cluster # 4244

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Oryza sativa
cluster # 4244 cluster # 4244 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4244#0 length = 2435 sequences # 3
consensusID : consensus_4244#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2435
fasta sequence
                              [CAAGGCAGCGTGAGGAGGAGGAGGAGGGGAGCTCAGCTCACGCAGAGGCGACGACGACGCGCACGCGCACCGCCCTCCTCCCTCCCCGCGATCTCGCCGTAGGGGATCTCGTCGGCGGCGAGGAAGCAAAGGCCGAGGGGGCAGCGGCTGGGGAGGGGAGGGGAGGGGAGAGCGGCATTGGTTGGAGCTTGGAGGAAGTTGGGTGTGTGTGTCTGGGGGTGAGGGTGAGGGATCGGATCGAAGCTTCTGGAAGGTTCCGGGCGCGGATCCGGCTCGGTGGGTTGCTCGCTCGTGGCTGGAGGTAGCGGCGCGCTGTTTGAGCGGGGGGAGCAACTCTGAGGTTTGGTTTTCCTGAGATGGAGGACCTGCTGGGCGCGGAGGTCGGCAAGAACGACTATGACTGGCTTCTTACTCCCCCTGGGACACCCCGTTGTCCTGTACTGGAGGTTGCTGAGAAAACACCATCCCCAAATATATTACCTAAGCGCACTGCCACTAGATCATCGTCAACCACCAGAGCGTCGAGGCTTTCAGTATCTCAAACAGAGAATGGTCATTCTACAGCTCCCACTAGACCAGCTAGAAGTAACTCTGTCACTCGCCCTTCTATTCAGTCCACTCTCATGTCTAGCTCCAACAGGACAGCAGTTCTCAATACAAGCATTTCCTCCGTCAGCTCAAGACCTACAACCCCAAGTAGGCGAAGCAGCACTGTTGTTGCACCAAAGCAATCAATTGCAGCTTCACGCCCTGTTCCAGCAAGGTCCTCCACTCCTGTTAAAACTCGTCCATCTACACCAACCAAAACTCGCCCATCTACTCCTGTGAGAACTCGTCAAACAGCCAATTCTACAAGCGACTCAGCTGCTGCCAGGACCACATCCGCTCAAAATTCAAGGCCATCAACGCCAACCTCTAGATCACGTGCTATGCCCAATTCATCTTCTGGTGCAATTCCTGCAATGAGCCGCCCAGGTGCATCTACAATTTCTGCAACAAGTCGCTCAAATGCATCTACAATATCTGCAACAAGCCGTCCTGGCTCATCCTCAAGTAATGTACCTGGGATAAGCCGTGCCACCTCATTGTCTTCAAGTACAGTTCCTTCAATGAGCCGCTCCAGCTCACGTTCATCCACACCTACACGCCAGCCTGCAATGCGCTCATCGGCCCCTGCTGTTGGTCGCTCGCCTTCTGTTGGGCGGAGTTCTAGCATCAGTAGCTTGACATCATCTATCAATCGACCTGCAGCAAATGGTGGCCGGAACTCAGCACCTTCATCGGCTCCGTCATCTCGTCCAAGTTCCCCTGGTCCACGACCTCGAGCTCCAGTTCGTCCACTTGATATCCCTGATTTTCCAAATGAAACACCACCAAATCTTAGGACAAAACTGCCTGAACGGCCACTATCTGCTGGTAGATCACGGCCAGGCATGGCTTTAGGAGTAAGATCAACCTCAAATACTGAACCATCAGCTGCCTCAGCTCCTGTAAAGAAGGTGTCTGTGCCTGCTATGAGTCGAAGTAAATTTTCTGATGCACCATCCAGGACACCTACTCTCACAAATGGACGCCAAAACAGACAGAGTGAGAGGTCTACTGTGGATAGTCAACCTAGTAAAGTCTCCAGGCCTGCCACAGGGACAGATAATGGATTTGGGATGACGATGTCAAAGAAGTCACTTGACATGGCAATCAGGCACATGGACATTCGGCAGAACTTGGGTGGAATCCGTGGCGCATCCCTCTTCCCGCATAGCATCCGCTCAACCGCCGGCAAGGGCAGGCCAGCTCGAATGTCAGATCCTGGGCACACCATCTCAAACGGAGACCACCGGCACTACGCCGACAATGGCAGCACCAACGGGCACTTCTCCGGGGACTCCAATGGGGCTCTCTCGCGCAACGGTGGCAGCTCGACCGACTCACCCGACCGGGGAAGCATCGGAGGCAAGGAGACGCTGAGCGAGCTGGACATGTACGGCAGCTCGCGCTACGAGGCGATGCTGCTGAGGGAGGACGTGAGGAACACGAGCTGGCTGCACGGCTTCGACGACAGCAAGCCCGACCAGAGCCCACTGTTCGACCACCGGTTCGAGCCGCTCCCAGAGCCCTTCAGCCCGCTATGACGAATGCACGGTTGCCGCTGCCTGTAAATCTGCTGTTCCATGGTCTGCTTTGCAAGATGTGTATGCCATTCCATATGTTTTCTGTTTGGTTCTGTTTCAGGTTCTACACGCTCTTCCCTTGGGTACAATACTCTGCTGGTAATATTTTACTTTACCGATATAAGACGGAGAGATTGTGGGGTGTGGCTCATTTAATTTATCCCTGGAGTAGGGATTGGTTTCCACGTACTGTTGTACTGAGAATCCACAAGAGTATAGGAATTGATAAAAACAGTAAAGATTTGTAAGTTATTGTAATGCCATTGG]

[+] EMBL AK102461             [CAAGGCAGCGTGAGGAGGAGGAGGAGGGGAGCTCAGCTCACGCAGAGGCGACGACGACGCGCACGCGCACCGCCCTCCTCCCTCCCCGCGATCTCGCCGTAGGGGATCTCGTCGGCGGCGAGGAAGCAAAGGCCGAGGGGGCAGCGGCTGGGGAGGGGAGGGGAGGGGAGAGCGGCATTGGTTGGAGCTTGGAGGAAGTTGGGTGTGTGTGTCTGGGGGTGAGGGTGAGGGATCGGATCGAAGCTTCTGGAAGGTTCCGGGCGCGGATCCGGCTCGGTGGGTTGCTCGCTCGTGGCTGGAGGTAGCGGCGCGCTGTTTGAGCGGGGGGAGCAACTCTGAGGTTTGGTTTTCCTGAGATGGAGGACCTGCTGGGCGCGGAGGTCGGCAAGAACGACTATGACTGGCTTCTTACTCCCCCTGGGACACCCCGTTGTCCTGTACTGGAGGTTGCTGAGAAAACACCATCCCCAAATATATTACCTAAGCGCACTGCCACTAGATCATCGTCAACCACCAGAGCGTCGAGGCTTTCAGTATCTCAAACAGAGAATGGTCATTCTACAGCTCCCACTAGACCAGCTAGAAGTAACTCTGTCACTCGCCCTTCTATTCAGTCCACTCTCATGTCTAGCTCCAACAGGACAGCAGTTCTCAATACAAGCATTTCCTCCGTCAGCTCAAGACCTACAACCCCAAGTAGGCGAAGCAGCACTGTTGTTGCACCAAAGCAATCAATTGCAGCTTCACGCCCTGTTCCAGCAAGGTCCTCCACTCCTGTTAAAACTCGTCCATCTACACCAACCAAAACTCGCCCATCTACTCCTGTGAGAACTCGTCAAACAGCCAATTCTACAAGCGACTCAGCTGCTGCCAGGACCACATCCGCTCAAAATTCAAGGCCATCAACGCCAACCTCTAGATCACGTGCTATGCCCAATTCATCTTCTGGTGCAATTCCTGCAATGAGCCGCCCAGGTGCATCTACAATTTCTGCAACAAGTCGCTCAAATGCATCTACAATATCTGCAACAAGCCGTCCTGGCTCATCCTCAAGTAATGTACCTGGGATAAGCCGTGCCACCTCATTGTCTTCAAGTACAGTTCCTTCAATGAGCCGCTCCAGCTCACGTTCATCCACACCTACACGCCAGCCTGCAATGCGCTCATCGGCCCCTGCTGTTGGTCGCTCGCCTTCTGTTGGGCGGAGTTCTAGCATCAGTAGCTTGACATCATCTATCAATCGACCTGCAGCAAATGGTGGCCGGAACTCAGCACCTTCATCGGCTCCGTCATCTCGTCCAAGTTCCCCTGGTCCACGACCTCGAGCTCCAGTTCGTCCACTTGATATCCCTGATTTTCCAAATGAAACACCACCAAATCTTAGGACAAAACTGCCTGAACGGCCACTATCTGCTGGTAGATCACGGCCAGGCATGGCTTTAGGAGTAAGATCAACCTCAAATACTGAACCATCAGCTGCCTCAGCTCCTGTAAAGAAGGTGTCTGTGCCTGCTATGAGTCGAAGTAAATTTTCTGATGCACCATCCAGGACACCTACTCTCACAAATGGACGCCAAAACAGACAGAGTGAGAGGTCTACTGTGGATAGTCAACCTAGTAAAGTCTCCAGGCCTGCCACAGGGACAGATAATGGATTTGGGATGACGATGTCAAAGAAGTCACTTGACATGGCAATCAGGCACATGGACATTCGGCAGAACTTGGGTGGAATCCGTGGCGCATCCCTCTTCCCGCATAGCATCCGCTCAACCGCCGGCAAGGGCAGGCCAGCTCGAATGTCAGATCCTGGGCACACCATCTCAAACGGAGACCACCGGCACTACGCCGACAATGGCAGCACCAACGGGCACTTCTCCGGGGACTCCAATGGGGCTCTCTCGCGCAACGGTGGCAGCTCGACCGACTCACCCGACCGGGGAAGCATCGGAGGCAAGGAGACGCTGAGCGAGCTGGACATGTACGGCAGCTCGCGCTACGAGGCGATGCTGCTGAGGGAGGACGTGAGGAACACGAGCTGGCTGCACGGCTTCGACGACAGCAAGCCCGACCAGAGCCCACTGTTCGACCACCGGTTCGAGCCGCTCCCAGAGCCCTTCAGCCCGCTATGACGAATGCACGGTTGCCGCTGCCTGTAAATCTGCTGTTCCATGGTCTGCTTTGCAAGATGTGTATGCCATTCCATATGTTTTCTGTTTGGTTCTGTTTCAGGTTCTACACGCTCTTCCCTTGGGTACAATACTCTGCTGGTAATATTTTACTTTACCGATATAAGACGGAGAGATTGTGGGGTGTGGCTCATTTAATTTATCCCTGGAGTAGGGATTGGTTTCCACGTACTGTTGTACTGAGAATCCACAAGAGTATAGGAATTGATAAAAACAGTAAAGATTTGTAAGTTATTGTAATGCCATTGG]
[-] EMBL CA763474             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATAGTCAACCTAGTAAAGTCTCCAGGCCTGCCACAGAGACAGATAATGGATTTGGGATGTCAATGTCAAAGAAGTCCCTTGCCATGGCAATCAGGCACATGGGCATTAGGCAGAACTTGGGTGGAATCCGTGGCGCATCCCTCTTTAGGAATAGCATCCGCTCAACCAAGGGCAAGGGCAGTCCAGCTCGAATGTCAGATCCTGGGCTCTCCATCTCAAACGGAGACCACTGGCACTACACCGACAATGGCAGCACCAACGGGCACTTGTCCGGGGACTCCAATGGGGCTCTCTCGCGCAACGGTGGCAGCTCGTCCGACTCACCCGACCGGGTAAGCATCGGAGGCAAGGAGACGCTGAGCGACCTGGACATGTGCGGCAGCTCGCGGTACAAGGCGATGATGCTGAGGGAGAACGTGAGGAACACGAGCTGGGTGCTCGGCTTCAACAACAGCAAGCCCGACCAGAGCCCACTGTTCGACTTCCGGTTCGAGCCGCTCCCAGAGCCCTTCAGACCGCTATGACGAATGCACGGTTGCCGCTGCCTGTAAATTTGCTGTTCCATGGTTTGCTTTGCAAGATGTGTATGCCATTCCATATGTTTTGTGTTTGGTTCAGTTTCAGGTTCTACACGCTCTTGCCTCGGGTACAATACTGTGCTGGTAATATTTTCCTTTACCGATAAAAaaaaaa                                                                                                                                         ]
[+] EMBL OSC24861             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGACATGGCAATCAGGCACATGGACATTCGGCAGAACTTGGGTGGAATCCGTGGCGCATCCCTCTTCCCGCATAGCATCCGCTCAACCGCCGGCAAGGGCAGGCCAGCTCGAATGTCAGATCCTGGGCACACCATCTCAAACGGAGACCACCGGCACTACGCCGACAATGGCAGCACCAACGGGCACTTCTCCGGGGACTCCAATGGGGCTCTCTCGCGCAACGGTGGCAGCTCGACCGACTCACCCGACCGGGGAAGCATCGGAGGCAAGGAGACGCTGAGCGAGCTGGGCATGTACGGCAGCTCGCGCTACGAGGCGATGCTGCTGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_4244#0
CAAGGCAGCGTGAGGAGGAGGAGGAGGGGAGCTCAGCTCACGCAGAGGCGACGACGACGC
GCACGCGCACCGCCCTCCTCCCTCCCCGCGATCTCGCCGTAGGGGATCTCGTCGGCGGCG
AGGAAGCAAAGGCCGAGGGGGCAGCGGCTGGGGAGGGGAGGGGAGGGGAGAGCGGCATTG
GTTGGAGCTTGGAGGAAGTTGGGTGTGTGTGTCTGGGGGTGAGGGTGAGGGATCGGATCG
AAGCTTCTGGAAGGTTCCGGGCGCGGATCCGGCTCGGTGGGTTGCTCGCTCGTGGCTGGA
GGTAGCGGCGCGCTGTTTGAGCGGGGGGAGCAACTCTGAGGTTTGGTTTTCCTGAGATGG
AGGACCTGCTGGGCGCGGAGGTCGGCAAGAACGACTATGACTGGCTTCTTACTCCCCCTG
GGACACCCCGTTGTCCTGTACTGGAGGTTGCTGAGAAAACACCATCCCCAAATATATTAC
CTAAGCGCACTGCCACTAGATCATCGTCAACCACCAGAGCGTCGAGGCTTTCAGTATCTC
AAACAGAGAATGGTCATTCTACAGCTCCCACTAGACCAGCTAGAAGTAACTCTGTCACTC
GCCCTTCTATTCAGTCCACTCTCATGTCTAGCTCCAACAGGACAGCAGTTCTCAATACAA
GCATTTCCTCCGTCAGCTCAAGACCTACAACCCCAAGTAGGCGAAGCAGCACTGTTGTTG
CACCAAAGCAATCAATTGCAGCTTCACGCCCTGTTCCAGCAAGGTCCTCCACTCCTGTTA
AAACTCGTCCATCTACACCAACCAAAACTCGCCCATCTACTCCTGTGAGAACTCGTCAAA
CAGCCAATTCTACAAGCGACTCAGCTGCTGCCAGGACCACATCCGCTCAAAATTCAAGGC
CATCAACGCCAACCTCTAGATCACGTGCTATGCCCAATTCATCTTCTGGTGCAATTCCTG
CAATGAGCCGCCCAGGTGCATCTACAATTTCTGCAACAAGTCGCTCAAATGCATCTACAA
TATCTGCAACAAGCCGTCCTGGCTCATCCTCAAGTAATGTACCTGGGATAAGCCGTGCCA
CCTCATTGTCTTCAAGTACAGTTCCTTCAATGAGCCGCTCCAGCTCACGTTCATCCACAC
CTACACGCCAGCCTGCAATGCGCTCATCGGCCCCTGCTGTTGGTCGCTCGCCTTCTGTTG
GGCGGAGTTCTAGCATCAGTAGCTTGACATCATCTATCAATCGACCTGCAGCAAATGGTG
GCCGGAACTCAGCACCTTCATCGGCTCCGTCATCTCGTCCAAGTTCCCCTGGTCCACGAC
CTCGAGCTCCAGTTCGTCCACTTGATATCCCTGATTTTCCAAATGAAACACCACCAAATC
TTAGGACAAAACTGCCTGAACGGCCACTATCTGCTGGTAGATCACGGCCAGGCATGGCTT
TAGGAGTAAGATCAACCTCAAATACTGAACCATCAGCTGCCTCAGCTCCTGTAAAGAAGG
TGTCTGTGCCTGCTATGAGTCGAAGTAAATTTTCTGATGCACCATCCAGGACACCTACTC
TCACAAATGGACGCCAAAACAGACAGAGTGAGAGGTCTACTGTGGATAGTCAACCTAGTA
AAGTCTCCAGGCCTGCCACAGGGACAGATAATGGATTTGGGATGACGATGTCAAAGAAGT
CACTTGACATGGCAATCAGGCACATGGACATTCGGCAGAACTTGGGTGGAATCCGTGGCG
CATCCCTCTTCCCGCATAGCATCCGCTCAACCGCCGGCAAGGGCAGGCCAGCTCGAATGT
CAGATCCTGGGCACACCATCTCAAACGGAGACCACCGGCACTACGCCGACAATGGCAGCA
CCAACGGGCACTTCTCCGGGGACTCCAATGGGGCTCTCTCGCGCAACGGTGGCAGCTCGA
CCGACTCACCCGACCGGGGAAGCATCGGAGGCAAGGAGACGCTGAGCGAGCTGGACATGT
ACGGCAGCTCGCGCTACGAGGCGATGCTGCTGAGGGAGGACGTGAGGAACACGAGCTGGC
TGCACGGCTTCGACGACAGCAAGCCCGACCAGAGCCCACTGTTCGACCACCGGTTCGAGC
CGCTCCCAGAGCCCTTCAGCCCGCTATGACGAATGCACGGTTGCCGCTGCCTGTAAATCT
GCTGTTCCATGGTCTGCTTTGCAAGATGTGTATGCCATTCCATATGTTTTCTGTTTGGTT
CTGTTTCAGGTTCTACACGCTCTTCCCTTGGGTACAATACTCTGCTGGTAATATTTTACT
TTACCGATATAAGACGGAGAGATTGTGGGGTGTGGCTCATTTAATTTATCCCTGGAGTAG
GGATTGGTTTCCACGTACTGTTGTACTGAGAATCCACAAGAGTATAGGAATTGATAAAAA
CAGTAAAGATTTGTAAGTTATTGTAATGCCATTGG
clustalw multiple alignements is not computed in this case