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Oryza sativa
cluster # 4279 cluster # 4279       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4279#0 length = 1604 sequences # 3  

consensusID : consensus_4279#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1604
fasta sequence
                              [CAGAGTTATGCGTCAGGAGCAGGGATTAATCGCCTACAGTAGTTATTAATCTTGTTGTTTTGTTCTTCAGAAATCAGGAGGAGAAGCCATGATGCAGAAATATCTGTGGATACAGATTTTTGTGTTGCTCTCGAGCTTCTCCTTCTCGGTTGAGACGGATTACGCCTCCATTTTTAGCTTCGGAGATTCCTTCTCCGACACCGGCAACATCGTCCTCATCTACGGTCCGGCGAGAACCGACCTCGTGATGACCAAACCGCCGTACGGAATGACATTCTTTGACCATCCCAGCGGCCGCCTCTCCGATGGAAGATTGATCATCGATTTCATCGCCGAAGCGCTGGGGCTCCCTCTGCTTCCGCCGTCGTTCGCGGCGAACCGGAGCTTCGAGCATGGCGCCAACTTCGCGACGGCCGGCGGCACGGCGCTGGACCGCGCGTTCTTCGTGGCCAACAACTTCACGGTGATGTCCCCGTTCAACATCTCGCTCGGCGACCAGCTCGGGTGGCTCGACGGCATGAAACCGTCGCTCTGCGGCTGCAAGCCAGGTGGGTGCGAGGGTTACTTCTCCGAGTCCCTGTTCTTCGTCGGCGAGCTCGGATGGAACGACTACTCCGCCGTGCTGCTCGCCGGCAGGGGCGTCGACGAGGCGAGGTCTCTCACACCCCGAGTCGTCGGAACCATCCGCGCGGCCACACAGAAACTCATCGACGGCGGCGCGAGGACGGTGTTCGTGTCGGGAATCACGCCGATGGGGTGCTCGTCAGCGAACCTCGTGCTGTTCGCGGGCTCAAGCGAAGCGGACTACGAGCCGGACACCGGCTGCCTGAGGAGCCTGAACCTGCTGTCCATGGAGCACAACCGGCAGCTACGCCACGCCCTGGCGCAGCTCGGCGGCGCGAGGATCATCTACGGCGACTTCTACACCCCCCTCGTCGAGCTCGCCGCGACGCCGCGCCGCTTCGGTGAGCCGCGCCATAGCTCAGACCTCAGAGCTAATTAAGCTTCTGGATTTTCATGTCACCGGAACATATATATGGCGGCGCAGGGATCGACGGGGAGGAGGGCGCGCTGAGAGCTTGCTGCGGCAGCGGCGGTGGGCGGTACAACTTCGAGTTCAACATGAGCGCGCAGTGCGGCATGGCGGGGGTGACCGTGTGCGGCGACCCGTCGGTGTACGTGAACTGGGACGGCGTGCACCTCACCGAGGCGGCGTACCACCACGTCGCCGATGGGTGGCTAAGGGGGCCGTACGCGAACCCGCCCCTACTCAGCTCGTCGTGTTCGGCGCGAGCGCGGTAGCCGCGGCGAGTTGAGGCCTTCTCCCTTCTTCGGCGTGGGCCTTCTCGTGGTCGTCTCTTTACATGTTGGTAGTAGGAATAAGTTCACTCCAGGTCCCTCAATTTGTCGCCCAGTCTGATTTTCATCCTCAGTGCAGAAAACCGGATACAACACATCCCTTAACTTATAAAACTGTACAGAAGAGGTCCCTCGACAGTATTGTGGCCGGTTTTGGATGATGTTGCATATACGTGGCTCCCTTTGACTAGGTCCTCATCCCACGTGGCATTGACGTGGCGTTTTGATCCGAAAAGAAATAAAGG]

[+] EMBL AK102384             [CAGAGTTATGCGTCAGGAGCAGGGATTAATCGCCTACAGTAGTTATTAATCTTGTTGTTTTGTTCTTCAGAAATCAGGAGGAGAAGCCATGATGCAGAAATATCTGTGGATACAGATTTTTGTGTTGCTCTCGAGCTTCTCCTTCTCGGTTGAGACGGATTACGCCTCCATTTTTAGCTTCGGAGATTCCTTCTCCGACACCGGCAACATCGTCCTCATCTACGGTCCGGCGAGAACCGACCTCGTGATGACCAAACCGCCGTACGGAATGACATTCTTTGACCATCCCAGCGGCCGCCTCTCCGATGGAAGATTGATCATCGATTTCATCGCCGAAGCGCTGGGGCTCCCTCTGCTTCCGCCGTCGTTCGCGGCGAACCGGAGCTTCGAGCATGGCGCCAACTTCGCGACGGCCGGCGGCACGGCGCTGGACCGCGCGTTCTTCGTGGCCAACAACTTCACGGTGATGTCCCCGTTCAACATCTCGCTCGGCGACCAGCTCGGGTGGCTCGACGGCATGAAACCGTCGCTCTGCGGCTGCAAGCCAGGTGGGTGCGAGGGTTACTTCTCCGAGTCCCTGTTCTTCGTCGGCGAGCTCGGATGGAACGACTACTCCGCCGTGCTGCTCGCCGGCAGGGGCGTCGACGAGGCGAGGTCTCTCACACCCCGAGTCGTCGGAACCATCCGCGCGGCCACACAGAAACTCATCGACGGCGGCGCGAGGACGGTGTTCGTGTCGGGAATCACGCCGATGGGGTGCTCGTCAGCGAACCTCGTGCTGTTCGCGGGCTCAAGCGAAGCGGACTACGAGCCGGACACCGGCTGCCTGAGGAGCCTGAACCTGCTGTCCATGGAGCACAACCGGCAGCTACGCCACGCCCTGGCGCAGCTCGGCGGCGCGAGGATCATCTACGGCGACTTCTACACCCCCCTCGTCGAGCTCGCCGCGACGCCGCGCCGCTTCGGTGAGCCGCGCCATAGCTCAGACCTCAGAGCTAATTAAGCTTCTGGATTTTCATGTCACCGGAACATATATATGGCGGCGCAGGGATCGACGGGGAGGAGGGCGCGCTGAGAGCTTGCTGCGGCAGCGGCGGTGGGCGGTACAACTTCGAGTTCAACATGAGCGCGCAGTGCGGCATGGCGGGGGTGACCGTGTGCGGCGACCCGTCGGTGTACGTGAACTGGGACGGCGTGCACCTCACCGAGGCGGCGTACCACCACGTCGCCGATGGGTGGCTAAGGGGGCCGTACGCGAACCCGCCCCTACTCAGCTCGTCGTGTTCGGCGCGAGCGCGGTAGCCGCGGCGAGTTGAGGCCTTCTCCCTTCTTCGGCGTGGGCCTTCTCGTGGTCGTCTCTTTACATGTTGGTAGTAGGAATAAGTTCACTCCAGGTCCCTCAATTTGTCGCCCAGTCTGATTTTCATCCTCAGTGCAGAAAACCGGATACAACACATCCCTTAACTTATAAAACTGTACAGAAGAGGTCCCTCGACAGTATTGTGGCCGGTTTTGGATGATGTTGCATATACGTGGCTCCCTTTGACTAGGTCCTCATCCCACGTGGCATTGACGTGGCGTTTTGATCCGAAAAGAAATAAAGG]
[+] EMBL AK059318             [ AGAGTTATGCGTCAGGAGCAGGGATTAATCGCCTACAGTAGTTATTAATCTTGTTGTTTTGTTCTTCAGAAATCAGGAGGAGAAGCCATGATGCAGAAATATCTGTGGATACAGATTTTTGTGTTGCTCTCGAGCTTCTCCTTCTCGGTTGAGACGGATTACGCCTCCATTTTTAGCTTCGGAGATTCCTTCTCCGACACCGGCAACATCGTCCTCATCTACGGTCCGGCGAGAACCGACCTCGTGATGACCAAACCGCCGTACGGAATGACATTCTTTGACCATCCCAGCGGCCGCCTCTCCGATGGAAGATTGATCATCGATTTCATCGCCGAAGCGCTGGGGCTCCCTCTGCTTCCGCCGTCGTTCGCGGCGAACCGGAGCTTCGAGCATGGCGCCAACTTCGCGACGGCCGGCGGCACGGCGCTGGACCGCGCGTTCTTCGTGGCCAACAACTTCACGGTGATGTCCCCGTTCAACATCTCGCTCGGCGACCAGCTCGGGTGGCTCGACGGCATGAAACCGTCGCTCTGCGGCTGCAAGCCAGGTGGGTGCGAGGGTTACTTCTCCGAGTCCCTGTTCTTCGTCGGCGAGCTCGGATGGAACGACTACTCCGCCGTGCTGCTCGCCGGCAGGGGCGTCGACGAGGCGAGGTCTCTCACACCCCGAGTCGTCGGAACCATCCGCGCGGCCACACAGAAACTCATCGACGGCGGCGCGAGGACGGTGTTCGTGTCGGGAATCACGCCGATGGGGTGCTCGTCAGCGAACCTCGTGCTGTTCGCGGGCTCAAGCGAAGCGGACTACGAGCCGGACACCGGCTGCCTGAGGAGCCTGAACCTGCTGTCCATGGAGCACAACCGGCAGCTACGCCACGCCCTGGCGCAGCTCGGCGGCGCGAGGATCATCTACGGCGACTTCTACACCCCCCTCGTCGAGCTCGCCGCGACGCCGCGCCGCTTCGGTGAGCCGCGCCATAGCTCAGACCTCAGAGCTAATTAAGCTTCTGGATTTTCATGTCACCGGAACATATATATGGCGGCGCAGGGATCGACGGGGAGGAGGGCGCGCTGAGAGCTTGCTGCGGCAGCGGCGGTGGGCGGTACAACTTCGAGTTCAACATGAGCGCGCAGTGCGGCATGGCGGGGGTGACCGTGTGCGGCGACCCGTCGGCGTACGTGAACTGGGACGGCGTGCACCTCACCGAGGCGGCGTACCACCACGTCGCCGATGGGTGGCTAAGGGGGCCGTACGCGAACCCGCCCCTACTCAGCTCGTCGTGTTCGGCGCGAGCGCGATAGCCGCGGCGAGTTGAGGCCTTCTCCCTTCTTCGGCGTGGGCCTTCTCGTGGTCGTCTCTTTACATGTTGGTAGTAGGAATAAGTTCACTCCAGGTCCCTCAATTTGTCGCCCAGTCTGATTTTCATCCTCAGTGCAGAAAACCGGATACAACACATCCCTTAACTTATAAAACTGTACAGAAGAGGTCCCTCGACAGTATTGTGGCCGGTTTTGGATGATGTTGCATATACGTGGCTCCCTTTGACTAGGTCCTCATCCCACGTGGCATTGACGTGGCGTTTTGATCCGAAAAGAAATAAAGG]
[+] EMBL CB683868             [         GCGTCAGGAGCAGGGATTAATCGCCTACAGTAGTTATTAATCTTGTTGTTTTGTTCTTCAGAAATCAGGAGGAGAAGCCATGATGCAGAAATATCTGTGGATACAGATTTTTGTGTTGCTCTCGAGCTTCTCCTTCTCGGTTGAGACGGATTACGCCTCCATTTTTAGCTTCGGAGATTCCTTCTCCGACACCGGCAACATCGTCCTCATCTACGGTCCGGCGAGAACCGACCTCGTGATGACCAAACCGCCGTACGGAATGACATTCTTTGACCATCCCAGCGGCCGCCTCTCCGATGGAAGATTGATCATCGATTTCATCGCCGAAGCGCTGGGGCTCCCTCTGCTTCCGCCGTCGTTCGCGGCGAACCGGAGCTTCGAGCATGGCGCCAACTTCGCGACGGCCGGCGGCACGGCGCTGGACCGCGCGTTCTTCGTGGCCAACAACTTCACGGTGATGTCCCCGTTCAACATCTCGCTCGGCGACCAGCTCGGGTGGCTCGACGGCATGAAACCGTCGCTCTGCGGCTGCAAGCCAGGTGGGTGCGAGGGTTACTTCTCCGAGTCCCTGTTCTTCGTCGGCGAGCTCGGATGGAACGACTACTCCGCCGTGCTGCTCGCCGGCAGGGGCGTCGACGAGGCGAGGTCTCTCACACCCCGAGTCGTCGGAACCATCCGCGCGGCCACACAGAAACTCATCGACGGCGGCGCGAGGACGGTGTTCGTGTCGGGAATCACGCCGATGGGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]


>consensus_4279#0 CAGAGTTATGCGTCAGGAGCAGGGATTAATCGCCTACAGTAGTTATTAATCTTGTTGTTT TGTTCTTCAGAAATCAGGAGGAGAAGCCATGATGCAGAAATATCTGTGGATACAGATTTT TGTGTTGCTCTCGAGCTTCTCCTTCTCGGTTGAGACGGATTACGCCTCCATTTTTAGCTT CGGAGATTCCTTCTCCGACACCGGCAACATCGTCCTCATCTACGGTCCGGCGAGAACCGA CCTCGTGATGACCAAACCGCCGTACGGAATGACATTCTTTGACCATCCCAGCGGCCGCCT CTCCGATGGAAGATTGATCATCGATTTCATCGCCGAAGCGCTGGGGCTCCCTCTGCTTCC GCCGTCGTTCGCGGCGAACCGGAGCTTCGAGCATGGCGCCAACTTCGCGACGGCCGGCGG CACGGCGCTGGACCGCGCGTTCTTCGTGGCCAACAACTTCACGGTGATGTCCCCGTTCAA CATCTCGCTCGGCGACCAGCTCGGGTGGCTCGACGGCATGAAACCGTCGCTCTGCGGCTG CAAGCCAGGTGGGTGCGAGGGTTACTTCTCCGAGTCCCTGTTCTTCGTCGGCGAGCTCGG ATGGAACGACTACTCCGCCGTGCTGCTCGCCGGCAGGGGCGTCGACGAGGCGAGGTCTCT CACACCCCGAGTCGTCGGAACCATCCGCGCGGCCACACAGAAACTCATCGACGGCGGCGC GAGGACGGTGTTCGTGTCGGGAATCACGCCGATGGGGTGCTCGTCAGCGAACCTCGTGCT GTTCGCGGGCTCAAGCGAAGCGGACTACGAGCCGGACACCGGCTGCCTGAGGAGCCTGAA CCTGCTGTCCATGGAGCACAACCGGCAGCTACGCCACGCCCTGGCGCAGCTCGGCGGCGC GAGGATCATCTACGGCGACTTCTACACCCCCCTCGTCGAGCTCGCCGCGACGCCGCGCCG CTTCGGTGAGCCGCGCCATAGCTCAGACCTCAGAGCTAATTAAGCTTCTGGATTTTCATG TCACCGGAACATATATATGGCGGCGCAGGGATCGACGGGGAGGAGGGCGCGCTGAGAGCT TGCTGCGGCAGCGGCGGTGGGCGGTACAACTTCGAGTTCAACATGAGCGCGCAGTGCGGC ATGGCGGGGGTGACCGTGTGCGGCGACCCGTCGGTGTACGTGAACTGGGACGGCGTGCAC CTCACCGAGGCGGCGTACCACCACGTCGCCGATGGGTGGCTAAGGGGGCCGTACGCGAAC CCGCCCCTACTCAGCTCGTCGTGTTCGGCGCGAGCGCGGTAGCCGCGGCGAGTTGAGGCC TTCTCCCTTCTTCGGCGTGGGCCTTCTCGTGGTCGTCTCTTTACATGTTGGTAGTAGGAA TAAGTTCACTCCAGGTCCCTCAATTTGTCGCCCAGTCTGATTTTCATCCTCAGTGCAGAA AACCGGATACAACACATCCCTTAACTTATAAAACTGTACAGAAGAGGTCCCTCGACAGTA TTGTGGCCGGTTTTGGATGATGTTGCATATACGTGGCTCCCTTTGACTAGGTCCTCATCC CACGTGGCATTGACGTGGCGTTTTGATCCGAAAAGAAATAAAGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)