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Oryza sativa
cluster # 4305 cluster # 4305       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4305#0 length = 1330 sequences # 3  

consensusID : consensus_4305#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1330
fasta sequence
                              [AAAAAACAATCGACCACAGCCTTACCTGGTGCTGGTGAGGTGAGCAGAGCTATCCCAATTCCAATTCCAATTCACAATTCCCAAAGTGGAGGAGAAGATGGTGGCGCCATCGCCCGACGCCGGGAAGCCGCTGGTGATCCTGCTGCGGCCGCTCTACCCGGAGTTCGCTGCCGCGCTGGACGGCCGCTTCCGCTTCGTGCTTGCCGCCGACGCCGACGAGGGCAACGCAGCAGAGGCGAGGGCCGTGCTCGTGCCGGCTCTGACGCCTGTGTCCGCAGATCTCGTGGCTAGGCTCCCCAAGCTGGAGATCGTGGTGGCCACGTCCACCGGCGTTGACCACATCGACCTCGACGCGTGCCGCCGCCGCGGGATCAGCGTCACCAACGCCGGCGAGGTGTTTGCCCCCGACGTGGCGGACTACGCGGTCGGGCTCGTCGTCGCCGTGCTTCGCCGCGTGGCCGCCGCCGAGGCCTACCTCCGGCGAGGCAGGTGGGCGGCGGACGGTGACTACCCTCTCGCGACCAAGGTGAGCGGCAAGCGGGTGGGGATCGTGGGGCTGGGAAGCATCGGCGGCCTGGTGGCGCGGCGGCTGGCGGCGTTCGGCTGCGTGATCGCCTACAACTCGAGGTCACCGAAGGCGTCGGCGCCGTACAAGTTTTACCCCAGCGTGCGGGAGCTCGCCGCGGAGAGCGACGTGCTGGTGCTGAGCTGCGCGCTGACGGAGGAGACGCGGCGCATGGTGGGCCGGGAGGTGATGGAGGCGCTGGGGAAGGGCGGCGTGCTGGTGAACGTGGGGCGCGGCGGGCTGGTGGACGAGGCCGAGCTGGTGAGGTGCCTGCGGGAAGGGGTGCTCGGCGGCGCCGGGCTGGACGTGTACGAGAACGAGCCGGAGGTGCCGCCGGAGCTGT-GGGGGATGGACAACGTCGTGCTGTCGGACCACCGCGCGGTGATCACGCCGGAGTCCATCCAAGGCGTCGTCGACGTCGTCAAGGCCAACCTTGACGCCTTCTTCTCCGGGAAGCCTCTCGTCAGCCAAGTGCAGCTCTGAACGTACTACAAACAAGTACACTCAGTTTCTGAACCTCAACCTGCATTCTCAACCTGAAAAATAACAAGGGACAAGTTGTTGCTTATTCATGTTTGTATGTATGCATATGCTGCGATTTCGATCTGAGCCAATCATACATAAATTGGGAGGATAATCTGAGATGATTACACATTGTTGTGTTCACTGATTTGCAAGCAGCCCTGTATCTTGTTGTTGTAACACACATCAGAGTAAACTCAATCAATACTCCATTCTTGTGGAGTATTATTCAATGTCTTAATT]

[+] EMBL AK102907             [AAAAAACAATCGACCACAGCCTTACCTGGTGCTGGTGAGGTGAGCAGAGCTATCCCAATTCCAATTCCAATTCACAATTCCCAAAGTGGAGGAGAAGATGGTGGCGCCATCGCCCGACGCCGGGAAGCCGCTGGTGATCCTGCTGCGGCCGCTCTACCCGGAGTTCGCTGCCGCGCTGGACGGCCGCTTCCGCTTCGTGCTTGCCGCCGACGCCGACGAGGGCAACGCAGCAGAGGCGAGGGCCGTGCTCGTGCCGGCTCTGACGCCTGTGTCCGCAGATCTCGTGGCTAGGCTCCCCAAGCTGGAGATCGTGGTGGCCACGTCCACCGGCGTTGACCACATCGACCTCGACGCGTGCCGCCGCCGCGGGATCAGCGTCACCAACGCCGGCGAGGTGTTTGCCCCCGACGTGGCGGACTACGCGGTCGGGCTCGTCGTCGCCGTGCTTCGCCGCGTGGCCGCCGCCGAGGCCTACCTCCGGCGAGGCAGGTGGGCGGCGGACGGTGACTACCCTCTCGCGACCAAGGTGAGCGGCAAGCGGGTGGGGATCGTGGGGCTGGGAAGCATCGGCGGCCTGGTGGCGCGGCGGCTGGCGGCGTTCGGCTGCGTGATCGCCTACAACTCGAGGTCACCGAAGGCGTCGGCGCCGTACAAGTTTTACCCCAGCGTGCGGGAGCTCGCCGCGGAGAGCGACGTGCTGGTGCTGAGCTGCGCGCTGACGGAGGAGACGCGGCGCATGGTGGGCGGGGAGGTGATGGAGGCGCTGGGGAAGGGCGGCGTGCTGGTGAACGTGGGGCGCGGCGGGCTGGTGGACGAGGCCGAGCTGGTGAGGTGCCTGCGGGAAGGGGTGCTCGGCGGCGCCGGGCTGGACGTGTACGAGAACGAGCCGGAGGTGCCGCCGGAGCTGT GGGGGATGGACAACGTCGTGCTGTCGGACCACCGCGCGGTGATCACGCCGGAGTCCATCCAAGGCGTCGTCGACGTCGTCAAGGCCAACCTTGACGCCTTCTTCTCCGGGAAGCCTCTCGTCAGCCAAGTGCAGCTCTGAACGTACTACAAACAAGTACACTCAGTTTCTGAACCTCAACCTGCATTCTCAACCTGAAAAATAACAAGGGACAAGTTGTTGCTTATTCATGTTTGTATGTATGCATATGCTGCGATTTCGATCTGAGCCAATCATACATAAATTGGGAGGATAATCTGAGATGATTACACATTGTTGTGTTCACTGATTTGCAAGCAGCCCTGTATCTTGTTGTTGTAACACACATCAGAGTAAACTCAATCAATACTCCATTCTTGTGGAGTATTATTCAATGTCTTAATT]
[+] EMBL AK067010             [                                                     CCCAATTCCAATTCCAATTCACAATTCCCAAAGTGGAGGAGAAGATGGTGGCGCCATCGCCCGACGCCGGGAAGCCGCTGGTGATCCTGCTGCGGCCGCTCTACCCGGAGTTCGCTGCCGCGCTGGACGGCCGCTTCCGCTTCGTGCTTGCCGCCGACGCCGACGAGGGCAACGCAGCAGAGGCGAGGGCCGTGCTCGTGCCGGCTCTGACGCCTGTGTCCGCAGATCTCGTGGCTAGGCTCCCCAAGCTGGAGATCGTGGTGGCCACGTCCACCGGCGTTGACCACATCGACCTCGACGCGTGCCGCCGCCGCGGGATCAGCGTCACCAACGCCGGCGAGGTGTTTGCCCCCGACGTGGCGGACTACGCGGTCGGGCTCGTCGTCGCCGTGCTTCGCCGCGTGGCCGCCGCCGAGGCCTACCTCCGGCGAGGCAGGTGGGCGGCGGACGGTGACTACCCTCTCGCGACCAAGGTGAGCGGCAAGCGGGTGGGGATCGTGGGGCTGGGAAGCATCGGCGGCCTGGTGGCGCGGCGGCTGGCGGCGTTCGGCTGCGTGATCGCCTACAACTCGAGGTCACCGAAGGCGTCGGCGCCGTACAAGTTTTACCCCAGCGTGCGGGAGCTCGCCGCGGAGAGCGACGTGCTGGTGCTGAGCTGCGCGCTGACGGAGGAGACGCGGCGCATGGTGGGCCGGGAGGTGATGGAGGCGCTGGGGAAGGGCGGCGTGCTGGTGAACGTGGGGCGCGGCGGGCTGGTGGACGAGGCCGAGCTGGTGAGGTGCCTGCGGGAAGGGGTGCTCGGCGGCGCCGGGCTGGACGTGTACGAGAACGAGCCGGAGGTGCCGCCGGAGCTGT GGGGGATGGACAACGTCGTGCTGTCGGACCACCGCGCGGTGATCACGCCGGAGTCCATCCAAGGCGTCGTCGACGTCGTCAAGGCCAACCTTGACGCCTTCTTCTCCGGGAAGCCTCTCGTCAGCCAAGTGCAGCTCTGAACGTACTACAAACAAGTACACTCAGTTTCTGAACCTCAACCTGCATTCTCAACCTGAAAAATAACAAGGGACAAGTTGTTGCTTATTCATGTTTGTATGTATGCATATGCTGCGATTTCGATCTGAGCCAATCATACATAAATTGGGAGGATAATCTGAGATGATTACACATTGTTGTGTTCACTGATTTGCAAGCAGCCCTGTATCTTGTTGTTGTAACACACATCAGAGTAAACTCAATCAATACTCCATTCTTGTGG                      ]
[+] EMBL CF322531             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCGCCTACAACTCGAGGTCACCGAAGGCGTCGGCGCCGTACAAGTTTTACCCCAGCGTGCGGGAGCTCGCCGCGGAGAGCGACGTGCTGGTGCTGAGCTGCGCGCTGACGGAGGAGACGCGGCGCATGGTGGGCCGGGAGGTGATGGAGGCGCTGGGGAAGGGCGGCGTGCTGGTGAACGTGGGGCGCGGCGGGCTGGTGGACGAGGCCGAGCTGGTGAGGTGCCTG GGGAAGGGGTGCTCGGCGGCGCCGGGCTGGACGTGTACGAGAACGAGCCGGAGGTGCCGCCGGAGCTGTGGGGGGATGGACAACGTCGTGCTGTCGGACCACCGCGCGGTGATCACGCCGGAGTCCATCCAAGGCGTGNTCGACGTCGTCAAGGCCAACCTTGACGCCTTCTTCTCCGGGAAGCCTCTCGTCAGCCAAGTGCAGCTCTGAACGTACTACAAACAAGTACACTCAGTTTCTGAACCTCAACCTGCATTCTCAACCTGAAAAATAACAAGGGACAAGTTGTTGCTTATTCATGTTTGTATGTATGCATATGCTGCGATT                                                                                                                                                                     ]


>consensus_4305#0 AAAAAACAATCGACCACAGCCTTACCTGGTGCTGGTGAGGTGAGCAGAGCTATCCCAATT CCAATTCCAATTCACAATTCCCAAAGTGGAGGAGAAGATGGTGGCGCCATCGCCCGACGC CGGGAAGCCGCTGGTGATCCTGCTGCGGCCGCTCTACCCGGAGTTCGCTGCCGCGCTGGA CGGCCGCTTCCGCTTCGTGCTTGCCGCCGACGCCGACGAGGGCAACGCAGCAGAGGCGAG GGCCGTGCTCGTGCCGGCTCTGACGCCTGTGTCCGCAGATCTCGTGGCTAGGCTCCCCAA GCTGGAGATCGTGGTGGCCACGTCCACCGGCGTTGACCACATCGACCTCGACGCGTGCCG CCGCCGCGGGATCAGCGTCACCAACGCCGGCGAGGTGTTTGCCCCCGACGTGGCGGACTA CGCGGTCGGGCTCGTCGTCGCCGTGCTTCGCCGCGTGGCCGCCGCCGAGGCCTACCTCCG GCGAGGCAGGTGGGCGGCGGACGGTGACTACCCTCTCGCGACCAAGGTGAGCGGCAAGCG GGTGGGGATCGTGGGGCTGGGAAGCATCGGCGGCCTGGTGGCGCGGCGGCTGGCGGCGTT CGGCTGCGTGATCGCCTACAACTCGAGGTCACCGAAGGCGTCGGCGCCGTACAAGTTTTA CCCCAGCGTGCGGGAGCTCGCCGCGGAGAGCGACGTGCTGGTGCTGAGCTGCGCGCTGAC GGAGGAGACGCGGCGCATGGTGGGCCGGGAGGTGATGGAGGCGCTGGGGAAGGGCGGCGT GCTGGTGAACGTGGGGCGCGGCGGGCTGGTGGACGAGGCCGAGCTGGTGAGGTGCCTGCG GGAAGGGGTGCTCGGCGGCGCCGGGCTGGACGTGTACGAGAACGAGCCGGAGGTGCCGCC GGAGCTGTGGGGGATGGACAACGTCGTGCTGTCGGACCACCGCGCGGTGATCACGCCGGA GTCCATCCAAGGCGTCGTCGACGTCGTCAAGGCCAACCTTGACGCCTTCTTCTCCGGGAA GCCTCTCGTCAGCCAAGTGCAGCTCTGAACGTACTACAAACAAGTACACTCAGTTTCTGA ACCTCAACCTGCATTCTCAACCTGAAAAATAACAAGGGACAAGTTGTTGCTTATTCATGT TTGTATGTATGCATATGCTGCGATTTCGATCTGAGCCAATCATACATAAATTGGGAGGAT AATCTGAGATGATTACACATTGTTGTGTTCACTGATTTGCAAGCAGCCCTGTATCTTGTT GTTGTAACACACATCAGAGTAAACTCAATCAATACTCCATTCTTGTGGAGTATTATTCAA TGTCTTAATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)