cluster # 4188

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Oryza sativa
cluster # 4188 cluster # 4188 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4188#0 length = 1151 sequences # 3
consensusID : consensus_4188#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1151
fasta sequence
                              [AACGCGCGCGCCAGAGCTAGGTGGTTAGCCCAAGCTCGCGAGATCGATCGCTACTATAGGCTAAGGACACGTACATGGCGCAGCTCCCGCCCAAGATCCCGGTGGCGGCGCCGGGGCACCACCAGCACTGGGCCTCGGCCGGGGGCGCCGGCGACGCGGCGTGGGCGGATGAGTTCGCCGAGTTCGCGGCGTCGCGGCGGGGCGCGCACCGCCGGTCGCTGAGCGACTCCGTGGCGTTCGTCGAGGTGGCGCCGGCGGGGTGCGGGGCGGGCGGCGAGTTCGACAGGCTCGACGACGACCAGCTCATGTCTATGTTCCCCGACGAGGGCGGGTCGTCGGCCCCGGGGTCCGACAACGGCGGCAGCGACAGCGACGGCGGCGGCGACAAGCACGCCGCGGCGCAGAGCGACGACGGGCAGCACGCCGCCGGGGAGCCGACGCAGGAGCAGGCGGCGGCCACCTCGCCGACGGAGCTGATCCGGGACCCCAAGAGGGTCAAGAGGATACTGGCTAATCGGCAGTCGGCCCAGAGGTCGCGAGTGAGGAAGCTTCAATACATCTCCGAGCTCGAGCGCAGCGTCACAACCCTGCAGAACGAGGTATCCGTGCTGTCCCCTCGGGTGGCGTTTCTGGATCAGCAGCGGACGATCCTGACCGTCGGCAACAGCCACCTCAAGCAGCGGATCGCGGCTCTAGCACAGGACAAGATTTTCAAGGATGCTCATCAGGAGGCGTTGAGGAAGGAGATCGAGAGGCTGAGGCAGGTATACCAGCAGCAGAACACCAAGTTGTCCGGTGGTCTGGCCGCTGACCACGCACATGTCCATGGCGGCCCGCCGCCTGTGCGAGCAGAGAAGGAGCTCATGAGCTAGCTGATCAATTTGCCTACTGTCCCCTGTGCAGTCTGCCTTAGCATTAACTTTGGAGGGAACATTGCATCATGAACCTGTGGATGTTTTCTTCTTCTTC-TTTTTTTTTGTTTTTTTATTCTTTTACATTGACTTGTGTATTCTTGATTCGGTTGTTGATTGGAGTTCTGGTTTACAATGGGAATTGTGGGAGATGTCAATAAGAAAATGTGAACTGCAATAAGATTAACTGTGATTTTTGAAAGCCNNAATTAATAATAATAAAAATATTTAAATTTAATT]

[+] EMBL AK108553             [AACGCGCGCGCCAGAGCTAGGTGGTTAGCCCAAGCTCGCGAGATCGATCGCTACTATAGGCTAAGGACACGTACATGGCGCAGCTCCCGCCCAAGATCCCGGTGGCGGCGCCGGGGCACCACCAGCACTGGGCCTCGGCCGGGGGCGCCGGCGACGCGGCGTGGGCGGATGAGTTCGCCGAGTTCGCGGCGTCGCGGCGGGGCGCGCACCGCCGGTCGCTGAGCGACTCCGTGGCGTTCGTCGAGGTGGCGCCGGCGGGGTGCGGGGCGGGCGGCGAGTTCGACAGGCTCGACGACGACCAGCTCATGTCTATGTTCCCCGACGAGGGCGGGTCGTCGGCCCCGGGGTCCGACAACGGCGGCAGCGACAGCGACGGCGGCGGCGACAAGCACGCCGCGGCGCAGAGCGACGACGGGCAGCACGCCGCCGGGGAGCCGACGCAGGAGCAGGCGGCGGCCACCTCGCCGACGGAGCTGATCCGGGACCCCAAGAGGGTCAAGAGGATACTGGCTAATCGGCAGTCGGCCCAGAGGTCGCGAGTGAGGAAGCTTCAATACATCTCCGAGCTCGAGCGCAGCGTCACAACCCTGCAGAACGAGGTATCCGTGCTGTCCCCTCGGGTGGCGTTTCTGGATCAGTAGCGGACGATCCTGACCGTCGGCAACAGCCACCTCAAGCAGCGGATCGCGGCTCTAGCACAGGACAAGATTTTCAAGGATGCTCATCAGGAGGCGTTGAGGAAGGAGATCGAGAGGCTGAGGCAGGTATACCAGCAGCAGAACACCAAGTTGTCCGGTGGTCTGGCCGCTGACCACGCACATGTCCATGGCGGCCCGCCGCCTGTGCGAGCAGAGAAGGAGCTCATGAGCTAGCTGATCAATTTGCCTACTGTCCCCTGTGCAGTCTGCCTTAGCATTAACTTTGGAGGGAACATTGCATCATGAACCTGTGGATGTTTTCTTCTTCTTC  TTCTTTTTGTTTTTTTATTCTTTTACATTGACTTGTGTATTCTTGATTCGGATGTTGATTGGAGTTCTGGTTTACAATGGGAATTGTGGGAGATGTCAATAAGAAAATGTGAACTGCAATAAG                                                          ]
[+] EMBL BE039847             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGTTTCTGGATCAGCAGCGGACGATCCTGACCGTCGGCAACAGCCACCTCAAGCAGCGGATCGCGGCTCTAGCACAGGACAAGATTTTCAAGGATGCTCATCAGGAGGCGTTGAGGAAGGAGATCGAGAGGCTGAGGCAGGTATACCAGCAGCAGAACACCAAGTTGTCCGGTGGTCTGGCCGCTGACCACGCACATGTCCATGGCGGCCCGCCGCCTGTGCGAGCAGAGAAGGAGCTCATGAGCTAGCTGATCAATTTGCCTACTGTCCCCTGTGCAGTCTGCCTTAGCATTAACTTTGGAGGGAACATTGCATCATGAACCTGTGGATGTTTTCTTCTTCTTCTTTTTTTTTTGTTTTTTTATTCTTTTACATTGACTTGTGTATTCTTGATTCGGTTGTTGATTGGAGTTCTGGTTTACAATGGGAATTGTGGGAGATGTCAATAAGAAAATGTGAACTGCAATAAGATTAACTGTGATTTTTGAAAGCCNNAATTAATAATAATAAAAATATTTAAATTTAATT]
[+] EMBL CA756602             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGTTTCTGGATCAGCAGCGGACGATCCTGACCGTCGGCAACAGCCACCTCAAGCAGCGGATCGCGGCTCTAGCACAGGACAAGATTTTCAAGGATGCTCATCAGGAGGCGTTGAGGAAGGAGATCGAGAGGCTGAGGCAGGTATACCAGCAGCAGAACACCAAGTTGTCCGGTGGTCTGGCCGCTGACCACGCACATGTCCATGGCGGCCCGCCGCCTGTGCGAGCAGAGAAGGAGCTCATGAGCTAGCTGATCAATTTGCCTACTGTCCCCTGTGCAGTCTGCCTTAGCATTAACTTTGGAGGGAACATTGCATCATGAACCTGTGGATGTTTTCTTCTTCTTC TTTTTTTTTGTTTTTTTATTCTTTTACATTGACTTGTGTATTCTTGATTCGGTTGTTGATTGGAGTTCTGGTTTACAATGGGAATTGTGGGAGATGTCAATAAGAAAATGTGAACTGCAATAAGATTAACTGTGATTTTTGAAAGCCNNAATTAATAATAATAAAAATATTTAAATTTAATT]




>consensus_4188#0
AACGCGCGCGCCAGAGCTAGGTGGTTAGCCCAAGCTCGCGAGATCGATCGCTACTATAGG
CTAAGGACACGTACATGGCGCAGCTCCCGCCCAAGATCCCGGTGGCGGCGCCGGGGCACC
ACCAGCACTGGGCCTCGGCCGGGGGCGCCGGCGACGCGGCGTGGGCGGATGAGTTCGCCG
AGTTCGCGGCGTCGCGGCGGGGCGCGCACCGCCGGTCGCTGAGCGACTCCGTGGCGTTCG
TCGAGGTGGCGCCGGCGGGGTGCGGGGCGGGCGGCGAGTTCGACAGGCTCGACGACGACC
AGCTCATGTCTATGTTCCCCGACGAGGGCGGGTCGTCGGCCCCGGGGTCCGACAACGGCG
GCAGCGACAGCGACGGCGGCGGCGACAAGCACGCCGCGGCGCAGAGCGACGACGGGCAGC
ACGCCGCCGGGGAGCCGACGCAGGAGCAGGCGGCGGCCACCTCGCCGACGGAGCTGATCC
GGGACCCCAAGAGGGTCAAGAGGATACTGGCTAATCGGCAGTCGGCCCAGAGGTCGCGAG
TGAGGAAGCTTCAATACATCTCCGAGCTCGAGCGCAGCGTCACAACCCTGCAGAACGAGG
TATCCGTGCTGTCCCCTCGGGTGGCGTTTCTGGATCAGCAGCGGACGATCCTGACCGTCG
GCAACAGCCACCTCAAGCAGCGGATCGCGGCTCTAGCACAGGACAAGATTTTCAAGGATG
CTCATCAGGAGGCGTTGAGGAAGGAGATCGAGAGGCTGAGGCAGGTATACCAGCAGCAGA
ACACCAAGTTGTCCGGTGGTCTGGCCGCTGACCACGCACATGTCCATGGCGGCCCGCCGC
CTGTGCGAGCAGAGAAGGAGCTCATGAGCTAGCTGATCAATTTGCCTACTGTCCCCTGTG
CAGTCTGCCTTAGCATTAACTTTGGAGGGAACATTGCATCATGAACCTGTGGATGTTTTC
TTCTTCTTCTTTTTTTTTGTTTTTTTATTCTTTTACATTGACTTGTGTATTCTTGATTCG
GTTGTTGATTGGAGTTCTGGTTTACAATGGGAATTGTGGGAGATGTCAATAAGAAAATGT
GAACTGCAATAAGATTAACTGTGATTTTTGAAAGCCNNAATTAATAATAATAAAAATATT
TAAATTTAATT
clustalw multiple alignements is not computed in this case