cluster # 4168

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Oryza sativa
cluster # 4168 cluster # 4168 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4168#0 length = 676 sequences # 3

consensusID : consensus_4168#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 676
fasta sequence

                              [TGTTCGATCTTTGCTTTCATCAATCCACCTTGTTTGATCTCTGCTCTGAGTTCTGAAGAAACTGTGGTCGATCGGCGATCGGATCGATCGGGATCGATGTCGAGCCTGGTAGACATTTGGACGGTGGAACGGGAGAGGATCCGGGTCAGCGGCGCGCAGGCGTTCAGGACGACGGTGGCTTCGAAGCGAGGCTGCACGGCTCGTTCTGACGACGGCCAGAACAAGCCTGACGGCGCGGCCGTGGAAACGGCTGCCAAGAAGCAGCAGGCCGCTGCCGTTGGTGGCGCGCCGGCGAGCGTGATCCAAGAAGACGCTTTCTTGTCCATCCTGATCGATTGCTTCGGCCAGTAGAGTAGGCTTAGCTTGGCGTTACAGGGCACTCTCTCCATCGTAAAATAGCTACTATACCTTTAGCTATGAATCTGAACCTGGTGATTTCGACGGTCTCGTGTGATTTTTGTGTAAATCTTCTGAAATATCACTGCAGTACTGTCTGAATCCTGGAAGTCTCTGTAGCGAAAGCCCACTTTTCTTCAATCGAGATATGATGGTTTAGCGGGTTCGAAGTACACGATCATGAGACGATTCGAGTGAAGGGGATTCTATAATTCATCGCCACCACTCGGTTAAATCAGATATTTTCATCTTTTTCTTGTAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AB054528             [TGTTCGATCTTTGCTTTCATCAATCCACCTTGTTTGATCTCTGCTCTGAGTTCTGAAGAAACTGTGGTCGATCGGCGATCGGATCGATCGGGATCGATGTCGAGCCTGGTAGACATTTGGACGGTGGAACGGGAGAGGATCCGGGTCAGCGGCGCGCAGGCGTTCCGGACGACGGTGGCTTCGAAGCGAGGCTGCACGGCTCGTTCTGACGACGGCCAGAACAAGCCTGACGGCGCGGCCGTGGAAACGGCTGCCAAGAAGCAGCAGGCCGCTGCCGTTGGTGGCGCGCCGGCGAGCGTGATCCAAGAAGACGCTTTCTTGTCCATCCTGATCGATTGCTTCGGCCAGTAGAGTAGGCTTAGCTTGGCGTTACAGGGCACTCTCTCCATCGTAAAATAGCTACTATACCTTTAGCTATGAATCTGAACCTGGTGATTTCGACGGTCTCGTGTGATTTTTGTGTAAATCTTCTGAAATATCACTGCAGTGCTGTCTGAATCCTGGAAGTCTCTGTAGCGAAAGCCCACTTTTCTTCAATCGAGATATGATGGTTTAGCGGGTTCGAAGTACACGATCATGAGACGATTCGAGTGAAGGGGATTCTATAATTCATCGCCACCACTCGGTTAAATCAGATATTTTCATCTTTTTCTTGTAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK121417             [  TTCGATCTTTGCTTTCATCAATCCACCTTGTTTGATCTCTGCTCTGAGTTCTGAAGAAACTGTGGTCGATCGGCGATCGGATCGATCGGGATCGATGTCGAGCCTGGTAGACATTTGGACGGTGGAACGGGAGAGGATCCGGGTCAGCGGCGCGCAGGCGTTCAGGACGACGGTGGCTTCGAAGCGAGGCTGCACGGCTCGTTCTGACGACGGCCAGAACAAGCCTGACGGCGCGGCCGTGGAAACGGCTGCCAAGAAGCAGCAGGCCGCTGCCGTTGGTGGCGCGCCGGCGAGCGTGATCCAAGAAGACGCTTTCTTGTCCATCCTGATCGATTGCTTCGGCCAGTAGAGTAGGCTTAGCTTGGCGTTACAGGGCACTCTCTCCATCGTAAAATAGCTACTATACCTTTAGCTATGAATCTGAACCTGGTGATTTCGACGGTCTCGTGTGATTTTTGTGTAAATCTTCTGAAATATCACTGCAGTACTGTCTGAATCCTGGAAGTCTCTGTAGCGAAAGCCCACTTTTCTTCAATCGAGATATGATGGTTTAGCGGGTTCGAAGTACAC                                                                                                        ]
[+] EMBL AK063832             [   TCGATCTTTGCTTTCATCAATCCACCTTGTTTGATCTCTGCTCTGAGTTCTGAAGAAACTGTGGTCGATCGGCGATCGGATCGATCGGGATCGATGTCGAGCCTGGTAGACATTTGGACGGTGGAACGGGAGAGGATCCGGGTCAGCGGCGCGCAGGCGTTCAGGACGACGGTGGCTTCGAAGCGAGGCTGCACGGCTCGTTCTGACGACGGCCAGAACAAGCCTGACGGCGCGGCCGTGGAAACGGCTGCCAAGAAGCAGCAGGCCGCTGCCGTTGGTGGCGCGCCGGCGAGCGTGATCCAAGAAGACGCTTTCTTGTCCATCCTGATCGATTGCTTCGGCCAGTAGAGTAGGCTTAGCTTGGCGTTACAGGGCACTCTCTCCATCGTAAAATAGCTACTATACCTTTAGCTATGAATCTGAACCTGGTGATTTCGACGGTCTCGTGTGATTTTTGTGTAAATCTTCTGAAATATCACTGCAGTACTGTCTGAATCCTGGAAGTCTCTGTAGCGAAAGCCCACTTTTCTTCAATCGAGATATGATGGTTTAGCGGGTTCGAAGTACACGATCATGAGACGATTCGAGTGAAGGGGATTCTATAATTCATCGCCACCACTCGGTTAAATCAGATATTTTCATCTTTTTCTTGAAAAccagata          ]




>consensus_4168#0
TGTTCGATCTTTGCTTTCATCAATCCACCTTGTTTGATCTCTGCTCTGAGTTCTGAAGAA
ACTGTGGTCGATCGGCGATCGGATCGATCGGGATCGATGTCGAGCCTGGTAGACATTTGG
ACGGTGGAACGGGAGAGGATCCGGGTCAGCGGCGCGCAGGCGTTCAGGACGACGGTGGCT
TCGAAGCGAGGCTGCACGGCTCGTTCTGACGACGGCCAGAACAAGCCTGACGGCGCGGCC
GTGGAAACGGCTGCCAAGAAGCAGCAGGCCGCTGCCGTTGGTGGCGCGCCGGCGAGCGTG
ATCCAAGAAGACGCTTTCTTGTCCATCCTGATCGATTGCTTCGGCCAGTAGAGTAGGCTT
AGCTTGGCGTTACAGGGCACTCTCTCCATCGTAAAATAGCTACTATACCTTTAGCTATGA
ATCTGAACCTGGTGATTTCGACGGTCTCGTGTGATTTTTGTGTAAATCTTCTGAAATATC
ACTGCAGTACTGTCTGAATCCTGGAAGTCTCTGTAGCGAAAGCCCACTTTTCTTCAATCG
AGATATGATGGTTTAGCGGGTTCGAAGTACACGATCATGAGACGATTCGAGTGAAGGGGA
TTCTATAATTCATCGCCACCACTCGGTTAAATCAGATATTTTCATCTTTTTCTTGTAAAA
AAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case