cluster # 4330

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Oryza sativa
cluster # 4330 cluster # 4330 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4330#0 length = 542 sequences # 3

consensusID : consensus_4330#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 542
fasta sequence

                              [CGGCCCGGGCATGGCCTACGGCGGTGTCCGCACGCTCCGTCGAGCCTGCGGTCACCCGCAGGAAGGTGCTCGTGGCGCCTGACGATGGGGAGGACGGCAAGGTGGACGAACGCGCCGACACGTTCATCAGGAAGTTCAAGGAGAGGACGCAGTCGGACATAGCGCGTATGG--AAGCCGAGGCGGCCGCAGCAGTCGCCGCTGCTCGGCCGCCGCCGGCACTCGGTGCCGCCAACTTGGCTGGAACTGCGTACGGATACTATGGGACGGGATACTATTGTTAAGTAAGACTCTGCGCTGCTTGGATACGTCGTTAGTTTGCTACTACAAGTAAGATTGAAAGTACCGCCAACTATGTATATATACTGAACGCATGCTTGCTTTGACCTGTAAATTAATTTGAATTTCAATAATTCTGGCAGCTGTCGATGGGTAGCTAGTTTCAGGGTTTAACATTGTAAATACTACTTATGCATGATGATTGTAAGATAACTAATGTGCTAATGCATTTTAGTTTTGGATAAACACANAAAAAAAAAAAAAAA]

[+] EMBL AK062447             [CGGCCCGGGCATGGCCTACGGCGGTGTCCGCACGCTCCGTCGAGCCTGCGGTCACCCGCAGGAAGGTGCTCGTGGCGCCTGACGATGGGGAGGACGGCAAGGTGGACGAACGCGCCGACACGTTCATCAGGAAGTTCAAGGAGAGGACGCAGTCGGACATAGCGCGTATGG  AAGCCGAGGCGGCCGCAGCAGTCGCCGCTGCTCGGCCGCCGCCGGCACTCGGTGCCGCCAACTTGGCTGGAACTGCGTACGGATACTATGGGACGGGATACTATTGTTAAGTAAGACTCTGCGCTGCTTGGATACGTCGTTAGTTTGCTACTACAAGTAAGATTGAAAGTACCGCCAACTATGTATATATACTGAACGCATGCTTGCTTTGACCTGTAAATTAATTTGAATTTCAATAATTCTGGCAGCTGTCGATGGGTAGCTAGTTTCAGGGTTTAACATTGTAAATACTACTTATGCATGATGATTGTAAGATAA                                                     ]
[+] EMBL CA754740             [CGGCCCGGGCATGGCCTACGGCGGTGTCCGCACGCTCCGTCGAGCCTGCGGTCACCCGCAGGAAGGTGCTCGTGGCGCCTGACGATGGGGAGGACGGCAAGGTGGACGAACGCGCCGACACGTTCATCAGGAAGTTCAAGGAGAGGACGCAGTCGGACATAGCGCGTATGGAAAACCCGAGGCGGCCGCAGCAGTCGCCGCTGCTCGGCCGCCGCCGGCACTCGGTGCCGCCAACTTGGCTGGAACTGCGTACGGATACTATGGGACGGGATACTATTGTTAAGTAAGACTCTGCGCTGCTTGGATACGTCGTTAGTTTGCTACTACNAGTAAGATTGAAAGTACCGCCCACTATGTATATATACTGAACGCATGCTTGCTTTGACCTGTAAATTAATTTGAATTTTCATAtt                                                                                                                                   ]
[+] EMBL CA756770             [                                                                                                                                                                AGCGCGTATGG  AAGCCGAGGCGGCTGCAGCAGTCGCCGCTGCTCGGCCGCCGCCGGCACTCGGTGCCGCCAACTTGGCTGGAACTGCGTACGGATACTATGGGACGGGATACTATTGTTAACTAAGACTCTGCGCTGCATGGATACGTCGTTAGTTTGCTACTACAAGTAAGATTGAAAGTACCGCCAACTATGTATATGTACTGAACGCATGCTTGCTTTGACCTGTAAATTAATTTGAATTTCAATAATTCTGGCAGCTGTCGATGGGTAGATAGTTTCAGGGTTTAACATTGTAAATACTACTTATGCATGATGATTGTAAGATAACTAATGTGCTAATGCATTTTAGTTTTGGATAAACACANAAAAAAAAAAAAAAA]




>consensus_4330#0
CGGCCCGGGCATGGCCTACGGCGGTGTCCGCACGCTCCGTCGAGCCTGCGGTCACCCGCA
GGAAGGTGCTCGTGGCGCCTGACGATGGGGAGGACGGCAAGGTGGACGAACGCGCCGACA
CGTTCATCAGGAAGTTCAAGGAGAGGACGCAGTCGGACATAGCGCGTATGGAAGCCGAGG
CGGCCGCAGCAGTCGCCGCTGCTCGGCCGCCGCCGGCACTCGGTGCCGCCAACTTGGCTG
GAACTGCGTACGGATACTATGGGACGGGATACTATTGTTAAGTAAGACTCTGCGCTGCTT
GGATACGTCGTTAGTTTGCTACTACAAGTAAGATTGAAAGTACCGCCAACTATGTATATA
TACTGAACGCATGCTTGCTTTGACCTGTAAATTAATTTGAATTTCAATAATTCTGGCAGC
TGTCGATGGGTAGCTAGTTTCAGGGTTTAACATTGTAAATACTACTTATGCATGATGATT
GTAAGATAACTAATGTGCTAATGCATTTTAGTTTTGGATAAACACANAAAAAAAAAAAAA
AA

clustalw multiple alignements is not computed in this case