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Oryza sativa
cluster # 4209 cluster # 4209       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4209#0 length = 2463 sequences # 2  
 consensus_4209#1 length = 2045 sequences # 1  
consensusID : consensus_4209#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2463
fasta sequence 
                              [CCTTCCTCTCACAAGTCTCCTCTTCTTCTACGTACTCCTCTCCTTCCCCCGCGCAGCCGTACACGACTCCCGATGAGATGACGGCCACCGCCGCCGTCGTCGCCGCCCGCCTCATCCAATGACCCCGCTCCTCCTCCTCCTCCTCCTCCCCCTTCTCCTCCTCGCCCCGGCCTCCGCCTCCACCGTCGCCATCGCCGCCGGCCCCACCGCCTGCGCCGTCGCGGAGGGAAACCTCCACCGTCTACTGCGCCTCCGCCACCAACTCGTCCTCCTCCGCCGCCGTCGCGCCGTTCGTCAGCTTCTCCCAGGTGTCCGGCGGCGGGGGGGCGTTCGTCTGCGGGCTGCAGGTCGGGGGGCGCGCGCTCTTCTGCTGGCCCGCCGCGGCGCCGGGTCAGCTCAGGCGGGTGTACAACGGCCCGGGCCAGCTGTCACAGCTCGCCGTCGGGGGCGGCCATGTCGCGGCGTACGACGCCGCGGCGCGGGTGATACGGTGGTGGCGTGGCGGGGACCGGTTCCCTCTCTGGTTCGGCGGTGGGTTCGCCTCCCTCGTCTCCGGCGACGACTTCACCTGCGCCGTGGAGACGAGCACCTCCGCCGTCCGGTGCTGGGGCCCGCGCGGCGGCGCCGTGGAGGCGGGTTTTCTCAACGCCTCCGTCTCCGCCCTCGCCGCGGGAGGTTCCCGCGCGTGCGGGGTGAGGAGGAACGACGGCGGCGTGCTCTGCTCCGGCGGTGGCGTGCTCGCGCCGCGCGAGGACCTGTACGTGGACGGCCTGGCCGTCGGCGACTCCCACGCGTGCGGCCTCCTCCGGCCGAACCACACCGCCGCGTGCTGGAGCCTCGGGGGCGCCACCACCACGCTCTACTACCCGGCGGTCGGCACGGCGTTCGAGCTCCTCGTCGCCGGCGGTAACCTCACGTGCGGCCTCGTGTCGGCCAACTTCAGCCTGCTCTGCTGGTCGAGGGATGGGTTGGTGGCGGCGGAGGTGAACCTGCCGCCGATCCTCCCCGGCGTCTGCGTCTCCGACAACAGCTCGTGCAAATGCGGCCCGCTCCCGGACTCCGGGAGGTTCTGCAAGGTCTCCGGCGGCGCCGCCGCAGCTGTCGGCAGTGGCGCGCCGAGCCCGTACGGGTCGCCGAACGGGTCGCTCGGCCGCCTGCGGCGGCAGCTGTCGCGCGTGATGACGCGGCAGCGGAGCGGGCCGTCGTCGTTCAAGGACCCCGCCGAGGAGTTCACCTTCGCGCAGCTCGCGGCGGCGACCAAGGACTTCGCGGCGGAGGCCAAGATCGGGGAGGGGAGCTTCGGGACGGTGTACCGCGGCAAGCTCCCCGACGGGCGGGAGGTGGCCATCAAGCGCGGCGAGTCGGGGCCGCGCGCGCGCAAGTTCCAGGAGAAGGAGACGGCGTTCCGGTCGGAGCTGGCCTTCCTCTCGCGGCTCCACCACAAGCACCTCGTCGGCTTCGTCGGCTACTGCGAGGAGAGCGACGAGCGGCTGCTGGTCTACGAGTACATGAAGAACGGCGCGCTCTACGACCACCTCCACCCCAAGCCCAACGGCTCGTCCTCGCCGTCCCCGTCGCCGGTGGCCACGTCGTGGAAGCTGCGCATCAAGATCCTGCTCGACGCGTCGCGCGGCATCGACTACCTCCACTCGTACGCCGTGCCGCCGATCATCCACCGCGACATCAAGTCGTCGAACATCCTGCTCGACGGCAGCTGGGTGGCGCGCGTGTCGGACTTCGGGCTGTCGCTGATGGGGCCGGAGACGGAGGAGGTGAAGCACCTGTCGATGAAGGCCGCCGGGACGGTGGGGTACATGGACCCGGAGTACTACGGCCTCCACCACCTCACCGTCAAGAGCGACGTCTACGGCTTCGGCGTCGTCATGCTCGAGGCGCTCACCGGGAAGCGCGCCATCTTCAAGGAGGCCGAGGGCGGGAGCCCCGTCAGCGTGGTGGACTACGCAGTCCCCAGCATCGTCGCCGGCGAGCTCAGCAAGGTGCTCGACGCCCGCGCGCCGGAGCCGAGCGCGCACGAGGCCGAGGCCGTCGAGCTGGTCGCCTACACGGCGGTGCACTGCGTCCGGCTGGAGGGGAAGGACCGGCCGGCGATGGCGGACATCGTGGCCAACCTCGAGACGGCGGTGGCGCTCTGCGAGGACAGCGCCACCGGCGGCGGCGCCGCCGGCCATGGCAACAGCTCGTCCAGCGCCAGCCTCTCCATCACGTCCATGGAG-TTGAGTAGGATGGATTGATTGAGATTAGTAGCTTCCCTAATTCAAATCCAGAGTTTCAAATTGTGATTAGCCCCGGAAGGAGATTTTAAAATTTGTTGCTTCACTTCATTTTTTTTTAGAGGAGAACATCATTTGTGTGATTCTCTCACACATTTTGTTCATGGTGGCTGTACATGATTTTGTATTGAACTGATTTCTCTTTTCATAGATGAGAAAATTTCTCTCTTTT]

[+] EMBL AK121766             [CCTTCCTCTCACAAGTCTCCTCTTCTTCTACGTACTCCTCTCCTTCCCCCGCGCAGCCGTACACGACTCCCGATGAGATGACGGCCACCGCCGCCGTCGTCGCCGCCCGCCTCATCCAATGACCCCGCTCCTCCTCCTCCTCCTCCTCCCCCTTCTCCTCCTCGCCCCGGCCTCCGCCTCCACCGTCGCCATCGCCGCCGGCCCCACCGCCTGCGCCGTCGCGGAGGGAAACCTCCACCGTCTACTGCGCCTCCGCCACCAACTCGTCCTCCTCCGCCGCCGTCGCGCCGTTCGTCAGCTTCTCCCAGGTGTCCGGCGGCGGGGGGGCGTTCGTCTGCGGGCTGCAGGTCGGGGGGCGCGCGCTCTTCTGCTGGCCCGCCGCGGCGCCGGGTCAGCTCAGGCGGGTGTACAACGGCCCGGGCCAGCTGTCACAGCTCGCCGTCGGGGGCGGCCATGTCGCGGCGTACGACGCCGCGGCGCGGGTGATACGGTGGTGGCGTGGCGGGGACCGGTTCCCTCTCTGGTTCGGCGGTGGGTTCGCCTCCCTCGTCTCCGGCGACGACTTCACCTGCGCCGTGGAGACGAGCACCTCCGCCGTCCGGTGCTGGGGCCCGCGCGGCGGCGCCGTGGAGGCGGGTTTTCTCAACGCCTCCGTCTCCGCCCTCGCCGCGGGAGGTTCCCGCGCGTGCGGGGTGAGGAGGAACGACGGCGGCGTGCTCTGCTCCGGCGGTGGCGTGCTCGCGCCGCGCGAGGACCTGTACGTGGACGGCCTGGCCGTCGGCGACTCCCACGCGTGCGGCCTCCTCCGGCCGAACCACACCGCCGCGTGCTGGAGCCTCGGGGGCGCCACCACCACGCTCTACTACCCGGCGGTCGGCACGGCGTTCGAGCTCCTCGTCGCCGGCGGTAACCTCACGTGCGGCCTCGTGTCGGCCAACTTCAGCCTGCTCTGCTGGTCGAGGGATGGGTTGGTGGCGGCGGAGGTGAACCTGCCGCCGATCCTCCCCGGCGTCTGCGTCTCCGACAACAGCTCGTGCAAATGCGGCCCGCTCCCGGACTCCGGGAGGTTCTGCAAGGTCTCCGGCGGCGCCGCCGCAGCTGTCGGCAGTGGCGCGCCGAGCCCGTACGGGTCGCCGAACGGGTCGCTCGGCCGCCTGCGGCGGCAGCTGTCGCGCGTGATGACGCGGCAGCGGAGCGGGCCGTCGTCGTTCAAGGACCCCGCCGAGGAGTTCACCTTCGCGCAGCTCGCGGCGGCGACCAAGGACTTCGCGGCGGAGGCCAAGATCGGGGAGGGGAGCTTCGGGACGGTGTACCGCGGCAAGCTCCCCGACGGGCGGGAGGTGGCCATCAAGCGCGGCGAGTCGGGGCCGCGCGCGCGCAAGTTCCAGGAGAAGGAGACGGCGTTCCGGTCGGAGCTGGCCTTCCTCTCGCGGCTCCACCACAAGCACCTCGTCGGCTTCGTCGGCTACTGCGAGGAGAGCGACGAGCGGCTGCTGGTCTACGAGTACATGAAGAACGGCGCGCTCTACGACCACCTCCACCCCAAGCCCAACGGCTCGTCCTCGCCGTCCCCGTCGCCGGTGGCCACGTCGTGGAAGCTGCGCATCAAGATCCTGCTCGACGCGTCGCGCGGCATCGACTACCTCCACTCGTACGCCGTGCCGCCGATCATCCACCGCGACATCAAGTCGTCGAACATCCTGCTCGACGGCAGCTGGGTGGCGCGCGTGTCGGACTTCGGGCTGTCGCTGATGGGGCCGGAGACGGAGGAGGTGAAGCACCTGTCGATGAAGGCCGCCGGGACGGTGGGGTACATGGACCCGGAGTACTACGGCCTCCACCACCTCACCGTCAAGAGCGACGTCTACGGCTTCGGCGTCGTCATGCTCGAGGCGCTCACCGGGAAGCGCGCCATCTTCAAGGAGGCCGAGGGCGGGAGCCCCGTCAGCGTGGTGGACTACGCAGTCCCCAGCATCGTCGCCGGCGAGCTCAGCAAGGTGCTCGACGCCCGCGCGCCGGAGCCGAGCGCGCACGAGGCCGAGGCCGTCGAGCTGGTCGCCTACACGGCGGTGCACTGCGTCCGGCTGGAGGGGAAGGACCGGCCGGCGATGGCGGACATCGTGGCCAACCTCGAGACGGCGGTGGCGCTCTGCGAGGACAGCGCCACCGGCGGCGGCGCCGCCGGCCATGGCAACAGCTCGTCCAGCGCCAGCCTCTCCATCACGTCCATGGAG TTGAGTAGGATGGATTGATTGAGATTAGTAGCTTCCCTAATTCAAATCCAGAGTTTCAAATTGTGATTAGCCCCGGAAGGAGATTTTAAAATTTGTTGCTTCACTTCATTTTTTTTTAGAGGAGAACATCATTTGTGTGATTCTCTCACACATTTTGTTCATGGTGGCTGTACATGATTTTGTATTGAACTGATTTCTCTTTTCATAGATGAGAAAATTTCTCTCTTTT]
[+] EMBL BI812039             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATCACGTCCATGGAGTTTGAGTAGGATGGATTGATTGAGATTAGTAGCTTCCCTAATTCGAATCCAGAGTTTCAAATTGTGATTAGCCCCGGAAGGAGATTTTAAAATTTGTTGCTTCACTTCA TTTTTTTTAGAGGAGAACATCATTTGTGTGATTCTCTCACACATTTTGTTCATGGTGGCTGTACATGATTTTGTATTGAACTGATTTCTCTTTTCATAAAAAAAAAA             ]




>consensus_4209#0
CCTTCCTCTCACAAGTCTCCTCTTCTTCTACGTACTCCTCTCCTTCCCCCGCGCAGCCGT
ACACGACTCCCGATGAGATGACGGCCACCGCCGCCGTCGTCGCCGCCCGCCTCATCCAAT
GACCCCGCTCCTCCTCCTCCTCCTCCTCCCCCTTCTCCTCCTCGCCCCGGCCTCCGCCTC
CACCGTCGCCATCGCCGCCGGCCCCACCGCCTGCGCCGTCGCGGAGGGAAACCTCCACCG
TCTACTGCGCCTCCGCCACCAACTCGTCCTCCTCCGCCGCCGTCGCGCCGTTCGTCAGCT
TCTCCCAGGTGTCCGGCGGCGGGGGGGCGTTCGTCTGCGGGCTGCAGGTCGGGGGGCGCG
CGCTCTTCTGCTGGCCCGCCGCGGCGCCGGGTCAGCTCAGGCGGGTGTACAACGGCCCGG
GCCAGCTGTCACAGCTCGCCGTCGGGGGCGGCCATGTCGCGGCGTACGACGCCGCGGCGC
GGGTGATACGGTGGTGGCGTGGCGGGGACCGGTTCCCTCTCTGGTTCGGCGGTGGGTTCG
CCTCCCTCGTCTCCGGCGACGACTTCACCTGCGCCGTGGAGACGAGCACCTCCGCCGTCC
GGTGCTGGGGCCCGCGCGGCGGCGCCGTGGAGGCGGGTTTTCTCAACGCCTCCGTCTCCG
CCCTCGCCGCGGGAGGTTCCCGCGCGTGCGGGGTGAGGAGGAACGACGGCGGCGTGCTCT
GCTCCGGCGGTGGCGTGCTCGCGCCGCGCGAGGACCTGTACGTGGACGGCCTGGCCGTCG
GCGACTCCCACGCGTGCGGCCTCCTCCGGCCGAACCACACCGCCGCGTGCTGGAGCCTCG
GGGGCGCCACCACCACGCTCTACTACCCGGCGGTCGGCACGGCGTTCGAGCTCCTCGTCG
CCGGCGGTAACCTCACGTGCGGCCTCGTGTCGGCCAACTTCAGCCTGCTCTGCTGGTCGA
GGGATGGGTTGGTGGCGGCGGAGGTGAACCTGCCGCCGATCCTCCCCGGCGTCTGCGTCT
CCGACAACAGCTCGTGCAAATGCGGCCCGCTCCCGGACTCCGGGAGGTTCTGCAAGGTCT
CCGGCGGCGCCGCCGCAGCTGTCGGCAGTGGCGCGCCGAGCCCGTACGGGTCGCCGAACG
GGTCGCTCGGCCGCCTGCGGCGGCAGCTGTCGCGCGTGATGACGCGGCAGCGGAGCGGGC
CGTCGTCGTTCAAGGACCCCGCCGAGGAGTTCACCTTCGCGCAGCTCGCGGCGGCGACCA
AGGACTTCGCGGCGGAGGCCAAGATCGGGGAGGGGAGCTTCGGGACGGTGTACCGCGGCA
AGCTCCCCGACGGGCGGGAGGTGGCCATCAAGCGCGGCGAGTCGGGGCCGCGCGCGCGCA
AGTTCCAGGAGAAGGAGACGGCGTTCCGGTCGGAGCTGGCCTTCCTCTCGCGGCTCCACC
ACAAGCACCTCGTCGGCTTCGTCGGCTACTGCGAGGAGAGCGACGAGCGGCTGCTGGTCT
ACGAGTACATGAAGAACGGCGCGCTCTACGACCACCTCCACCCCAAGCCCAACGGCTCGT
CCTCGCCGTCCCCGTCGCCGGTGGCCACGTCGTGGAAGCTGCGCATCAAGATCCTGCTCG
ACGCGTCGCGCGGCATCGACTACCTCCACTCGTACGCCGTGCCGCCGATCATCCACCGCG
ACATCAAGTCGTCGAACATCCTGCTCGACGGCAGCTGGGTGGCGCGCGTGTCGGACTTCG
GGCTGTCGCTGATGGGGCCGGAGACGGAGGAGGTGAAGCACCTGTCGATGAAGGCCGCCG
GGACGGTGGGGTACATGGACCCGGAGTACTACGGCCTCCACCACCTCACCGTCAAGAGCG
ACGTCTACGGCTTCGGCGTCGTCATGCTCGAGGCGCTCACCGGGAAGCGCGCCATCTTCA
AGGAGGCCGAGGGCGGGAGCCCCGTCAGCGTGGTGGACTACGCAGTCCCCAGCATCGTCG
CCGGCGAGCTCAGCAAGGTGCTCGACGCCCGCGCGCCGGAGCCGAGCGCGCACGAGGCCG
AGGCCGTCGAGCTGGTCGCCTACACGGCGGTGCACTGCGTCCGGCTGGAGGGGAAGGACC
GGCCGGCGATGGCGGACATCGTGGCCAACCTCGAGACGGCGGTGGCGCTCTGCGAGGACA
GCGCCACCGGCGGCGGCGCCGCCGGCCATGGCAACAGCTCGTCCAGCGCCAGCCTCTCCA
TCACGTCCATGGAGTTGAGTAGGATGGATTGATTGAGATTAGTAGCTTCCCTAATTCAAA
TCCAGAGTTTCAAATTGTGATTAGCCCCGGAAGGAGATTTTAAAATTTGTTGCTTCACTT
CATTTTTTTTTAGAGGAGAACATCATTTGTGTGATTCTCTCACACATTTTGTTCATGGTG
GCTGTACATGATTTTGTATTGAACTGATTTCTCTTTTCATAGATGAGAAAATTTCTCTCT
TTT

consensusID : consensus_4209#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2045
fasta sequence 
                              [CTTCTTCTACGTACTCCTCCTCCCCCTTCTCCTCCTCGCCCCGGCCTCCGCCTCCACCGTCGCCATCGCCGCCGGCCCCACCGCCTGCGCCGTCGCGGAGGGAAACTCCACCGTCTACTGCGCCTCCGCCACCAACTCGTCCTCCTCCGCCGCCGTCGCGCCGTTCGTCAGCTTCTCCCAGGTGTCCGGCGGCGGGGGGGCGTTCGTCTGCGGGCTGCAGGTCGGGGGGCGCGCGCTCTTCTGCTGGCCCGCCGCGGCGCCGGGTCAGCTCAGGCGGGTGTACAACGGCCCGGGCCAGCTGTCACAGCTCGCCGTCGGGGGCGGCCATGTCGCGGCGTACGACGCCGCGGCGCGGGTGATACGGTGGTGGCGTGGCGGGGACCGGTTCCCTCTCTGGTTCGGCGGTGGGTTCGCCTCCCTCGTCTCCGGCGACGACTTCACCTGCGCCGTGGAGACGAGCACCTCCGCCGTCCGGTGCTGGGGCCCGCGCGGCGGCGCCGTGGAGGCGGGTTTTCTCAACGCCTCCGTCTCCGCCCTCGCCGCGGGAGGTTCCCGCGCGTGCGGGGTGAGGAGGAACGACGGCGGCGTGCTCTGCTCCGGCGGTGGCGTGCTCGCGCCGCGCGAGGACCTGTACGTGGACGGCCTGGCCGTCGGCGACTCCCACGCGTGCGGCCTCCTCCGGCCGAACCACACCGCCGCGTGCTGGAGCCTCGGGGGCGCCACCACCACGCTCTACTACCCGGCGGTCGGCACGGCGTTCGAGCTCCTCGTCGCCGGCGGTAACCTCACGTGCGGCCTCGTGTCGGCCAACTTCAGCCTGCTCTGCTGGTCGAGGGATGGGTTGGTGGCGGCGGAGGTGAACCTGCCGCCGATCCTCCCCGGCGTCTGCGTCTCCGACAACAGCTCGTGCAAATGCGGCCCGCTCCCGGACTCCGGGAGGTTCTGCAAGGTCTCCGGCGACGTCATCTGCAGAAGGTTCTGTGACACGTTGCCGCCGCCGCCGCCGCCGTCTCCTCGTACGCCGTCGCCGCCGGCGACCCCGAGCTCGAGACGCGGCGTGTCCAAAGGCTGGATCGCGTTCGCCGTCGTCGGCGCGGTGGGCTGCTTCGCGGGGCTCTGCTCCATCGTCTACTGCCTCCTCTTCGGCTTCTGCAGCCACAAGAAGGTGCACAACTCTGTCCAGCCCAACATCGCCGGTGGCCACGTCGTGGAAGCTGCGCATCAAGATCCTGCTCGACGCGTCGCGCGGCATCGACTACCTCCACTCGTACGCCGTGCCGCCGATCATCCACCGCGACATCAAGTCGTCGAACATCCTGCTCGACGGCAGCTGGGTGGCGCGCGTGTCGGACTTCGGGCTGTCGCTGATGGGGCCGGAGACGGAGGAGGTGAAGCACCTGTCGATGAAGGCCGCCGGGACGGTGGGGTACATGGACCCGGAGTACTACGGCCTCCACCACCTCACCGTCAAGAGCGACGTCTACGGCTTCGGCGTCGTCATGCTCGAGGCGCTCACCGGGAAGCGCGCCATCTTCAAGGAGGCCGAGGGCGGGAGCCCCGTCAGCGTGGTGGACTACGCCGTCCCCAGCATCGTCGCCGGCGAGCTCAGCAAGGTGCTCGACGCCCGCGCGCCGGAGCCGAGCGCGCACGAGGCCGAGGCCGTCGAGCTGGTCGCCTACACGGCGGTGCACTGCGTCCGGCTGGAGGGGAAGGACCGGCCGGCGATGGCGGACATCGTGGCCAACCTCGAGACGGCGGTGGCGCTCTGCGAGGACAGCGCCACCGGCGGCGGCGCCGCCGGCCATGGCAACAGCTCGTCCAGCGCCAGCCTCTCCATCACGTCCATGGAGTTGAGTAGGATGGATTGATTGAGATTAGTAGCTTCCCTAATTCAAATCCAGAGTTTCAAATTGTGATTAGCCCCGGAAGGAGATTTTAAAATTTGTTGCTTCACTTCATTTTTTTTAGAGGAGAACATCATTTGTGTGATTCTCTCACACATTTTGTTCATGGTGGCTGTACATGATTTTGTATTGAACTGATTT]

[+] EMBL AK106429             [CTTCTTCTACGTACTCCTCCTCCCCCTTCTCCTCCTCGCCCCGGCCTCCGCCTCCACCGTCGCCATCGCCGCCGGCCCCACCGCCTGCGCCGTCGCGGAGGGAAACTCCACCGTCTACTGCGCCTCCGCCACCAACTCGTCCTCCTCCGCCGCCGTCGCGCCGTTCGTCAGCTTCTCCCAGGTGTCCGGCGGCGGGGGGGCGTTCGTCTGCGGGCTGCAGGTCGGGGGGCGCGCGCTCTTCTGCTGGCCCGCCGCGGCGCCGGGTCAGCTCAGGCGGGTGTACAACGGCCCGGGCCAGCTGTCACAGCTCGCCGTCGGGGGCGGCCATGTCGCGGCGTACGACGCCGCGGCGCGGGTGATACGGTGGTGGCGTGGCGGGGACCGGTTCCCTCTCTGGTTCGGCGGTGGGTTCGCCTCCCTCGTCTCCGGCGACGACTTCACCTGCGCCGTGGAGACGAGCACCTCCGCCGTCCGGTGCTGGGGCCCGCGCGGCGGCGCCGTGGAGGCGGGTTTTCTCAACGCCTCCGTCTCCGCCCTCGCCGCGGGAGGTTCCCGCGCGTGCGGGGTGAGGAGGAACGACGGCGGCGTGCTCTGCTCCGGCGGTGGCGTGCTCGCGCCGCGCGAGGACCTGTACGTGGACGGCCTGGCCGTCGGCGACTCCCACGCGTGCGGCCTCCTCCGGCCGAACCACACCGCCGCGTGCTGGAGCCTCGGGGGCGCCACCACCACGCTCTACTACCCGGCGGTCGGCACGGCGTTCGAGCTCCTCGTCGCCGGCGGTAACCTCACGTGCGGCCTCGTGTCGGCCAACTTCAGCCTGCTCTGCTGGTCGAGGGATGGGTTGGTGGCGGCGGAGGTGAACCTGCCGCCGATCCTCCCCGGCGTCTGCGTCTCCGACAACAGCTCGTGCAAATGCGGCCCGCTCCCGGACTCCGGGAGGTTCTGCAAGGTCTCCGGCGACGTCATCTGCAGAAGGTTCTGTGACACGTTGCCGCCGCCGCCGCCGCCGTCTCCTCGTACGCCGTCGCCGCCGGCGACCCCGAGCTCGAGACGCGGCGTGTCCAAAGGCTGGATCGCGTTCGCCGTCGTCGGCGCGGTGGGCTGCTTCGCGGGGCTCTGCTCCATCGTCTACTGCCTCCTCTTCGGCTTCTGCAGCCACAAGAAGGTGCACAACTCTGTCCAGCCCAACATCGCCGGTGGCCACGTCGTGGAAGCTGCGCATCAAGATCCTGCTCGACGCGTCGCGCGGCATCGACTACCTCCACTCGTACGCCGTGCCGCCGATCATCCACCGCGACATCAAGTCGTCGAACATCCTGCTCGACGGCAGCTGGGTGGCGCGCGTGTCGGACTTCGGGCTGTCGCTGATGGGGCCGGAGACGGAGGAGGTGAAGCACCTGTCGATGAAGGCCGCCGGGACGGTGGGGTACATGGACCCGGAGTACTACGGCCTCCACCACCTCACCGTCAAGAGCGACGTCTACGGCTTCGGCGTCGTCATGCTCGAGGCGCTCACCGGGAAGCGCGCCATCTTCAAGGAGGCCGAGGGCGGGAGCCCCGTCAGCGTGGTGGACTACGCCGTCCCCAGCATCGTCGCCGGCGAGCTCAGCAAGGTGCTCGACGCCCGCGCGCCGGAGCCGAGCGCGCACGAGGCCGAGGCCGTCGAGCTGGTCGCCTACACGGCGGTGCACTGCGTCCGGCTGGAGGGGAAGGACCGGCCGGCGATGGCGGACATCGTGGCCAACCTCGAGACGGCGGTGGCGCTCTGCGAGGACAGCGCCACCGGCGGCGGCGCCGCCGGCCATGGCAACAGCTCGTCCAGCGCCAGCCTCTCCATCACGTCCATGGAGTTGAGTAGGATGGATTGATTGAGATTAGTAGCTTCCCTAATTCAAATCCAGAGTTTCAAATTGTGATTAGCCCCGGAAGGAGATTTTAAAATTTGTTGCTTCACTTCATTTTTTTTAGAGGAGAACATCATTTGTGTGATTCTCTCACACATTTTGTTCATGGTGGCTGTACATGATTTTGTATTGAACTGATTT]




>consensus_4209#1
CTTCTTCTACGTACTCCTCCTCCCCCTTCTCCTCCTCGCCCCGGCCTCCGCCTCCACCGT
CGCCATCGCCGCCGGCCCCACCGCCTGCGCCGTCGCGGAGGGAAACTCCACCGTCTACTG
CGCCTCCGCCACCAACTCGTCCTCCTCCGCCGCCGTCGCGCCGTTCGTCAGCTTCTCCCA
GGTGTCCGGCGGCGGGGGGGCGTTCGTCTGCGGGCTGCAGGTCGGGGGGCGCGCGCTCTT
CTGCTGGCCCGCCGCGGCGCCGGGTCAGCTCAGGCGGGTGTACAACGGCCCGGGCCAGCT
GTCACAGCTCGCCGTCGGGGGCGGCCATGTCGCGGCGTACGACGCCGCGGCGCGGGTGAT
ACGGTGGTGGCGTGGCGGGGACCGGTTCCCTCTCTGGTTCGGCGGTGGGTTCGCCTCCCT
CGTCTCCGGCGACGACTTCACCTGCGCCGTGGAGACGAGCACCTCCGCCGTCCGGTGCTG
GGGCCCGCGCGGCGGCGCCGTGGAGGCGGGTTTTCTCAACGCCTCCGTCTCCGCCCTCGC
CGCGGGAGGTTCCCGCGCGTGCGGGGTGAGGAGGAACGACGGCGGCGTGCTCTGCTCCGG
CGGTGGCGTGCTCGCGCCGCGCGAGGACCTGTACGTGGACGGCCTGGCCGTCGGCGACTC
CCACGCGTGCGGCCTCCTCCGGCCGAACCACACCGCCGCGTGCTGGAGCCTCGGGGGCGC
CACCACCACGCTCTACTACCCGGCGGTCGGCACGGCGTTCGAGCTCCTCGTCGCCGGCGG
TAACCTCACGTGCGGCCTCGTGTCGGCCAACTTCAGCCTGCTCTGCTGGTCGAGGGATGG
GTTGGTGGCGGCGGAGGTGAACCTGCCGCCGATCCTCCCCGGCGTCTGCGTCTCCGACAA
CAGCTCGTGCAAATGCGGCCCGCTCCCGGACTCCGGGAGGTTCTGCAAGGTCTCCGGCGA
CGTCATCTGCAGAAGGTTCTGTGACACGTTGCCGCCGCCGCCGCCGCCGTCTCCTCGTAC
GCCGTCGCCGCCGGCGACCCCGAGCTCGAGACGCGGCGTGTCCAAAGGCTGGATCGCGTT
CGCCGTCGTCGGCGCGGTGGGCTGCTTCGCGGGGCTCTGCTCCATCGTCTACTGCCTCCT
CTTCGGCTTCTGCAGCCACAAGAAGGTGCACAACTCTGTCCAGCCCAACATCGCCGGTGG
CCACGTCGTGGAAGCTGCGCATCAAGATCCTGCTCGACGCGTCGCGCGGCATCGACTACC
TCCACTCGTACGCCGTGCCGCCGATCATCCACCGCGACATCAAGTCGTCGAACATCCTGC
TCGACGGCAGCTGGGTGGCGCGCGTGTCGGACTTCGGGCTGTCGCTGATGGGGCCGGAGA
CGGAGGAGGTGAAGCACCTGTCGATGAAGGCCGCCGGGACGGTGGGGTACATGGACCCGG
AGTACTACGGCCTCCACCACCTCACCGTCAAGAGCGACGTCTACGGCTTCGGCGTCGTCA
TGCTCGAGGCGCTCACCGGGAAGCGCGCCATCTTCAAGGAGGCCGAGGGCGGGAGCCCCG
TCAGCGTGGTGGACTACGCCGTCCCCAGCATCGTCGCCGGCGAGCTCAGCAAGGTGCTCG
ACGCCCGCGCGCCGGAGCCGAGCGCGCACGAGGCCGAGGCCGTCGAGCTGGTCGCCTACA
CGGCGGTGCACTGCGTCCGGCTGGAGGGGAAGGACCGGCCGGCGATGGCGGACATCGTGG
CCAACCTCGAGACGGCGGTGGCGCTCTGCGAGGACAGCGCCACCGGCGGCGGCGCCGCCG
GCCATGGCAACAGCTCGTCCAGCGCCAGCCTCTCCATCACGTCCATGGAGTTGAGTAGGA
TGGATTGATTGAGATTAGTAGCTTCCCTAATTCAAATCCAGAGTTTCAAATTGTGATTAG
CCCCGGAAGGAGATTTTAAAATTTGTTGCTTCACTTCATTTTTTTTAGAGGAGAACATCA
TTTGTGTGATTCTCTCACACATTTTGTTCATGGTGGCTGTACATGATTTTGTATTGAACT
GATTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4209#0      CCTTCCTCTCACAAGTCTCCTCTTCTTCTACGTACTCCTCTCCTTCCCCCGCGCAGCCGT 60
consensus_4209#1      ------------------------------------------------------------
                                                                                  

consensus_4209#0      ACACGACTCCCGATGAGATGACGGCCACCGCCGCCGTCGTCGCCGCCCGCCTCATCCAAT 120
consensus_4209#1      ------------------------------------------------------------
                                                                                  

consensus_4209#0      GACCCCGCTCCTCCTCCTCCTCCTCCTCCCCCTTCTCCTCCTCGCCCCGGCCTCCGCCTC 180
consensus_4209#1      ------CTTCTTCTACGTACTCCTCCTCCCCCTTCTCCTCCTCGCCCCGGCCTCCGCCTC 54
                              ** **  * * *****************************************

consensus_4209#0      CACCGTCGCCATCGCCGCCGGCCCCACCGCCTGCGCCGTCGCGGAGGGAAACCTCCACCG 240
consensus_4209#1      CACCGTCGCCATCGCCGCCGGCCCCACCGCCTGCGCCGTCGCGGAGGGAAAC-TCCACCG 113
                      **************************************************** *******

consensus_4209#0      TCTACTGCGCCTCCGCCACCAACTCGTCCTCCTCCGCCGCCGTCGCGCCGTTCGTCAGCT 300
consensus_4209#1      TCTACTGCGCCTCCGCCACCAACTCGTCCTCCTCCGCCGCCGTCGCGCCGTTCGTCAGCT 173
                      ************************************************************

consensus_4209#0      TCTCCCAGGTGTCCGGCGGCGGGGGGGCGTTCGTCTGCGGGCTGCAGGTCGGGGGGCGCG 360
consensus_4209#1      TCTCCCAGGTGTCCGGCGGCGGGGGGGCGTTCGTCTGCGGGCTGCAGGTCGGGGGGCGCG 233
                      ************************************************************

consensus_4209#0      CGCTCTTCTGCTGGCCCGCCGCGGCGCCGGGTCAGCTCAGGCGGGTGTACAACGGCCCGG 420
consensus_4209#1      CGCTCTTCTGCTGGCCCGCCGCGGCGCCGGGTCAGCTCAGGCGGGTGTACAACGGCCCGG 293
                      ************************************************************

consensus_4209#0      GCCAGCTGTCACAGCTCGCCGTCGGGGGCGGCCATGTCGCGGCGTACGACGCCGCGGCGC 480
consensus_4209#1      GCCAGCTGTCACAGCTCGCCGTCGGGGGCGGCCATGTCGCGGCGTACGACGCCGCGGCGC 353
                      ************************************************************

consensus_4209#0      GGGTGATACGGTGGTGGCGTGGCGGGGACCGGTTCCCTCTCTGGTTCGGCGGTGGGTTCG 540
consensus_4209#1      GGGTGATACGGTGGTGGCGTGGCGGGGACCGGTTCCCTCTCTGGTTCGGCGGTGGGTTCG 413
                      ************************************************************

consensus_4209#0      CCTCCCTCGTCTCCGGCGACGACTTCACCTGCGCCGTGGAGACGAGCACCTCCGCCGTCC 600
consensus_4209#1      CCTCCCTCGTCTCCGGCGACGACTTCACCTGCGCCGTGGAGACGAGCACCTCCGCCGTCC 473
                      ************************************************************

consensus_4209#0      GGTGCTGGGGCCCGCGCGGCGGCGCCGTGGAGGCGGGTTTTCTCAACGCCTCCGTCTCCG 660
consensus_4209#1      GGTGCTGGGGCCCGCGCGGCGGCGCCGTGGAGGCGGGTTTTCTCAACGCCTCCGTCTCCG 533
                      ************************************************************

consensus_4209#0      CCCTCGCCGCGGGAGGTTCCCGCGCGTGCGGGGTGAGGAGGAACGACGGCGGCGTGCTCT 720
consensus_4209#1      CCCTCGCCGCGGGAGGTTCCCGCGCGTGCGGGGTGAGGAGGAACGACGGCGGCGTGCTCT 593
                      ************************************************************

consensus_4209#0      GCTCCGGCGGTGGCGTGCTCGCGCCGCGCGAGGACCTGTACGTGGACGGCCTGGCCGTCG 780
consensus_4209#1      GCTCCGGCGGTGGCGTGCTCGCGCCGCGCGAGGACCTGTACGTGGACGGCCTGGCCGTCG 653
                      ************************************************************

consensus_4209#0      GCGACTCCCACGCGTGCGGCCTCCTCCGGCCGAACCACACCGCCGCGTGCTGGAGCCTCG 840
consensus_4209#1      GCGACTCCCACGCGTGCGGCCTCCTCCGGCCGAACCACACCGCCGCGTGCTGGAGCCTCG 713
                      ************************************************************

consensus_4209#0      GGGGCGCCACCACCACGCTCTACTACCCGGCGGTCGGCACGGCGTTCGAGCTCCTCGTCG 900
consensus_4209#1      GGGGCGCCACCACCACGCTCTACTACCCGGCGGTCGGCACGGCGTTCGAGCTCCTCGTCG 773
                      ************************************************************

consensus_4209#0      CCGGCGGTAACCTCACGTGCGGCCTCGTGTCGGCCAACTTCAGCCTGCTCTGCTGGTCGA 960
consensus_4209#1      CCGGCGGTAACCTCACGTGCGGCCTCGTGTCGGCCAACTTCAGCCTGCTCTGCTGGTCGA 833
                      ************************************************************

consensus_4209#0      GGGATGGGTTGGTGGCGGCGGAGGTGAACCTGCCGCCGATCCTCCCCGGCGTCTGCGTCT 1020
consensus_4209#1      GGGATGGGTTGGTGGCGGCGGAGGTGAACCTGCCGCCGATCCTCCCCGGCGTCTGCGTCT 893
                      ************************************************************

consensus_4209#0      CCGACAACAGCTCGTGCAAATGCGGCCCGCTCCCGGACTCCGGGAGGTTCTGCAAGGTCT 1080
consensus_4209#1      CCGACAACAGCTCGTGCAAATGCGGCCCGCTCCCGGACTCCGGGAGGTTCTGCAAGGTCT 953
                      ************************************************************

consensus_4209#0      CCGGCGGCGCCGCCGCAGCTGTCGGCAGTGGCGCGCCGAGCCCGTACGGGTCGCCGAACG 1140
consensus_4209#1      CCGGCGACGTCAT----------------------------------------------- 966
                      ****** ** *                                                 

consensus_4209#0      GGTCGCTCGGCCGCCTGCGGCGGCAGCTGTCGCGCGTGATGACGCGGCAGCGGAGCGGGC 1200
consensus_4209#1      --------------CTGCAGAAGGTTCTGTGACACGT--TGCCGCCGCCGC--------- 1001
                                    **** *  *   ****  * ***  ** *** ** **         

consensus_4209#0      CGTCGTCGTTCAAGGACCCCGCCGAGGAGTTCACCTTCGCGCAGCTCGCGGCGGCGACCA 1260
consensus_4209#1      CGCCGCCGTCT-----CCTCG--------TACGCCGTCGC--------CGCCGGCGACC- 1039
                      ** ** ***       ** **        * * ** ****        ** ******** 

consensus_4209#0      AGGACTTCGCGGCGGAGGCCAAGATCGGGGAGGGGAGCTTCGGGACGGTGTACCGCGGCA 1320
consensus_4209#1      ------------------CCGAGCTCGAGACGCGGCGTGTCCAAAGGCTGGATCGCG--- 1078
                                        ** ** *** *  * ** *  **   * * ** * ****   

consensus_4209#0      AGCTCCCCGACGGGCGGGAGGTGGCCATCAAGCGCGGCGAGTCGGGGCCGCGCGCGCGCA 1380
consensus_4209#1      --TTCGCCGTCG----------------TCGGCGCGGTG------GGCTGC--------- 1105
                         ** *** **                   ****** *      *** **         

consensus_4209#0      AGTTCCAGGAGAAGGAGACGGCGTTCCGGTCGGAGCTGGCCTTCCTCTCGCGGCTCCACC 1440
consensus_4209#1      --TTC------------GCGGGGCTCTGCTC---------CATCGTCTACTGCCTCC--- 1139
                        ***             *** * ** * **         * ** ***   * ****   

consensus_4209#0      ACAAGCACCTCGTCGGCTTCGTCGGCTACTGCGAGGAGAGCGACGAGCGGCTGCTGGTCT 1500
consensus_4209#1      ------------------TCTTCGGCTTCTGC------AGCCACAAGAAGGTGC------ 1169
                                        ** ****** ****      *** ** **  * ***      

consensus_4209#0      ACGAGTACATGAAGAACGGCGCGCTCTACGACCACCTCCACCCCAAGCCCAACGGCTCGT 1560
consensus_4209#1      ---------------------------ACAACTCTGTCCAGCCCAA-------------- 1188
                                                 ** **    **** *****              

consensus_4209#0      CCTCGCCGTCCCCGTCGCCGGTGGCCACGTCGTGGAAGCTGCGCATCAAGATCCTGCTCG 1620
consensus_4209#1      ------------CATCGCCGGTGGCCACGTCGTGGAAGCTGCGCATCAAGATCCTGCTCG 1236
                                  * **********************************************

consensus_4209#0      ACGCGTCGCGCGGCATCGACTACCTCCACTCGTACGCCGTGCCGCCGATCATCCACCGCG 1680
consensus_4209#1      ACGCGTCGCGCGGCATCGACTACCTCCACTCGTACGCCGTGCCGCCGATCATCCACCGCG 1296
                      ************************************************************

consensus_4209#0      ACATCAAGTCGTCGAACATCCTGCTCGACGGCAGCTGGGTGGCGCGCGTGTCGGACTTCG 1740
consensus_4209#1      ACATCAAGTCGTCGAACATCCTGCTCGACGGCAGCTGGGTGGCGCGCGTGTCGGACTTCG 1356
                      ************************************************************

consensus_4209#0      GGCTGTCGCTGATGGGGCCGGAGACGGAGGAGGTGAAGCACCTGTCGATGAAGGCCGCCG 1800
consensus_4209#1      GGCTGTCGCTGATGGGGCCGGAGACGGAGGAGGTGAAGCACCTGTCGATGAAGGCCGCCG 1416
                      ************************************************************

consensus_4209#0      GGACGGTGGGGTACATGGACCCGGAGTACTACGGCCTCCACCACCTCACCGTCAAGAGCG 1860
consensus_4209#1      GGACGGTGGGGTACATGGACCCGGAGTACTACGGCCTCCACCACCTCACCGTCAAGAGCG 1476
                      ************************************************************

consensus_4209#0      ACGTCTACGGCTTCGGCGTCGTCATGCTCGAGGCGCTCACCGGGAAGCGCGCCATCTTCA 1920
consensus_4209#1      ACGTCTACGGCTTCGGCGTCGTCATGCTCGAGGCGCTCACCGGGAAGCGCGCCATCTTCA 1536
                      ************************************************************

consensus_4209#0      AGGAGGCCGAGGGCGGGAGCCCCGTCAGCGTGGTGGACTACGCAGTCCCCAGCATCGTCG 1980
consensus_4209#1      AGGAGGCCGAGGGCGGGAGCCCCGTCAGCGTGGTGGACTACGCCGTCCCCAGCATCGTCG 1596
                      ******************************************* ****************

consensus_4209#0      CCGGCGAGCTCAGCAAGGTGCTCGACGCCCGCGCGCCGGAGCCGAGCGCGCACGAGGCCG 2040
consensus_4209#1      CCGGCGAGCTCAGCAAGGTGCTCGACGCCCGCGCGCCGGAGCCGAGCGCGCACGAGGCCG 1656
                      ************************************************************

consensus_4209#0      AGGCCGTCGAGCTGGTCGCCTACACGGCGGTGCACTGCGTCCGGCTGGAGGGGAAGGACC 2100
consensus_4209#1      AGGCCGTCGAGCTGGTCGCCTACACGGCGGTGCACTGCGTCCGGCTGGAGGGGAAGGACC 1716
                      ************************************************************

consensus_4209#0      GGCCGGCGATGGCGGACATCGTGGCCAACCTCGAGACGGCGGTGGCGCTCTGCGAGGACA 2160
consensus_4209#1      GGCCGGCGATGGCGGACATCGTGGCCAACCTCGAGACGGCGGTGGCGCTCTGCGAGGACA 1776
                      ************************************************************

consensus_4209#0      GCGCCACCGGCGGCGGCGCCGCCGGCCATGGCAACAGCTCGTCCAGCGCCAGCCTCTCCA 2220
consensus_4209#1      GCGCCACCGGCGGCGGCGCCGCCGGCCATGGCAACAGCTCGTCCAGCGCCAGCCTCTCCA 1836
                      ************************************************************

consensus_4209#0      TCACGTCCATGGAGTTGAGTAGGATGGATTGATTGAGATTAGTAGCTTCCCTAATTCAAA 2280
consensus_4209#1      TCACGTCCATGGAGTTGAGTAGGATGGATTGATTGAGATTAGTAGCTTCCCTAATTCAAA 1896
                      ************************************************************

consensus_4209#0      TCCAGAGTTTCAAATTGTGATTAGCCCCGGAAGGAGATTTTAAAATTTGTTGCTTCACTT 2340
consensus_4209#1      TCCAGAGTTTCAAATTGTGATTAGCCCCGGAAGGAGATTTTAAAATTTGTTGCTTCACTT 1956
                      ************************************************************

consensus_4209#0      CATTTTTTTTTAGAGGAGAACATCATTTGTGTGATTCTCTCACACATTTTGTTCATGGTG 2400
consensus_4209#1      CATTTTTTTT-AGAGGAGAACATCATTTGTGTGATTCTCTCACACATTTTGTTCATGGTG 2015
                      ********** *************************************************

consensus_4209#0      GCTGTACATGATTTTGTATTGAACTGATTTCTCTTTTCATAGATGAGAAAATTTCTCTCT 2460
consensus_4209#1      GCTGTACATGATTTTGTATTGAACTGATTT------------------------------ 2045
                      ******************************                              

consensus_4209#0      TTT 2463
consensus_4209#1      ---


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)