cluster # 4317

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Oryza sativa
cluster # 4317 cluster # 4317 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4317#0 length = 1748 sequences # 3
consensusID : consensus_4317#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1748
fasta sequence
                              [CTCGACGGCAAATCGCCGGCCCCCCACGAAGACTTGTTCTTCCTCCCGCCGCGCATTTCTTTAATCACTCGATCTGAGCTGCATCCCAAATCCCCCCCGATTTAATTATTTGCAGGGGGGTGATGGATCCCCACATTGTCGTCGCGTCCCCTCCCATCGCGGGGATGTGATGTCTATGAGGAGGATAATAAGATCATGGAGGGGCACAAACCAGTGCACCAATTCGTTGATAGCCCCAAGCCGCAGCGCAGCGCGAGGAGAATTTGTGGAATGGCATCGAGGATCGATGCGAATGACCACGGCAATCAGCAAGGAGGCAATCCCCAAGGTCCAGTTGGTACAGCAGAGAGATTAGAGCATCTTTTAAACCAACCAGCAAACAAAATTTGTGCTGACTGTGGTGCTCCAGATCCCAAATGGGTGTCATTGACTTTTGGTGTGTTTATTTGCATCAAGTGCTCTGGAGCTCATAGAAGTCTTGGGGTGCACATATCCAAGGTGGTCTCAGTAAAGCTAGACGAGTGGGCAGATGAACAAGTTGATATTTTAGCTGATTCAGGTGGAAATGCTGCAGTTAACATGATATACGAGGCGTTTATACCTGAAAACTACATGAAGCCAAGGCAAGATTGCTCATCAGAGGGGCGCAATGACTTTGTTAGGAGAAAATATGAGCTTCAACAATTTTTGTCCAACACACAGCTTACTTGCTACTCACAAAAGAGCGGAAAAAATCATAATCGCGTACAACATAGCAGTTCAAATAGGCATGGTTTAGGCCATGCTTTCAGGAACAGTTGGAGGAGAAAAGAACATGAGAGTAAATCAGTGAAGAAAACAGTGGAGATAGGTATGGTTGAATTTGTTGGATTAATTAAGGTCAATGTCATAAGAGGCACAAATCTAGCTGTTCGTGATATGATGTCCAGCGACCCTTATGTTATCCTTAACCTTGGACACCAGTCGATGAAAACAAAGGTGATTAAGAGCAGCCTGAATCCTGTATGGAATGAAAGGATTTTGCTATCAATACCTGATCCCATACCTATGCTTAAATTGCAAGTCTATGACAAGGACACATTCACTACAGACGACCGAATGGGGGAGGCTGAGATTAACATTCAGCCACTGGTTGCTGCAGCCAAGGCATATGAGACCTCGGTCGTCGCTGATACGGCACAGCTCAACAGATGGCTAGCAAAAGAAGGCATCTGGATCCAAAAGGACAGTGCTATCTCCATCATCGATGGCAAGGTGAAGCAGGAGGTGACCGTCAGGCTTCAGAACGTCGAGCGTGGCCATCTTGAGATGGAGCTCGAGTGTGTCCCGCTCACGCAATAGCTGCGCCTGCAGAAATGGGTTGCTCTGACATTCTGAATTCAGAACATGGTTACACGAACAAATTCTTTGCAAACACTTAGGGCTTTGTGTGTAATTACTGTGGCAAATTAGAACTCAACCATGCGTTCAAGGTTTCCATGCATCAGATGTATCTGTAGAAGTTAGGAAGGAGTACATGATGTGAGGCGATTTGTCTATTAAAGTTGAGATCATTCTGGCACAAATCTGCTTGATTTGTAAGCTTGTCTTTTAAAATCCTAATTTCACACCGTCTCTTCCTTGTAACCATCTGAAATGGCATAATGGTTCAGAACAAAACGGATGTACCGTGCCCATCTCTACAGAACTACATATCCAATGTTCGATTTTAATTTCAAATAAACAGATTTTTGTTTCAAAAAAAAAAA]

[+] EMBL AU223205             [CTCGACGGCAAATCGCCGGCCCCCCACGAAGACTTGTTCTTCCTCCCGCCGCGCATTTCTTTAATCACTCGATCTGAGCTGCATCCCAAATCCCCCCCGATTTAATTATTTGCAGGGGGGTGATGGATCCCCACATTGTCGTCGCGTCCCCTCCCATCGCGGGGATGTGATGTCTATGAGGAGGATAATAAGATCATGGAGGGGCACAAACCAGTGCACCAATTCGTTGATAGCCCCAAGCCGCAGCGCAGCGCGAGGAGAATTTGTGGAATGGCATCGAGGATCGATGCGAATGACCACGGCAATCAGCAAGGAGGCAATCCCCAAGGTCCAGTTGGTACAGCAGAGAGATTAGAGCATCTTTTAAACCAACCAGCAAACAAAATTTGTGCTGACTGTGGTGCTCCAGATCCCAAATGGGTGTCATTGACTTTTGGTGTGTTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK073021             [                                 TTGTTCTTCCTCCCGCCGCGCATTTCTTTAATCACTCGATCTGAGCTGCATCCCAAATCCCCCCCGATTTAATTATTTGC GGGGGGTGATGGATCCCCACATTGTCGTCGCGTCCCCTCCCATCGCGGGGATGTGATGTCTATGAGGAGGATAATAAGATCATGGAGGGGCACAAACCAGTGCACCAATTCGTTGATAGCCCCAAGCCGCAGCGCAGCGCGAGGAGAATTTGTGGAATGGCATCGAGGATCGATGCGAATGACCACGGCAATCAGCAAGGAGGCAATCCCCAAGGTCCAGTTGGTACAGCAGAGAGATTAGAGCATCTTTTAAACCAACCAGCAAACAAAATTTGTGCTGACTGTGGTGCTCCAGATCCCAAATGGGTGTCATTGACTTTTGGTGTGTTTATTTGCATCAAGTGCTCTGGAGCTCATAGAAGTCTTGGGGTGCACATATCCAAGGTGGTCTCAGTAAAGCTAGACGAGTGGGCAGATGAACAAGTTGATATTTTAGCTGATTCAGGTGGAAATGCTGCAGTTAACATGATATACGAGGCGTTTATACCTGAAAACTACATGAAGCCAAGGCAAGATTGCTCATCAGAGGGGCGCAATGACTTTGTTAGGAGAAAATATGAGCTTCAACAATTTTTGTCCAACACACAGCTTACTTGCTACTCACAAAAGAGCGGAAAAAATCATAATCGCGTACAACATAGCAGTTCAAATAGGCATGGTTTAGGCCATGCTTTCAGGAACAGTTGGAGGAGAAAAGAACATGAGAGTAAATCAGTGAAGAAAACAGTGGAGATAGGTATGGTTGAATTTGTTGGATTAATTAAGGTCAATGTCATAAGAGGCACAAATCTAGCTGTTCGTGATATGATGTCCAGCGACCCTTATGTTATCCTTAACCTTGGACACCAGTCGATGAAAACAAAGGTGATTAAGAGCAGCCTGAATCCTGTATGGAATGAAAGGATTTTGCTATCAATACCTGATCCCATACCTATGCTTAAATTGCAAGTCTATGACAAGGACACATTCACTACAGACGACCGAATGGGGGAGGCTGAGATTAACATTCAGCCACTGGTTGCTGCAGCCAAGGCATATGAGACCTCGGTCGTCGCTGATACGGCACAGCTCAACAGATGGCTAGCAAAAGAAGGCATCTGGATCCAAAAGGACAGTGCTATCTCCATCATCGATGGCAAGGTGAAGCAGGAGGTGACCGTCAGGCTTCAGAACGTCGAGCGTGGCCATCTTGAGATGGAGCTCGAGTGTGTCCCGCTCACGCAATAGCTGCGCCTGCAGAAATGGGTTGCTCTGACATTCTGAATTCAGAACATGGTTACACGAACAAATTCTTTGCAAACACTTAGGGCTTTGTGTGTAATTACTGTGGCAAATTAGAACTCAACCATGCGTTCAAGGTTTCCATGCATCAGATGTATCTGTAGAAGTTAGGAAGGAGTACATGATGTGAGGCGATTTGTCTATTAAAGTTGAGATCATTCTGGCACAAATCTGCTTGATTTGTAAG                                                                                                                                                                      ]
[-] EMBL CA763129             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GACGAGACAAGGGGGGAGGCTGAGATTAACATTCAGCCACTGGTTGCTGCAGCCAAGGCATATGAGACCTCGGTCGTCGCTGATACGGCACAGCTCAACAGATGGCTAGCAAAAGAAGGCATCTGGATCCAAAAGGACAGTGCTATCTCCATCATCGATGGCAAGGTGAAGCAGGAGGTGACCGTCAGGCTTCAGAACGTCGAGCGTGGCCATCTTGAGATGGAGCTCGAGTGTGTCCCGCTCACGCAATAGCTGCGCCTGCAGAAATGGGTTGCTCTGACATTCTGAATTCAGAACATGGTTACACGAACAAATTCTTTGCAAACACTTAGGGCTTTGTGTGTAATTACTGTGGCAAATTAGAACTCAACCATGCGTTCAAGGTTTCCATGCATTAGATGTATCTGTAGAAGTTAGGAAGGAGTACCTGATGTGAGGCGATTTGTCTATTAAAGTTGAGATCATTCTGGCACAAATCTGCTTGATTTGTAAGCTTGTCTTTTAAAATCCTAATTTCACACCGTCTCTTCCTTGTAACCATCTGAAATGGCATAATGGTTCAGAACAAAACGGATGTACCGTGCCCATCTCTACAGAACTACATATCCAATGTTCGATTTTAATTTCAAATAAACAGATTTTTGTTTCAAAAAAAAAAA]




>consensus_4317#0
CTCGACGGCAAATCGCCGGCCCCCCACGAAGACTTGTTCTTCCTCCCGCCGCGCATTTCT
TTAATCACTCGATCTGAGCTGCATCCCAAATCCCCCCCGATTTAATTATTTGCAGGGGGG
TGATGGATCCCCACATTGTCGTCGCGTCCCCTCCCATCGCGGGGATGTGATGTCTATGAG
GAGGATAATAAGATCATGGAGGGGCACAAACCAGTGCACCAATTCGTTGATAGCCCCAAG
CCGCAGCGCAGCGCGAGGAGAATTTGTGGAATGGCATCGAGGATCGATGCGAATGACCAC
GGCAATCAGCAAGGAGGCAATCCCCAAGGTCCAGTTGGTACAGCAGAGAGATTAGAGCAT
CTTTTAAACCAACCAGCAAACAAAATTTGTGCTGACTGTGGTGCTCCAGATCCCAAATGG
GTGTCATTGACTTTTGGTGTGTTTATTTGCATCAAGTGCTCTGGAGCTCATAGAAGTCTT
GGGGTGCACATATCCAAGGTGGTCTCAGTAAAGCTAGACGAGTGGGCAGATGAACAAGTT
GATATTTTAGCTGATTCAGGTGGAAATGCTGCAGTTAACATGATATACGAGGCGTTTATA
CCTGAAAACTACATGAAGCCAAGGCAAGATTGCTCATCAGAGGGGCGCAATGACTTTGTT
AGGAGAAAATATGAGCTTCAACAATTTTTGTCCAACACACAGCTTACTTGCTACTCACAA
AAGAGCGGAAAAAATCATAATCGCGTACAACATAGCAGTTCAAATAGGCATGGTTTAGGC
CATGCTTTCAGGAACAGTTGGAGGAGAAAAGAACATGAGAGTAAATCAGTGAAGAAAACA
GTGGAGATAGGTATGGTTGAATTTGTTGGATTAATTAAGGTCAATGTCATAAGAGGCACA
AATCTAGCTGTTCGTGATATGATGTCCAGCGACCCTTATGTTATCCTTAACCTTGGACAC
CAGTCGATGAAAACAAAGGTGATTAAGAGCAGCCTGAATCCTGTATGGAATGAAAGGATT
TTGCTATCAATACCTGATCCCATACCTATGCTTAAATTGCAAGTCTATGACAAGGACACA
TTCACTACAGACGACCGAATGGGGGAGGCTGAGATTAACATTCAGCCACTGGTTGCTGCA
GCCAAGGCATATGAGACCTCGGTCGTCGCTGATACGGCACAGCTCAACAGATGGCTAGCA
AAAGAAGGCATCTGGATCCAAAAGGACAGTGCTATCTCCATCATCGATGGCAAGGTGAAG
CAGGAGGTGACCGTCAGGCTTCAGAACGTCGAGCGTGGCCATCTTGAGATGGAGCTCGAG
TGTGTCCCGCTCACGCAATAGCTGCGCCTGCAGAAATGGGTTGCTCTGACATTCTGAATT
CAGAACATGGTTACACGAACAAATTCTTTGCAAACACTTAGGGCTTTGTGTGTAATTACT
GTGGCAAATTAGAACTCAACCATGCGTTCAAGGTTTCCATGCATCAGATGTATCTGTAGA
AGTTAGGAAGGAGTACATGATGTGAGGCGATTTGTCTATTAAAGTTGAGATCATTCTGGC
ACAAATCTGCTTGATTTGTAAGCTTGTCTTTTAAAATCCTAATTTCACACCGTCTCTTCC
TTGTAACCATCTGAAATGGCATAATGGTTCAGAACAAAACGGATGTACCGTGCCCATCTC
TACAGAACTACATATCCAATGTTCGATTTTAATTTCAAATAAACAGATTTTTGTTTCAAA
AAAAAAAA
clustalw multiple alignements is not computed in this case