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Oryza sativa
cluster # 4242 cluster # 4242       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4242#0 length = 3277 sequences # 2  
 consensus_4242#1 length = 395 sequences # 1  
consensusID : consensus_4242#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3277
fasta sequence 
                              [TTACCCTCAATGGCCGCCGCCATCCTCCGCGCCGCCCTCCGCCGGAGCCGTCCAGCTGCCGCGGCCCTCCTCCACCACCGTCCCCTCCCGTCCTCTCGAAGCCTCCCGCCTCTTCCTTCTCTCGGCCGGAGTTCTCCTCTCCTCTCCCGATTTCCAGGCTCCGCCGGATTCGTGTACTCCACCGTAGCGGATGAGTCGACCGCTCCCGTGAAGCCCAAGGGCAAGGCCAGGAAGAACCCCATGAAGCAGTCCCGCTTCGACTTCACCAAGGTGGACGCCGCGCTCCTACCCACCGTCATCCTCGTCGGCCGACCCAACGTTGGCAAGTCCGCCCTATTCAACCGATTTATACGAAGGAGGGAGGCATTGGTGTACAATACACCTGGGGACCATGTCACCCGTGACATTCGTGAAGGAGTTGCCAAGCTTGGTGATCTCCGTTTCCGTGTGCTTGACTCGGCTGGACTTGAGACAGCAGCAACATCTGGTAGCATCCTTGCTCGAACAGCTGACATGACTGGGAATGTGTTAGCTAGATCTCAATTTGCTATTTTCTTGATTGATGTCAGAGCAATGCTCTGTTTAGGGATGGTCTGCAGCCACTGGATCTTGAGGTTGGACAATGGCTGCGGAGACATGCATCTGGGATACATACCATTGTAGCAATGAACAAGTCTGAGTCACTTGATGAGCATGGAGTGCTGACTGCGGCTGCTGGAGAAGCCCATAGGTTGGGTTTTGGTGACCCAGTTGCAATATCTGCAGAGACAGGCCTGGGGATGGCAGAGCTTTATGAGACACTAAGGCCATTGTTTGAGGACTACATGTTTCAGCTAACAAACAATGGACTCAACCAAGATGACCCTACCTCTGAGGCTGAGACGGAAGCCCATGAAGGTGATGAAAGCAAGTTACCTTTGCATTTGGCAATTGTTGGGCGTCCTAATGTTGGGAAGTCTACCCTGCTGAATACCTTGTTGCAAGAACAAAGAGTTCTGGTTGGCCCCGAGGCAGGCTTAACAAGGGACTCTATTCGGACTCAGTTTCAGTTTGACAATCGAACTGTATATTTGGTGGACACTGCAGGTTGGATGGAAAGGTCAGGAAAGGAGAAAGGTCCAGCATCGTTGAGCGTGGTGCAGTCAAGAAAGAATCTGATGAGAGCTCATATTGTAGCTCTTGTTCTGGATGGAGAAAAGGTACTTAATTTCATCCTGATGTGCTCTGAGCCAATGACCTGCATATTTCTTACTATGCTTCTTTCTATGGTTAAGGGATAACATTTTCAATGCTCCCCTGTTCTGTAGTTTGTGTCTTTTTTTTTTCATAACGAAGAACTCCAAGTGAATATCTTTTACTACGGGTTTCTGGTGCCATGTTATTAATGTGGCATATATTCATGCCCCTTTGGAATGTGGAAAAAAAAAATCCTGATTTGCACTTGAGCAGGGCGTGCTATTCAACATTTCAACCTCTCAAGCCATGATTTGCTAATGGAGGCATCACTACATGTGTATGACTTTTGTCTGAATATTTGAGGGAATAAACAATAACTCAATTGATTGTGGTGTTCTTCTTTACCAATTGCATTTGCTAGATCACCTGGGTTATCTGCTCTTTAACCTTGATATGCATAAGTTCTATGTCAACTTGCCAAGTACAAAGAGTCAGACAGAGGATGAACAACCTCATCAAGCATGTTAACGTTGTTTATGTACTCTGCTAGAAACTAAGTTGCATTAGTCATGGGGCTGCACTACTAAAGTGCTAGTATTGGATGTGTTGGTGGTTGTAAATCATAGTTGATGTGCTTTTCACATTTATGGCGAGTGCCACCACCTTTTTATGTAAAATACATGTGAAATTTGGTCCAGTGCCAGTAATTTTTTGTACAGTCATTTATTTTGTAACAATCGCCTCCTCAATACTATTACTTCTTAACCGTAGTTCTGTTTAATGTACTGAATTTAGTTTTTGTAAGCTTGATGTTGTAATGTCAGTCCTATTTCAAACTAGTAAGCATCAGAAGCATCATAGTCAATGTTTAAATTGAATATACCAGTCTGATACTTTGCATGTCTATGCATTTGCTGTCATTTGATTTTTAACGGCCAATGCCATAACAAATCTTTATTAATTTGTAGATTGCAAAGTCTAAAAGTAGCATGAATCACCCTGAAGTTCTGATAGCACGGCAAGCAATAGAAGAAGGTCGTGGACTTGTTGTGATTGTCAACAAAATGGATCTTCTTAGGGAAAACCGACCATTGTTTGACAAAGTGATAGATGCTGTTCCTAAAGAAATCCAGACAGTTATTCCCCAGGTTACAGGAATACCAGTTGTGTTTATGTCTGCATTGGAGGGTAGGGGGCGGATTGCTGTCATGCGCCAGGTTATAGATACTTATGAGAAATGGTGTTTAAGGTTGTCGACCTCACGGCTGAACCGTTGGTTGCGTAAGGTTATGAGCAGACATTCCTGGAAAGACTCAGCTACCCAGCCAAAAGTGAAGTACTTCACTCAGGTGAAAGCACGGCCACCGACGTTCGTTGCCTTTATGAGTGGGAAGGTTCAGCTATCTGATACAGATATAAGGTTCTTGACAAAATCTCTCAAAGAAGATTTCGACATTGGAGGGATACCAATCCGGGTTGTACAGCGCACCATTCCTAGAAAAGAGACTGTAAAAAGCAACAGCAGGAATACCGGTCCTAGGATCAATACCAGGATGAGAACAGATAAAAGGACAACAGTATGTGAACCCACTACGTCATAGAGGATGCTGGCACGACGTACTACGAGCTAACCCTACAGAAGGGCGGCAATCTTCAGTGGTTGCTTTGTTATGAAGGTGACCTAGCTGATGGAAGAGAAACTGCTGCGTTTCAGTCAAAAAATGTAGCCAGTGGTTTAGCTAGCTTTGCTGCCTGCACCGAAGTGATCAAGATGGTAGCCGTTTGCTGATTGTTGAGAAGAAAGGAAAGCAATCTAACCGTGATGTGGTGATACTAATTTCTCCTGAGAACCGTGGAAAGGTGCGTCCTCTGCTTCGATTATCGAAGCCTGAAGGCAACGGCTGTGGTAGTGTTTTCGACAAAGCACAATGGATGGAGTATGACATCGAACTTATTTGTCAGGATGAAATCATGTTCTGTATTGTACAGAGAATAGACAAAAGGTGTTCTGAGTTTCGACCCATTCGGAGCTTCACCTAACAAAATAAAACTAGTGTGTTTGTACGGATAATCTGGATGTTAAGGCATTGACTTGAAACAA]

[+] EMBL AK121971             [TTACCCTCAATGGCCGCCGCCATCCTCCGCGCCGCCCTCCGCCGGAGCCGTCCAGCTGCCGCGGCCCTCCTCCACCACCGTCCCCTCCCGTCCTCTCGAAGCCTCCCGCCTCTTCCTTCTCTCGGCCGGAGTTCTCCTCTCCTCTCCCGATTTCCAGGCTCCGCCGGATTCGTGTACTCCACCGTAGCGGATGAGTCGACCGCTCCCGTGAAGCCCAAGGGCAAGGCCAGGAAGAACCCCATGAAGCAGTCCCGCTTCGACTTCACCAAGGTGGACGCCGCGCTCCTACCCACCGTCATCCTCGTCGGCCGACCCAACGTTGGCAAGTCCGCCCTATTCAACCGATTTATACGAAGGAGGGAGGCATTGGTGTACAATACACCTGGGGACCATGTCACCCGTGACATTCGTGAAGGAGTTGCCAAGCTTGGTGATCTCCGTTTCCGTGTGCTTGACTCGGCTGGACTTGAGACAGCAGCAACATCTGGTAGCATCCTTGCTCGAACAGCTGACATGACTGGGAATGTGTTAGCTAGATCTCAATTTGCTATTTTCTTGATTGATGTCAGAGCAATGCTCTGTTTAGGGATGGTCTGCAGCCACTGGATCTTGAGGTTGGACAATGGCTGCGGAGACATGCATCTGGGATACATACCATTGTAGCAATGAACAAGTCTGAGTCACTTGATGAGCATGGAGTGCTGACTGCGGCTGCTGGAGAAGCCCATAGGTTGGGTTTTGGTGACCCAGTTGCAATATCTGCAGAGACAGGCCTGGGGATGGCAGAGCTTTATGAGACACTAAGGCCATTGTTTGAGGACTACATGTTTCAGCTAACAAACAATGGACTCAACCAAGATGACCCTACCTCTGAGGCTGAGACGGAAGCCCATGAAGGTGATGAAAGCAAGTTACCTTTGCATTTGGCAATTGTTGGGCGTCCTAATGTTGGGAAGTCTACCCTGCTGAATACCTTGTTGCAAGAACAAAGAGTTCTGGTTGGCCCCGAGGCAGGCTTAACAAGGGACTCTATTCGGACTCAGTTTCAGTTTGACAATCGAACTGTATATTTGGTGGACACTGCAGGTTGGATGGAAAGGTCAGGAAAGGAGAAAGGTCCAGCATCGTTGAGCGTGGTGCAGTCAAGAAAGAATCTGATGAGAGCTCATATTGTAGCTCTTGTTCTGGATGGAGAAAAGGTACTTAATTTCATCCTGATGTGCTCTGAGCCAATGACCTGCATATTTCTTACTATGCTTCTTTCTATGGTTAAGGGATAACATTTTCAATGCTCCCCTGTTCTGTAGTTTGTGTCTTTTTTTTTTCATAACGAAGAACTCCAAGTGAATATCTTTTACTACGGGTTTCTGGTGCCATGTTATTAATGTGGCATATATTCATGCCCCTTTGGAATGTGGAAAAAAAAAATCCTGATTTGCACTTGAGCAGGGCGTGCTATTCAACATTTCAACCTCTCAAGCCATGATTTGCTAATGGAGGCATCACTACATGTGTATGACTTTTGTCTGAATATTTGAGGGAATAAACAATAACTCAATTGATTGTGGTGTTCTTCTTTACCAATTGCATTTGCTAGATCACCTGGGTTATCTGCTCTTTAACCTTGATATGCATAAGTTCTATGTCAACTTGCCAAGTACAAAGAGTCAGACAGAGGATGAACAACCTCATCAAGCATGTTAACGTTGTTTATGTACTCTGCTAGAAACTAAGTTGCATTAGTCATGGGGCTGCACTACTAAAGTGCTAGTATTGGATGTGTTGGTGGTTGTAAATCATAGTTGATGTGCTTTTCACATTTATGGCGAGTGCCACCACCTTTTTATGTAAAATACATGTGAAATTTGGTCCAGTGCCAGTAATTTTTTGTACAGTCATTTATTTTGTAACAATCGCCTCCTCAATACTATTACTTCTTAACCGTAGTTCTGTTTAATGTACTGAATTTAGTTTTTGTAAGCTTGATGTTGTAATGTCAGTCCTATTTCAAACTAGTAAGCATCAGAAGCATCATAGTCAATGTTTAAATTGAATATACCAGTCTGATACTTTGCATGTCTATGCATTTGCTGTCATTTGATTTTTAACGGCCAATGCCATAACAAATCTTTATTAATTTGTAGATTGCAAAGTCTAAAAGTAGCATGAATCACCCTGAAGTTCTGATAGCACGGCAAGCAATAGAAGAAGGTCGTGGACTTGTTGTGATTGTCAACAAAATGGATCTTCTTAGGGAAAACCGACCATTGTTTGACAAAGTGATAGATGCTGTTCCTAAAGAAATCCAGACAGTTATTCCCCAGGTTACAGGAATACCAGTTGTGTTTATGTCTGCATTGGAGGGTAGGGGGCGGATTGCTGTCATGCGCCAGGTTATAGATACTTATGAGAAATGGTGTTTAAGGTTGTCGACCTCACGGCTGAACCGTTGGTTGCGTAAGGTTATGAGCAGACATTCCTGGAAAGACTCAGCTACCCAGCCAAAAGTGAAGTACTTCACTCAGGTGAAAGCACGGCCACCGACGTTCGTTGCCTTTATGAGTGGGAAGGTTCAGCTATCTGATACAGATATAAGGTTCTTGACAAAATCTCTCAAAGAAGATTTCGACATTGGAGGGATACCAATCCGGGTTGTACAGCGCACCATTCCTAGAAAAGAGACTGTAAAAAGCAACAGCAGGAATACCGGTCCTAGGATCAATACCAGGATGAGAACAGATAAAAGGACAACAGTATGTGAACCCACTACGTCATAGAGGATGCTGGCACGACGTACTACGAGCTAACCCTACAGAAGGGCGGCAATCTTCAGTGGTTGCTTTGTTATGAAGGTGACCTAGCTGATGGAAGAGAAACTGCTGCGTTTCAGTCAAAAAATGTAGCCAGTGGTTTAGCTAGCTTTGCTGCCTGCACCGAAGTGATCAAGATGGTAGCCGTTTGCTGATTGTTGAGAAGAAAGGAAAGCAATCTAACCGTGATGTGGTGATACTAATTTCTCCTGAGAACCGTGGAAAGGTGCGTCCTCTGCTTCGATTATCGAAGCCTGAAGGCAACGGCTGTGGTAGTGTTTTCGACAAAGCACAATGGATGGAGTATGACATCGAACTTATTTGTCAGGATGAAATCATGTTCTGTATTGTACAGAGAATAGACAAAAGGTGTTCTGAGTTTCGACCCATTCGGAGCTTCACCTAACAAAATAAAACTAGTGTGTTTGTACGGATAATCTGGATGTTAAGGCATTGACTTGAAACAA]
[+] EMBL AU174844             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGACGT CTCCGAGCTAACCCTCCAGAAGGGCGGCAATCTTCAGTGGTTGCTTTGTTATGAAGGTGACCTAGCTGATGGAAGAGAAACTGCTGCGTTTCAGTCAAAAAATGTAGCCAGTGGTTTAGCTAGCTTTGCTGCCTGCACCGAAGTGATCAAGATGGTAGCCGTTTGCTGATTGTTGAGAAGAAAGGAAAGCAATCTAACCGTGATGTGGTGATACTAATTTCTCCTGAGAACCGTGGAAAGGTGCATCCTCTGCTTCGATTATCGAAGCCTGAAGGCAACGGCTGTGGTAGTGTTTTCGACAAAGCACAATGGATGGAGTATGACATCGAACTTATTTGTCAGGATGAAATCATGTTCTGTATTGTACAGAGAATAGACAAAAGGTGTTCTGAGTTTCGACCCATTCGGAGCTTCACCTAACAAAATAAAACTAGTGTGTTTGTACGGATAAaaaaaaa                       ]




>consensus_4242#0
TTACCCTCAATGGCCGCCGCCATCCTCCGCGCCGCCCTCCGCCGGAGCCGTCCAGCTGCC
GCGGCCCTCCTCCACCACCGTCCCCTCCCGTCCTCTCGAAGCCTCCCGCCTCTTCCTTCT
CTCGGCCGGAGTTCTCCTCTCCTCTCCCGATTTCCAGGCTCCGCCGGATTCGTGTACTCC
ACCGTAGCGGATGAGTCGACCGCTCCCGTGAAGCCCAAGGGCAAGGCCAGGAAGAACCCC
ATGAAGCAGTCCCGCTTCGACTTCACCAAGGTGGACGCCGCGCTCCTACCCACCGTCATC
CTCGTCGGCCGACCCAACGTTGGCAAGTCCGCCCTATTCAACCGATTTATACGAAGGAGG
GAGGCATTGGTGTACAATACACCTGGGGACCATGTCACCCGTGACATTCGTGAAGGAGTT
GCCAAGCTTGGTGATCTCCGTTTCCGTGTGCTTGACTCGGCTGGACTTGAGACAGCAGCA
ACATCTGGTAGCATCCTTGCTCGAACAGCTGACATGACTGGGAATGTGTTAGCTAGATCT
CAATTTGCTATTTTCTTGATTGATGTCAGAGCAATGCTCTGTTTAGGGATGGTCTGCAGC
CACTGGATCTTGAGGTTGGACAATGGCTGCGGAGACATGCATCTGGGATACATACCATTG
TAGCAATGAACAAGTCTGAGTCACTTGATGAGCATGGAGTGCTGACTGCGGCTGCTGGAG
AAGCCCATAGGTTGGGTTTTGGTGACCCAGTTGCAATATCTGCAGAGACAGGCCTGGGGA
TGGCAGAGCTTTATGAGACACTAAGGCCATTGTTTGAGGACTACATGTTTCAGCTAACAA
ACAATGGACTCAACCAAGATGACCCTACCTCTGAGGCTGAGACGGAAGCCCATGAAGGTG
ATGAAAGCAAGTTACCTTTGCATTTGGCAATTGTTGGGCGTCCTAATGTTGGGAAGTCTA
CCCTGCTGAATACCTTGTTGCAAGAACAAAGAGTTCTGGTTGGCCCCGAGGCAGGCTTAA
CAAGGGACTCTATTCGGACTCAGTTTCAGTTTGACAATCGAACTGTATATTTGGTGGACA
CTGCAGGTTGGATGGAAAGGTCAGGAAAGGAGAAAGGTCCAGCATCGTTGAGCGTGGTGC
AGTCAAGAAAGAATCTGATGAGAGCTCATATTGTAGCTCTTGTTCTGGATGGAGAAAAGG
TACTTAATTTCATCCTGATGTGCTCTGAGCCAATGACCTGCATATTTCTTACTATGCTTC
TTTCTATGGTTAAGGGATAACATTTTCAATGCTCCCCTGTTCTGTAGTTTGTGTCTTTTT
TTTTTCATAACGAAGAACTCCAAGTGAATATCTTTTACTACGGGTTTCTGGTGCCATGTT
ATTAATGTGGCATATATTCATGCCCCTTTGGAATGTGGAAAAAAAAAATCCTGATTTGCA
CTTGAGCAGGGCGTGCTATTCAACATTTCAACCTCTCAAGCCATGATTTGCTAATGGAGG
CATCACTACATGTGTATGACTTTTGTCTGAATATTTGAGGGAATAAACAATAACTCAATT
GATTGTGGTGTTCTTCTTTACCAATTGCATTTGCTAGATCACCTGGGTTATCTGCTCTTT
AACCTTGATATGCATAAGTTCTATGTCAACTTGCCAAGTACAAAGAGTCAGACAGAGGAT
GAACAACCTCATCAAGCATGTTAACGTTGTTTATGTACTCTGCTAGAAACTAAGTTGCAT
TAGTCATGGGGCTGCACTACTAAAGTGCTAGTATTGGATGTGTTGGTGGTTGTAAATCAT
AGTTGATGTGCTTTTCACATTTATGGCGAGTGCCACCACCTTTTTATGTAAAATACATGT
GAAATTTGGTCCAGTGCCAGTAATTTTTTGTACAGTCATTTATTTTGTAACAATCGCCTC
CTCAATACTATTACTTCTTAACCGTAGTTCTGTTTAATGTACTGAATTTAGTTTTTGTAA
GCTTGATGTTGTAATGTCAGTCCTATTTCAAACTAGTAAGCATCAGAAGCATCATAGTCA
ATGTTTAAATTGAATATACCAGTCTGATACTTTGCATGTCTATGCATTTGCTGTCATTTG
ATTTTTAACGGCCAATGCCATAACAAATCTTTATTAATTTGTAGATTGCAAAGTCTAAAA
GTAGCATGAATCACCCTGAAGTTCTGATAGCACGGCAAGCAATAGAAGAAGGTCGTGGAC
TTGTTGTGATTGTCAACAAAATGGATCTTCTTAGGGAAAACCGACCATTGTTTGACAAAG
TGATAGATGCTGTTCCTAAAGAAATCCAGACAGTTATTCCCCAGGTTACAGGAATACCAG
TTGTGTTTATGTCTGCATTGGAGGGTAGGGGGCGGATTGCTGTCATGCGCCAGGTTATAG
ATACTTATGAGAAATGGTGTTTAAGGTTGTCGACCTCACGGCTGAACCGTTGGTTGCGTA
AGGTTATGAGCAGACATTCCTGGAAAGACTCAGCTACCCAGCCAAAAGTGAAGTACTTCA
CTCAGGTGAAAGCACGGCCACCGACGTTCGTTGCCTTTATGAGTGGGAAGGTTCAGCTAT
CTGATACAGATATAAGGTTCTTGACAAAATCTCTCAAAGAAGATTTCGACATTGGAGGGA
TACCAATCCGGGTTGTACAGCGCACCATTCCTAGAAAAGAGACTGTAAAAAGCAACAGCA
GGAATACCGGTCCTAGGATCAATACCAGGATGAGAACAGATAAAAGGACAACAGTATGTG
AACCCACTACGTCATAGAGGATGCTGGCACGACGTACTACGAGCTAACCCTACAGAAGGG
CGGCAATCTTCAGTGGTTGCTTTGTTATGAAGGTGACCTAGCTGATGGAAGAGAAACTGC
TGCGTTTCAGTCAAAAAATGTAGCCAGTGGTTTAGCTAGCTTTGCTGCCTGCACCGAAGT
GATCAAGATGGTAGCCGTTTGCTGATTGTTGAGAAGAAAGGAAAGCAATCTAACCGTGAT
GTGGTGATACTAATTTCTCCTGAGAACCGTGGAAAGGTGCGTCCTCTGCTTCGATTATCG
AAGCCTGAAGGCAACGGCTGTGGTAGTGTTTTCGACAAAGCACAATGGATGGAGTATGAC
ATCGAACTTATTTGTCAGGATGAAATCATGTTCTGTATTGTACAGAGAATAGACAAAAGG
TGTTCTGAGTTTCGACCCATTCGGAGCTTCACCTAACAAAATAAAACTAGTGTGTTTGTA
CGGATAATCTGGATGTTAAGGCATTGACTTGAAACAA

consensusID : consensus_4242#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 395
fasta sequence 
                              [AAGCCCATGAAGGTGATGAAAGCAAGTTACCTTTGCAATTGGCAATTGTTGGGCGTCCTAATGTTGGGAAGTCTACCCTGCTGAATACCTTGTTGCAAGAACAAAGAGTTCTGGTTGGCCCCGAGGCAGGCTTAACAAGGGACTCTATTCGGACTCAGTTTCAGTTTGACAATCGAACTGTATATTTGGTGGACACTGCAGGTTGGATGGAAAGGTCAGGAAAGGAGAAAGGTCCAGCATCGTTGAGCGTGGTGCAGTCAAGAAAGAATCTGATGAGAGCTCATATTGTAGCTCTTGTTCTGGATGGAGAAAAGATTGCAAAGTCTAAAAGTAGCATGAATCACCCTGAAGTTCTGATAGCACGGCAAGCAATAGAAGAAGGTCGNGGACTTGTT]

[+] EMBL AU174845             [AAGCCCATGAAGGTGATGAAAGCAAGTTACCTTTGCAATTGGCAATTGTTGGGCGTCCTAATGTTGGGAAGTCTACCCTGCTGAATACCTTGTTGCAAGAACAAAGAGTTCTGGTTGGCCCCGAGGCAGGCTTAACAAGGGACTCTATTCGGACTCAGTTTCAGTTTGACAATCGAACTGTATATTTGGTGGACACTGCAGGTTGGATGGAAAGGTCAGGAAAGGAGAAAGGTCCAGCATCGTTGAGCGTGGTGCAGTCAAGAAAGAATCTGATGAGAGCTCATATTGTAGCTCTTGTTCTGGATGGAGAAAAGATTGCAAAGTCTAAAAGTAGCATGAATCACCCTGAAGTTCTGATAGCACGGCAAGCAATAGAAGAAGGTCGNGGACTTGTT]




>consensus_4242#1
AAGCCCATGAAGGTGATGAAAGCAAGTTACCTTTGCAATTGGCAATTGTTGGGCGTCCTA
ATGTTGGGAAGTCTACCCTGCTGAATACCTTGTTGCAAGAACAAAGAGTTCTGGTTGGCC
CCGAGGCAGGCTTAACAAGGGACTCTATTCGGACTCAGTTTCAGTTTGACAATCGAACTG
TATATTTGGTGGACACTGCAGGTTGGATGGAAAGGTCAGGAAAGGAGAAAGGTCCAGCAT
CGTTGAGCGTGGTGCAGTCAAGAAAGAATCTGATGAGAGCTCATATTGTAGCTCTTGTTC
TGGATGGAGAAAAGATTGCAAAGTCTAAAAGTAGCATGAATCACCCTGAAGTTCTGATAG
CACGGCAAGCAATAGAAGAAGGTCGNGGACTTGTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4242#0      TTACCCTCAATGGCCGCCGCCATCCTCCGCGCCGCCCTCCGCCGGAGCCGTCCAGCTGCC 60
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      GCGGCCCTCCTCCACCACCGTCCCCTCCCGTCCTCTCGAAGCCTCCCGCCTCTTCCTTCT 120
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      CTCGGCCGGAGTTCTCCTCTCCTCTCCCGATTTCCAGGCTCCGCCGGATTCGTGTACTCC 180
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      ACCGTAGCGGATGAGTCGACCGCTCCCGTGAAGCCCAAGGGCAAGGCCAGGAAGAACCCC 240
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      ATGAAGCAGTCCCGCTTCGACTTCACCAAGGTGGACGCCGCGCTCCTACCCACCGTCATC 300
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      CTCGTCGGCCGACCCAACGTTGGCAAGTCCGCCCTATTCAACCGATTTATACGAAGGAGG 360
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      GAGGCATTGGTGTACAATACACCTGGGGACCATGTCACCCGTGACATTCGTGAAGGAGTT 420
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      GCCAAGCTTGGTGATCTCCGTTTCCGTGTGCTTGACTCGGCTGGACTTGAGACAGCAGCA 480
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      ACATCTGGTAGCATCCTTGCTCGAACAGCTGACATGACTGGGAATGTGTTAGCTAGATCT 540
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      CAATTTGCTATTTTCTTGATTGATGTCAGAGCAATGCTCTGTTTAGGGATGGTCTGCAGC 600
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      CACTGGATCTTGAGGTTGGACAATGGCTGCGGAGACATGCATCTGGGATACATACCATTG 660
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      TAGCAATGAACAAGTCTGAGTCACTTGATGAGCATGGAGTGCTGACTGCGGCTGCTGGAG 720
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      AAGCCCATAGGTTGGGTTTTGGTGACCCAGTTGCAATATCTGCAGAGACAGGCCTGGGGA 780
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      TGGCAGAGCTTTATGAGACACTAAGGCCATTGTTTGAGGACTACATGTTTCAGCTAACAA 840
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      ACAATGGACTCAACCAAGATGACCCTACCTCTGAGGCTGAGACGGAAGCCCATGAAGGTG 900
consensus_4242#1      ---------------------------------------------AAGCCCATGAAGGTG 15
                                                                   ***************

consensus_4242#0      ATGAAAGCAAGTTACCTTTGCATTTGGCAATTGTTGGGCGTCCTAATGTTGGGAAGTCTA 960
consensus_4242#1      ATGAAAGCAAGTTACCTTTGCAATTGGCAATTGTTGGGCGTCCTAATGTTGGGAAGTCTA 75
                      ********************** *************************************

consensus_4242#0      CCCTGCTGAATACCTTGTTGCAAGAACAAAGAGTTCTGGTTGGCCCCGAGGCAGGCTTAA 1020
consensus_4242#1      CCCTGCTGAATACCTTGTTGCAAGAACAAAGAGTTCTGGTTGGCCCCGAGGCAGGCTTAA 135
                      ************************************************************

consensus_4242#0      CAAGGGACTCTATTCGGACTCAGTTTCAGTTTGACAATCGAACTGTATATTTGGTGGACA 1080
consensus_4242#1      CAAGGGACTCTATTCGGACTCAGTTTCAGTTTGACAATCGAACTGTATATTTGGTGGACA 195
                      ************************************************************

consensus_4242#0      CTGCAGGTTGGATGGAAAGGTCAGGAAAGGAGAAAGGTCCAGCATCGTTGAGCGTGGTGC 1140
consensus_4242#1      CTGCAGGTTGGATGGAAAGGTCAGGAAAGGAGAAAGGTCCAGCATCGTTGAGCGTGGTGC 255
                      ************************************************************

consensus_4242#0      AGTCAAGAAAGAATCTGATGAGAGCTCATATTGTAGCTCTTGTTCTGGATGGAGAAAAGG 1200
consensus_4242#1      AGTCAAGAAAGAATCTGATGAGAGCTCATATTGTAGCTCTTGTTCTGGATGGAGAAAAGA 315
                      *********************************************************** 

consensus_4242#0      TACTTAATTTCATCCTGATGTGCTCTGAGCCAATGACCTGCATATTTCTTACTATGCTTC 1260
consensus_4242#1      TTGCAAA----GTCTAAAAGTAGCATGAATCA-----CCCTGAAGTTCTGATAGCACGGC 366
                      *    **     **   * **    ***  **     *     * **** *     *  *

consensus_4242#0      TTTCTATGGTTAAGGGATAACATTTTCAATGCTCCCCTGTTCTGTAGTTTGTGTCTTTTT 1320
consensus_4242#1      AAGCAATAGAAGAAGGTCGNGGACTTGTT------------------------------- 395
                         * ** *   * **        **                                  

consensus_4242#0      TTTTTCATAACGAAGAACTCCAAGTGAATATCTTTTACTACGGGTTTCTGGTGCCATGTT 1380
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      ATTAATGTGGCATATATTCATGCCCCTTTGGAATGTGGAAAAAAAAAATCCTGATTTGCA 1440
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      CTTGAGCAGGGCGTGCTATTCAACATTTCAACCTCTCAAGCCATGATTTGCTAATGGAGG 1500
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      CATCACTACATGTGTATGACTTTTGTCTGAATATTTGAGGGAATAAACAATAACTCAATT 1560
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      GATTGTGGTGTTCTTCTTTACCAATTGCATTTGCTAGATCACCTGGGTTATCTGCTCTTT 1620
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      AACCTTGATATGCATAAGTTCTATGTCAACTTGCCAAGTACAAAGAGTCAGACAGAGGAT 1680
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      GAACAACCTCATCAAGCATGTTAACGTTGTTTATGTACTCTGCTAGAAACTAAGTTGCAT 1740
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      TAGTCATGGGGCTGCACTACTAAAGTGCTAGTATTGGATGTGTTGGTGGTTGTAAATCAT 1800
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      AGTTGATGTGCTTTTCACATTTATGGCGAGTGCCACCACCTTTTTATGTAAAATACATGT 1860
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      GAAATTTGGTCCAGTGCCAGTAATTTTTTGTACAGTCATTTATTTTGTAACAATCGCCTC 1920
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      CTCAATACTATTACTTCTTAACCGTAGTTCTGTTTAATGTACTGAATTTAGTTTTTGTAA 1980
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      GCTTGATGTTGTAATGTCAGTCCTATTTCAAACTAGTAAGCATCAGAAGCATCATAGTCA 2040
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      ATGTTTAAATTGAATATACCAGTCTGATACTTTGCATGTCTATGCATTTGCTGTCATTTG 2100
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      ATTTTTAACGGCCAATGCCATAACAAATCTTTATTAATTTGTAGATTGCAAAGTCTAAAA 2160
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      GTAGCATGAATCACCCTGAAGTTCTGATAGCACGGCAAGCAATAGAAGAAGGTCGTGGAC 2220
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      TTGTTGTGATTGTCAACAAAATGGATCTTCTTAGGGAAAACCGACCATTGTTTGACAAAG 2280
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      TGATAGATGCTGTTCCTAAAGAAATCCAGACAGTTATTCCCCAGGTTACAGGAATACCAG 2340
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      TTGTGTTTATGTCTGCATTGGAGGGTAGGGGGCGGATTGCTGTCATGCGCCAGGTTATAG 2400
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      ATACTTATGAGAAATGGTGTTTAAGGTTGTCGACCTCACGGCTGAACCGTTGGTTGCGTA 2460
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      AGGTTATGAGCAGACATTCCTGGAAAGACTCAGCTACCCAGCCAAAAGTGAAGTACTTCA 2520
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      CTCAGGTGAAAGCACGGCCACCGACGTTCGTTGCCTTTATGAGTGGGAAGGTTCAGCTAT 2580
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      CTGATACAGATATAAGGTTCTTGACAAAATCTCTCAAAGAAGATTTCGACATTGGAGGGA 2640
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      TACCAATCCGGGTTGTACAGCGCACCATTCCTAGAAAAGAGACTGTAAAAAGCAACAGCA 2700
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      GGAATACCGGTCCTAGGATCAATACCAGGATGAGAACAGATAAAAGGACAACAGTATGTG 2760
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      AACCCACTACGTCATAGAGGATGCTGGCACGACGTACTACGAGCTAACCCTACAGAAGGG 2820
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      CGGCAATCTTCAGTGGTTGCTTTGTTATGAAGGTGACCTAGCTGATGGAAGAGAAACTGC 2880
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      TGCGTTTCAGTCAAAAAATGTAGCCAGTGGTTTAGCTAGCTTTGCTGCCTGCACCGAAGT 2940
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      GATCAAGATGGTAGCCGTTTGCTGATTGTTGAGAAGAAAGGAAAGCAATCTAACCGTGAT 3000
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      GTGGTGATACTAATTTCTCCTGAGAACCGTGGAAAGGTGCGTCCTCTGCTTCGATTATCG 3060
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      AAGCCTGAAGGCAACGGCTGTGGTAGTGTTTTCGACAAAGCACAATGGATGGAGTATGAC 3120
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      ATCGAACTTATTTGTCAGGATGAAATCATGTTCTGTATTGTACAGAGAATAGACAAAAGG 3180
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      TGTTCTGAGTTTCGACCCATTCGGAGCTTCACCTAACAAAATAAAACTAGTGTGTTTGTA 3240
consensus_4242#1      ------------------------------------------------------------
                                                                                  

consensus_4242#0      CGGATAATCTGGATGTTAAGGCATTGACTTGAAACAA 3277
consensus_4242#1      -------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)