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Oryza sativa
cluster # 4276 cluster # 4276       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4276#0 length = 2691 sequences # 3  

consensusID : consensus_4276#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2691
fasta sequence
                              [GGCATTGTAACGAACACCTCACGCGCACACCCTCCCCTCCCCACGGCGGCGGCGGCGGCGGCGCGTGCAGCCGGCGATTCCGCCTCTCCTCCAAACTCCGGCGGCCCACCGGCCCCGACCTCGCCGCCGCGATGAAGTTCGACCTGGAGGGCCTGACGGTGCACTTCCCGTACGCGGCGATCTACCCGGAGCAGCACGCGTACATGGGCGAGCTGAAGCGCGCCCTCGACGCGCGCGGCCACGCGCTGCTCGAGATGCCGACGGGCACCGGCAAGACGTCGGCGCTCATCTCCCTCATCACCTCCTACTCCCTCGCCAGCCCGTCCCGCCCGCTCCGCCTCATCTACTGCACCCGCACCGTCCACGAGATGGAGAAGACCCTCGCCGAGCTCCGCCTCCTCTTCGCCCACCTCCCCGCCGCCGCCTCCCGCTCCCTCCTCGCCCTCGGCCTCTCCTCCCGCAAGAACCTCTGCGTCCACCCCCAGGCCTCCGCCGCCGCCGCCCGCGACTCCGTCGACACCGCCTGCCGCCGCCTCACCGCGTCCTGGGTGCGCGACAGGGCCGCCTCCGACCCGGACTCCACCCCGCTCTGCGACTTCTTCGAGTCCTTCGACCGCGCCGCCGCCGCCGGTGACCTCGCCTCCTACATGCCCCCCGGCGTCTACACCCTCGCCGACCTCCGCGCCCTCGGCCGCGACCGCGGGATCTGCCCCTACTTCCTCGCGAGGCAGATGGTCAAGTACGCCAATGTCGTGGTCTACAGCTACCAGTACCTGATTGATCCCAAGGTGGCCAGCATTGTGTCCAGGGAGATGCAGAAGGAGTGCGTCGTCGTCTTCGACGAGGCGCACAACATCGATAATGTCTGCATTGAGGCTCTCAGTGTCAGCATCCGCAAGCAGACGCTCGAAGGTGCCGAGCGAAACTTGCGGCGCATCTCGCAAGAGATCGATAGGTTCAAGGCCACTGATGCCAATAGGCTTCGTGCTGAATACAACAGGCTGGTTGATGGATTGGCACAGAGGGGAAACCTGCCAATATCGGATGCTTGGCTCGCGAACCCGGCCTTGCCTGAGGACATTCTGAAGGAGGCTGTACCAGGAAACATCAGGAGGGCTGAGCATTTTCTTGCTGTTTTGCGGAGGCTTGTCAGGTTCCTAGATGGACGCCTGGAAACAGAGAATGTTGAGAATGAAATGCCTGTTGCCTTTGTTGCTTCAATCCATTCCCAGGCTGGAATTGACCAGAAAATGTTAAGGTTTTGTTATGATCGGCTACACTCTCTAATGCTTACCTTGGAGATAACCGATACAGATGAGTTCATGCACATCCAGACAATTTGTGACTTTGCCACATTGATTGGAACTTATACACGGGGCTTTTCTATAATAATAGAACCCTATGATGAGAGAATGCCTGATATCCGTGATCCTGTGATTCAGCTCAGTTGCCATGATGCATCGCTTGCAATACAGCCTGTTTTTGAGCGTTTTCAAACAGTAGTCATAACTTCTGGTACTCTCAGCCCAATAGACCTCTACCCTCGCCTTTTGAACTTTAATCCTGTTATAAGCAGGAGCTTCACAATGTCTTTAACAAGGGATTGCACATGTCCCATGGTCTTGACAAGAGGAAGTGACCAGCTACCTGTCAGTACAAAGTTTGATATGCGTAGCGATCCTGGCGTTGTAAGGAATTATGGTCGGCTCTTGCTGGAGATGGCTTCTGCTGTGCCAGATGGCATAGTTTGTTTTTTTGTCAGTTACTCTTATATGGATGGCATTGTCAACAGCTGGAATGAGATGGGTATTTTGCAGGACATCATGCAGCATAAGTTGGTATTCATTGAAACACCAGATGTTGTTGAGACAACATTGGCTCTTGATAATTACAGAAAGGCATGTGATTGTGGAAGAGGTGCTATATTCTTTTCCGTTGCCAGGGGCAAAGTAGCCGAAGGTATTGATTTTGATCGACACTATGGCAGACTTGTGATCATGTTTGGTGTTCCTTTCCAGTACACACTCAGCAGGATATTACTTGCTAGGTTGGAGTACCTAAGAGAAACTTTTCAAATAAAGGAGGGTGACTTCCTGACCTTCGATGCTTTGAGGCAAGCTGCGCAATGTGTTGGCCGTGTGATCCGTTCTAAAGCAGATTATGGAATGATGATATTTGCTGACAAGAGATACAGTCGCCATGATAAACGGTCTAAACTGCCTGGGTGGATACTGTCACACTTACATGATGCGC-ACCTAAATCTGAGCACTGATATGGCTTTGCATATAGCTCGTGAGTTCCTACGGAGGATGGCGCAGCCTTACGATAAGACGGGGAGCGGCGGCAACAAGACTCTCTTAACCGAAGAGGATTTGCAGAATATGGCGCAGGACGCCATGGAGATGTGAAACCATGAAAGAAATTGAAAGAGAGGGAGGGGGAGAGAGAGTTTTCTGCTGTACAATACATTCAAAATTGAGGTAGAAGTCACTAATGTACAAAAAAATTTTGGCTACTCATGTGAACCAGCATGAATTCGAGCTGCACGGTTCATGCTAAATTGCTAACAAATTGGTCCTTCCAAGCACATGTGATATTACTCTGCATCTGATATAGGTATGTACACCTTAAAGTCCTTCCGGATACTTATATCTGAATATGATGGCGGCCTCTGAATTTCAGACGTGTCGT]

[+] EMBL AK099724             [GGCATTGTAACGAACACCTCACGCGCACACCCTCCCCTCCCCACGGCGGCGGCGGCGGCGGCGCGTGCAGCCGGCGATTCCGCCTCTCCTCCAAACTCCGGCGGCCCACCGGCCCCGACCTCGCCGCCGCGATGAAGTTCGACCTGGAGGGCCTGACGGTGCACTTCCCGTACGCGGCGATCTACCCGGAGCAGCACGCGTACATGGGCGAGCTGAAGCGCGCCCTCGACGCGCGCGGCCACGCGCTGCTCGAGATGCCGACGGGCACCGGCAAGACGTCGGCGCTCATCTCCCTCATCACCTCCTACTCCCTCGCCAGCCCGTCCCGCCCGCTCCGCCTCATCTACTGCACCCGCACCGTCCACGAGATGGAGAAGACCCTCGCCGAGCTCCGCCTCCTCTTCGCCCACCTCCCCGCCGCCGCCTCCCGCTCCCTCCTCGCCCTCGGCCTCTCCTCCCGCAAGAACCTCTGCGTCCACCCCCAGGCCTCCGCCGCCGCCGCCCGCGACTCCGTCGACACCGCCTGCCGCCGCCTCACCGCGTCCTGGGTGCGCGACAGGGCCGCCTCCGACCCGGACTCCACCCCGCTCTGCGACTTCTTCGAGTCCTTCGACCGCGCCGCCGCCGCCGGTGACCTCGCCTCCTACATGCCCCCCGGCGTCTACACCCTCGCCGACCTCCGCGCCCTCGGCCGCGACCGCGGGATCTGCCCCTACTTCCTCGCGAGGCAGATGGTCAAGTACGCCAATGTCGTGGTCTACAGCTACCAGTACCTGATTGATCCCAAGGTGGCCAGCATTGTGTCCAGGGAGATGCAGAAGGAGTGCGTCGTCGTCTTCGACGAGGCGCACAACATCGATAATGTCTGCATTGAGGCTCTCAGTGTCAGCATCCGCAAGCAGACGCTCGAAGGTGCCGAGCGAAACTTGCGGCGCATCTCGCAAGAGATCGATAGGTTCAAGGCCACTGATGCCAATAGGCTTCGTGCTGAATACAACAGGCTGGTTGATGGATTGGCACAGAGGGGAAACCTGCCAATATCGGATGCTTGGCTCGCGAACCCGGCCTTGCCTGAGGACATTCTGAAGGAGGCTGTACCAGGAAACATCAGGAGGGCTGAGCATTTTCTTGCTGTTTTGCGGAGGCTTGTCAGGTTCCTAGATGGACGCCTGGAAACAGAGAATGTTGAGAATGAAATGCCTGTTGCCTTTGTTGCTTCAATCCATTCCCAGGCTGGAATTGACCAGAAAATGTTAAGGTTTTGTTATGATCGGCTACACTCTCTAATGCTTACCTTGGAGATAACCGATACAGATGAGTTCATGCACATCCAGACAATTTGTGACTTTGCCACATTGATTGGAACTTATACACGGGGCTTTTCTATAATAATAGAACCCTATGATGAGAGAATGCCTGATATCCGTGATCCTGTGATTCAGCTCAGTTGCCATGATGCATCGCTTGCAATACAGCCTGTTTTTGAGCGTTTTCAAACAGTAGTCATAACTTCTGGTACTCTCAGCCCAATAGACCTCTACCCTCGCCTTTTGAACTTTAATCCTGTTATAAGCAGGAGCTTCACAATGTCTTTAACAAGGGATTGCACATGTCCCATGGTCTTGACAAGAGGAAGTGACCAGCTACCTGTCAGTACAAAGTTTGATATGCGTAGCGATCCTGGCGTTGTAAGGAATTATGGTCGGCTCTTGCTGGAGATGGCTTCTGCTGTGCCAGATGGCATAGTTTGTTTTTTTGTCAGTTACTCTTATATGGATGGCATTGTCAACAGCTGGAATGAGATGGGTATTTTGCAGGACATCATGCAGCATAAGTTGGTATTCATTGAAACACCAGATGTTGTTGAGACAACATTGGCTCTTGATAATTACAGAAAGGCATGTGATTGTGGAAGAGGTGCTATATTCTTTTCCGTTGCCAGGGGCAAAGTAGCCGAAGGTATTGATTTTGATCGACACTATGGCAGACTTGTGATCATGTTTGGTGTTCCTTTCCAGTACACACTCAGCAGGATATTACTTGCTAGGTTGGAGTACCTAAGAGAAACTTTTCAAATAAAGGAGGGTGACTTCCTGACCTTCGATGCTTTGAGGCAAGCTGCGCAATGTGTTGGCCGTGTGATCCGTTCTAAAGCAGATTATGGAATGATGATATTTGCTGACAAGAGATACAGTCGCCATGATAAACGGTCTAAACTGCCTGGGTGGATACTGTCACACTTACATGATGCGC ACCTAAATCTGAGCACTGATATGGCTTTGCATATAGCTCGTGAGTTCCTACGGAGGATGGCGCAGCCTTACGATAAGACGGGGAGCGGCGGCAACAAGACTCTCTTAACCGAAGAGGATTTGCAGAATATGGCGCAGGACGCCATGGAGATGTGAAACCATGAAAGAAATTGAAAGAGAGGGAGGGGGAGAGAGAGTTTTCTGCTGTACAATACATTCAAAATTGAGGTAGAAGTCACTAATGTACAAAAAAATTTTGGCTACTCATGTGAACCAGCATGAATTCGAGCTGCACGGTTCATGCTAAATTGCTAACAAATTGGTCCTTCCAAGCACATGTGATATTACTCTGCATCTGATATAGGTATGTACACCTTAAAGTCCTTCCGGATACTTATATCTGAATATGATGGCGGCCTCTGAATTTCAGACGTGTCGT]
[+] EMBL CA999851             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AACATCAGGAGGGCTGAGCATTTTCTTGCTGTTTTGCGGAGGCTTGTCAGGTTCCTAGATGGACGCCTGGAAACAGAGAATGTTGAGAATGAAATGCCTGTTGCCTTTGTTGCTTCAATCCATTCCCAGGCTGGAATTGACCAGAAAATGTTAAGGTTTTGTTATGATCGGCTACACTCTCTAATGCTTACCTTGGAGATAACCGATACAGATGAGTTCATGCACATCCAGACAATTTGTGACTTTGCCACATTGATTGGAACTTATACACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA755118             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAACAGCTGGAATGAGATGGGTATTTTGCAGGACATCATGCAGCATAAGTTGGTATTCATTGAAACACCAGATGTTGTTGAGACAACATTGGCTCTTGATAATTACAGAAAGGCATGTGATTGTGGAAGAGGTGCTATATTCTTTTCCGTTGCCAGGGGCAAAGTAGCCGAAGGTATTGATTTTGATCGACACTATGGCAGACTTGTGATCATGTTTGGTGTTCCTTTCCAGTACACACTCAGCAGGATATTACTTGCTAGGTTGGAGTACCTAAGAGAAACTTTTCAAATAAAGGAGGGTGACTTCCTGACCTTCGATGCTTTGAGGCAAGCTGCGCAATGTGTTGGCCGTGTGATCCGTTCTAAAGCAGATTATGGAATGATGATATTTGCTGACAAGAGATACAGTCGCCATGATAAACGGTCTAAACTGCCTGNGTGGATACTGTCACACTTACATGATGCGCNACCT AATCTGAGCACTGATATGGCTTTGCATATAGCTCGTGAGTTCCTACGGAGGATGGCGCAACCTTACCATAAGACCGGGAGCGGCGGCNACAAGACTCTCTTAACCGAAGAGGATTTGCAGAATA                                                                                                                                                                                                                                                                                                                     ]


>consensus_4276#0 GGCATTGTAACGAACACCTCACGCGCACACCCTCCCCTCCCCACGGCGGCGGCGGCGGCG GCGCGTGCAGCCGGCGATTCCGCCTCTCCTCCAAACTCCGGCGGCCCACCGGCCCCGACC TCGCCGCCGCGATGAAGTTCGACCTGGAGGGCCTGACGGTGCACTTCCCGTACGCGGCGA TCTACCCGGAGCAGCACGCGTACATGGGCGAGCTGAAGCGCGCCCTCGACGCGCGCGGCC ACGCGCTGCTCGAGATGCCGACGGGCACCGGCAAGACGTCGGCGCTCATCTCCCTCATCA CCTCCTACTCCCTCGCCAGCCCGTCCCGCCCGCTCCGCCTCATCTACTGCACCCGCACCG TCCACGAGATGGAGAAGACCCTCGCCGAGCTCCGCCTCCTCTTCGCCCACCTCCCCGCCG CCGCCTCCCGCTCCCTCCTCGCCCTCGGCCTCTCCTCCCGCAAGAACCTCTGCGTCCACC CCCAGGCCTCCGCCGCCGCCGCCCGCGACTCCGTCGACACCGCCTGCCGCCGCCTCACCG CGTCCTGGGTGCGCGACAGGGCCGCCTCCGACCCGGACTCCACCCCGCTCTGCGACTTCT TCGAGTCCTTCGACCGCGCCGCCGCCGCCGGTGACCTCGCCTCCTACATGCCCCCCGGCG TCTACACCCTCGCCGACCTCCGCGCCCTCGGCCGCGACCGCGGGATCTGCCCCTACTTCC TCGCGAGGCAGATGGTCAAGTACGCCAATGTCGTGGTCTACAGCTACCAGTACCTGATTG ATCCCAAGGTGGCCAGCATTGTGTCCAGGGAGATGCAGAAGGAGTGCGTCGTCGTCTTCG ACGAGGCGCACAACATCGATAATGTCTGCATTGAGGCTCTCAGTGTCAGCATCCGCAAGC AGACGCTCGAAGGTGCCGAGCGAAACTTGCGGCGCATCTCGCAAGAGATCGATAGGTTCA AGGCCACTGATGCCAATAGGCTTCGTGCTGAATACAACAGGCTGGTTGATGGATTGGCAC AGAGGGGAAACCTGCCAATATCGGATGCTTGGCTCGCGAACCCGGCCTTGCCTGAGGACA TTCTGAAGGAGGCTGTACCAGGAAACATCAGGAGGGCTGAGCATTTTCTTGCTGTTTTGC GGAGGCTTGTCAGGTTCCTAGATGGACGCCTGGAAACAGAGAATGTTGAGAATGAAATGC CTGTTGCCTTTGTTGCTTCAATCCATTCCCAGGCTGGAATTGACCAGAAAATGTTAAGGT TTTGTTATGATCGGCTACACTCTCTAATGCTTACCTTGGAGATAACCGATACAGATGAGT TCATGCACATCCAGACAATTTGTGACTTTGCCACATTGATTGGAACTTATACACGGGGCT TTTCTATAATAATAGAACCCTATGATGAGAGAATGCCTGATATCCGTGATCCTGTGATTC AGCTCAGTTGCCATGATGCATCGCTTGCAATACAGCCTGTTTTTGAGCGTTTTCAAACAG TAGTCATAACTTCTGGTACTCTCAGCCCAATAGACCTCTACCCTCGCCTTTTGAACTTTA ATCCTGTTATAAGCAGGAGCTTCACAATGTCTTTAACAAGGGATTGCACATGTCCCATGG TCTTGACAAGAGGAAGTGACCAGCTACCTGTCAGTACAAAGTTTGATATGCGTAGCGATC CTGGCGTTGTAAGGAATTATGGTCGGCTCTTGCTGGAGATGGCTTCTGCTGTGCCAGATG GCATAGTTTGTTTTTTTGTCAGTTACTCTTATATGGATGGCATTGTCAACAGCTGGAATG AGATGGGTATTTTGCAGGACATCATGCAGCATAAGTTGGTATTCATTGAAACACCAGATG TTGTTGAGACAACATTGGCTCTTGATAATTACAGAAAGGCATGTGATTGTGGAAGAGGTG CTATATTCTTTTCCGTTGCCAGGGGCAAAGTAGCCGAAGGTATTGATTTTGATCGACACT ATGGCAGACTTGTGATCATGTTTGGTGTTCCTTTCCAGTACACACTCAGCAGGATATTAC TTGCTAGGTTGGAGTACCTAAGAGAAACTTTTCAAATAAAGGAGGGTGACTTCCTGACCT TCGATGCTTTGAGGCAAGCTGCGCAATGTGTTGGCCGTGTGATCCGTTCTAAAGCAGATT ATGGAATGATGATATTTGCTGACAAGAGATACAGTCGCCATGATAAACGGTCTAAACTGC CTGGGTGGATACTGTCACACTTACATGATGCGCACCTAAATCTGAGCACTGATATGGCTT TGCATATAGCTCGTGAGTTCCTACGGAGGATGGCGCAGCCTTACGATAAGACGGGGAGCG GCGGCAACAAGACTCTCTTAACCGAAGAGGATTTGCAGAATATGGCGCAGGACGCCATGG AGATGTGAAACCATGAAAGAAATTGAAAGAGAGGGAGGGGGAGAGAGAGTTTTCTGCTGT ACAATACATTCAAAATTGAGGTAGAAGTCACTAATGTACAAAAAAATTTTGGCTACTCAT GTGAACCAGCATGAATTCGAGCTGCACGGTTCATGCTAAATTGCTAACAAATTGGTCCTT CCAAGCACATGTGATATTACTCTGCATCTGATATAGGTATGTACACCTTAAAGTCCTTCC GGATACTTATATCTGAATATGATGGCGGCCTCTGAATTTCAGACGTGTCGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)