAGCCATGTGTAAGGAATGAGTTGTCATGTACAACAAATTCTGATAGTAACGGATTGCAATATAATGGAGGACTTGGAGGCCATAAAGGATCTGCACCAGGCTTGCCAGTTTCTTCTAGCCCATCATTTTCTTCCAACGTTGCAACAAGGCCCATTAGTACTTCAAGTGTATCCATGAAAATTGTGCAAGGCTTGGTGGCATCTAAAAGTTGTATACAAGCTTCCTCTCGAACTGGAGACAGTAGATCATTGCTTGGTGAGCATCATAACAGATCACCGGCAATGATTCATGATGGAACCAACATGAAGTCCAGTTTGGAAAGCTCAAACAATTCTTGCAGGTTGATTGCATCTGACTATAATGCAACTCCGTGTCATTCATCCAAGGATCAGGTATTAGTAACACCAGGGACTAATGCCTCAGTAGTGACTCTGAAAGATAGCAGCCAGGTCCATAGTGCGTCAAGTCAGCAGTTTGTCAGAACTGGCCCATGGACACAAAGTGCTTCTCATGAAGCATCATCACCTAGTACCTCTGCTTTGAAGCCTTCTTTAGATCCCCCTGCCATGAAAAATCTGTATGGGGGTTTTACTCAAGGCAGTGCCCATCCTGGACCTCCAAGTTTCAGTAATCAGCAACCAAATGATGGGCGTCTTCAAAGAACATCTGAATCTCTACCAGGTGTGGAAGCTAGAGCTAGGGGACATCCAACTGTCACGGCACAGCCTGCACTAGAAATTCACAGCAGGAATGGAGGTGCACAGAAGGGTCCTCGCATAGCCAATGTTGTGCATCGTTTCAAGTGCTCTGTTGAACCTCTCGAAATTGGTGTTGTGCTATCAGGGAGGCTGTGGTCTTCAAGCCAAGCAATCTTCCCGAAAGGGTTTAGAAGCAGAGTGAAATACTTC] [+] EMBL AU068240 [ ggCGAAAGGAGTACTTCGAGGATGTGCAGAATGCAGTGACTGTCAAAAGGTTATC GCAAAATGGAATCCAGCTGGTGCACGCAGGCCTGTTCTTGATGAGGCTCCTGTTTTCTATCCAACAGAGGAGGAATTTGAAGACACTCTAAAATACATTGAGAGTATACGGCCAATGGCGGAACCATATGGTATTTGCCGTATTGTCCCACCATCTTCTTGGAAGCCTCCATGCCTTCTTAAAGATAAAAGCATATGGGAAGGATCAAAATTCTCTACTCGGGTACAAAAGGTTGACAAGCTCCAAAA CCGTAAATCATCAAAAAAGGGCAGAAGAGGTGGAATGATGAAGAGGAGAAAGCTTGCAGAGTCAGAGGAGAACAGTGCCACTGCTCACACTCAG ] [+] EMBL AU166465 [ TACTTCGAGGATGTGCAGAATGCAGTGACTGTCAAAAGGTTATCAGCAAAATGGAATCCAGCTGGTGCACGCAGGCCTGTTCTTGATGAGGCTCCTGTTTTCTATCCAACAGAGGAGGAATTTGAAGACACTCTAAAATACATTGAGAGTATACGGCCAATGGCGGAACCATATGGTATTTGCCGTATTGTCCCACCATCTTCTTGGAAGCCTCCATGCCTTCTTAAAGATAAAAGCATATGGGAAGGATCAAAATTCTCTACTCGGGTACAAAAGGTTGACAAGCTCCAAAACCCGTAAATCATCAAAAAAGGGCAGAAGAGGTGGAATGATGAAGAGGAGAAAGCTTGCAGAGTCAGAGGAGAACAGTGCCACTGCTCACACTCAGACAGGGATGCAGCAAAGTCCAGAGAGATTTGGATTTGAACCTGGGCCA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||