cluster # 4167

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Oryza sativa
cluster # 4167 cluster # 4167 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4167#0 length = 1467 sequences # 3
consensusID : consensus_4167#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1467
fasta sequence
                              [CAACACACACACACACATGACACAAGCACACACACCCCTATTCATACACATACTCCATATGTAGCCCTTTCTTGGTTTCTCTCTCTAGCAGCTACTACCCTTCAATTTCCTTAATTCTCTCTCTTCTTGTTCTTCTTCTTCCTCCATATAGCTAGCTAGAGAGAGAGAGAGAGAGAGAGAGAGGAGGTGATCAAGGGGGGGAGGTTGATCGATGTCGATGATGAGCTTCTTGAGCATGGTGGAGGCGGAGCTGCCGCCGGGGTTCAGGTTCCACCCGAGGGACGACGAGCTCATCTGCGACTACCTGGCGCCCAAGGTCGCCGGCAAGGTCGGCTTCTCCGGCCGCCGCCCGCCCATGGTCGACGTCGACCTCAACAAGGTCGAGCCATGGGACCTCCCCGAGGTGGCGTCGGTGGGCGGAAAGGAGTGGTACTTCTTCAGCCTGAGGGACCGAAAATACGCGACGGGGCAGCGTACGAACCGAGCCACGGTTTCGGGGTACTGGAAGGCCACGGGGAAGGACAGGGTGGTGGCACGAAGAGGGGCACTTGTGGGGATGAGGAAGACACTGGTGTTCTACCAGGGGAGGGCACCCAAGGGAAGGAAGACAGAGTGGGTGATGCATGAGTACAGGATGGAGGGTGTGCATGATCAACAAGCTTCCAGCTTCTCCTCCAAGGAAGACTGGGTCCTGTGCAGAGTCATCTGCAAGAGGAAATCAGGAGGGGGTGCAACCTCCAAGTCAAGAAGCCTCACCACCACCACCACCACCATTGTCCATGACACATCCACACCAACCTCCTCACCACCATTGCCACCCCTCATGGACACCACCCTAGCTCAGCTCCAGGCCTCCATGAACACCTCCTCCTCCTCCGCCATCGCCGCCGTCGCCGCACTTGAGCAAGTGCCCTGCTTCTCCAGCTTCAGCAACAGCATTGCCAGTAACAACAACAACAGCAACAGTGCTACTGTCAATGCACAGCAATGCTACCTGCCAATTGTCACAGGTAGCAACAACAATGGCATGAGCTACCTGGATCATGGCCTGCCTGAATTTGGCAGCTTCTTGGACACCCAGAGCTGTGACAAGAAGATGCTCAAGGCAGTGCTGAGCCAGCTCAACTCCATTGGGGGTGAGGTGTTGCCAGGCCTGCCTCCTCCATCTGAAATGGCTGCTGCTGTCAGCCCTTCTTGGATGAATCACTTCTAGGGAAAAATATTATTCAGACAATATAAGAATAGCTAGCTAGCTAGTAGTTGATCTTCAGTGTGTATGATGAATTGATGATTTGATATGGTATACATACTTATTTGTGTGATGGTACAATATTTATGTGTGAGTATTAATAGAGCATGCCATAGTTTTTCTGTAAGGCATAGGAAAATTCAGGACTAAAACTATGTAATGATTGCTAAAGTGTGTATACTCAGAAATCAGAAGTAGAGGTTTGCGTTGTCGAAAAA]

[+] EMBL AK071464             [CAACACACACACACACATGACACAAGCACACACACCCCTATTCATACACATACTCCATATGTAGCCCTTTCTTGGTTTCTCTCTCTAGCAGCTACTACCCTTCAATTTCCTTAATTCTCTCTCTTCTTGTTCTTCTTCTTCCTCCATATAGCTAGCTAGAGAGAGAGAGAGAGAGAGAGAGAGGAGGTGATCAAGGGGGGGAGGTTGATCGATGTCGATGATGAGCTTCTTGAGCATGGTGGAGGCGGAGCTGCCGCCGGGGTTCAGGTTCCACCCGAGGGACGACGAGCTCATCTGCGACTACCTGGCGCCCAAGGTCGCCGGCAAGGTCGGCTTCTCCGGCCGCCGCCCGCCCATGGTCGACGTCGACCTCAACAAGGTCGAGCCATGGGACCTCCCCGAGGTGGCGTCGGTGGGCGGAAAGGAGTGGTACTTCTTCAGCCTGAGGGACCGAAAATACGCGACGGGGCAGCGTACGAACCGAGCCACGGTTTCGGGGTACTGGAAGGCCACGGGGAAGGACAGGGTGGTGGCACGAAGAGGGGCACTTGTGGGGATGAGGAAGACACTGGTGTTCTACCAGGGGAGGGCACCCAAGGGAAGGAAGACAGAGTGGGTGATGCATGAGTACAGGATGGAGGGTGTGCATGATCAACAAGCTTCCAGCTTCTCCTCCAAGGAAGACTGGGTCCTGTGCAGAGTCATCTGCAAGAGGAAATCAGGAGGGGGTGCAACCTCCAAGTCAAGAAGCCTCACCACCACCACCACCACCATTGTCCATGACACATCCACACCAACCTCCTCACCACCATTGCCACCCCTCATGGACACCACCCTAGCTCAGCTCCAGGCCTCCATGAACACCTCCTCCTCCTCCGCCATCGCCGCCGTCGCCGCACTTGAGCAAGTGCCCTGCTTCTCCAGCTTCAGCAACAGCATTGCCAGTAACAACAACAACAGCAACAGTGCTACTGTCAATGCACAGCAATGCTACCTGCCAATTGTCACAGGTAGCAACAACAATGGCATGAGCTACCTGGATCATGGCCTGCCTGAATTTGGCAGCTTCTTGGACACCCAGAGCTGTGACAAGAAGATGCTCAAGGCAGTGCTGAGCCAGCTCAACTCCATTGGGGGTGAGGTGTTGCCAGGCCTGCCTCCTCCATCTGAAATGGCTGCTGCTGTCAGCCCTTCTTGGATGAATCACTTCTAGGGAAAAATATTATTCAGACAATATAAGAATAGCTAGCTAGCTAGTAGTTGATCTTCAGTGTGTATGATGAATTGATGATTTGATATGGTATACATACTTATTTGTGTGATGGTACAATATTTATGTGTGAGTATTAATAGAGCATGCCATAGTTTTTCTGTAAGGCATAGGAAAATTCAGGACTAAAACTATGTAATGATTGCTAAAGTGTGTATACTCAGAAATCAGAAGTAGAGGTTTGCGTTGTCGAAAAA]
[+] EMBL CA755857             [                           ACACACACCCCTATTCATACACATACTCCATATGTAGCCCTTTCTTGGTTTCTCTCTCTAGCAGCTACTACCCTTCAATTTCCTTAATTCTCTCTCTTCTTGTTCTTCTTCTTCCTCCATATAGCTAGCTAGAGAGAGAGAGAGAGAGAGAGAGAGGAGGTGATCAAGGGGGGGAGGTTGATCGATGTCGATGATGAGCTTCTTGAGCATGGTGGAGGCGGAGCTGCCGCCGGGGTTCAGGTTCCACCCGAGGGACGACGAGCTCATCTGCGACTACCTGGCGCCCAAGGTCGCCGGCAAGGTCGGCTTCTCCGGCCGCCGCCCGCCCATGGTCGACGTCGACCTCAACAAGGTCGAGCCATGGGACCTCCCCGAGGTGGCGTCGGTGGGCGGAAAGGAGTGGTACTTCTTCAGCCTGAGGGACCGAAAATACGCGACGGGGCAGCGTACGAACCGAGCCACGGTTTCGGGGTACTGGAAGGCCACGGGGAAGGACAGGGTGGTGGCACGAAGAGGGGCACTTGTGGNGATGAGGAAGACACTGGTGTTCTACCAGGGGAGGGCACCCNAGGGAAGGAAGACAGAGTGGGTGATGCATGAGTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB647365             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CATTGCCAGTAACAACAACAACAGCAACAGTGGTACTGTCAATGCACAGCAATGCTGCCTGCCAATTGTCACAGGTAGCAACAACAATGGCATGAGGTACCTGGATCATGGCCTGCCTGAATTTGGCAGCTTCTTGGACACCCAGAGCTGTGACAAGAAGATGCTCAAGGCAGTGCTGAGCCAGCTCAATTCCATTGGGGGTGAGGTGTTGCCAGGCCTGCCTCCTCCATTTGAAATGGCTGCTGCTGTCAGCTCTTCTTGGATGAATCACTTTTAGGGAAAAATATTATTCAGACAATATAAGAATAGCTAGCTAGCTAGTAGTTGATCTTCAGTGTGTATGATGAATTGATGATTTGATATGGTATACATACTTATTTGTGTGATGGTACAATATTTATGTGTGAGTATTAATAGAGCATGCCATAGTTTTTCTGTAAGGCATAGGAAAATTCAGGACTAAAACTATGTAATGATTGCTAAAGTGTGTATACTCAGAAATCAGAAGTAGAGGTTTGCGTTGTCG     ]




>consensus_4167#0
CAACACACACACACACATGACACAAGCACACACACCCCTATTCATACACATACTCCATAT
GTAGCCCTTTCTTGGTTTCTCTCTCTAGCAGCTACTACCCTTCAATTTCCTTAATTCTCT
CTCTTCTTGTTCTTCTTCTTCCTCCATATAGCTAGCTAGAGAGAGAGAGAGAGAGAGAGA
GAGGAGGTGATCAAGGGGGGGAGGTTGATCGATGTCGATGATGAGCTTCTTGAGCATGGT
GGAGGCGGAGCTGCCGCCGGGGTTCAGGTTCCACCCGAGGGACGACGAGCTCATCTGCGA
CTACCTGGCGCCCAAGGTCGCCGGCAAGGTCGGCTTCTCCGGCCGCCGCCCGCCCATGGT
CGACGTCGACCTCAACAAGGTCGAGCCATGGGACCTCCCCGAGGTGGCGTCGGTGGGCGG
AAAGGAGTGGTACTTCTTCAGCCTGAGGGACCGAAAATACGCGACGGGGCAGCGTACGAA
CCGAGCCACGGTTTCGGGGTACTGGAAGGCCACGGGGAAGGACAGGGTGGTGGCACGAAG
AGGGGCACTTGTGGGGATGAGGAAGACACTGGTGTTCTACCAGGGGAGGGCACCCAAGGG
AAGGAAGACAGAGTGGGTGATGCATGAGTACAGGATGGAGGGTGTGCATGATCAACAAGC
TTCCAGCTTCTCCTCCAAGGAAGACTGGGTCCTGTGCAGAGTCATCTGCAAGAGGAAATC
AGGAGGGGGTGCAACCTCCAAGTCAAGAAGCCTCACCACCACCACCACCACCATTGTCCA
TGACACATCCACACCAACCTCCTCACCACCATTGCCACCCCTCATGGACACCACCCTAGC
TCAGCTCCAGGCCTCCATGAACACCTCCTCCTCCTCCGCCATCGCCGCCGTCGCCGCACT
TGAGCAAGTGCCCTGCTTCTCCAGCTTCAGCAACAGCATTGCCAGTAACAACAACAACAG
CAACAGTGCTACTGTCAATGCACAGCAATGCTACCTGCCAATTGTCACAGGTAGCAACAA
CAATGGCATGAGCTACCTGGATCATGGCCTGCCTGAATTTGGCAGCTTCTTGGACACCCA
GAGCTGTGACAAGAAGATGCTCAAGGCAGTGCTGAGCCAGCTCAACTCCATTGGGGGTGA
GGTGTTGCCAGGCCTGCCTCCTCCATCTGAAATGGCTGCTGCTGTCAGCCCTTCTTGGAT
GAATCACTTCTAGGGAAAAATATTATTCAGACAATATAAGAATAGCTAGCTAGCTAGTAG
TTGATCTTCAGTGTGTATGATGAATTGATGATTTGATATGGTATACATACTTATTTGTGT
GATGGTACAATATTTATGTGTGAGTATTAATAGAGCATGCCATAGTTTTTCTGTAAGGCA
TAGGAAAATTCAGGACTAAAACTATGTAATGATTGCTAAAGTGTGTATACTCAGAAATCA
GAAGTAGAGGTTTGCGTTGTCGAAAAA
clustalw multiple alignements is not computed in this case