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Oryza sativa
cluster # 4335 cluster # 4335       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4335#0 length = 865 sequences # 3  

consensusID : consensus_4335#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 865
fasta sequence
                              [GAAAGCCAAGAACACACTTGGAAGCAAACAACCAAATATGGCTGATCCAGTTAAGCTCATCGGCGCATTTGGCAGCCCGTTCGTGCACCGAGCCGAGGTTGCCCTGCGGCTCAAGGGAGTGGCTTACGAGTTCA-TCCACGAGG-ACCTTGAC-AACAAGA-GCGA-CCTGCTT-CTCGCCAAAAACCCCATCCAC-AAGAAGGTCCCCGTGCTCCTCCATGGCGACCGTGCCATCTGCGAGTCGCTCGTCATCGTCGAGTACGCGGACGAGGTGTTCGACGGCCGTCCCATCCTACCCACCGACCCCTACGACCGCGCCATGGCCCGTTTCTGGGCTCACTTCATCGAACACAAGTGCTCGAGGTCATCGTGGCTGGCATTGTGGTTGGACGGCGAGGAGCAGGAGGGGCTTCTGAAGGAGACGAAGGAGAACCTGGCGCTTCTGGAGGCGCAGCTCCATGGGAAGAGGTTCTTTGCCGGTGACTCGGTCGGCTACCTCGACATTGTTGCCAGTGGACTGGCTCACTGGATCAGCGTGGTTGAGGAGGTGACCGGAGTGAGCTTGATGGGCGGCGCCGACGAGGATGACGAGTATCCTGCTCTACGCCGTTGGGCCAAGGAGTACACCACGGATGAGACCGTGATGCAGTGCCTGCCGAGCAGAGAGCACCTCGCTGCCTTCTTCGCTGCGAAGAAGGACAAGCTGAAGATGGTGGCTAAGGCGATGCTGCATCAGTGATTGTGAGTGTTGTGGGGGCCGACAGTGGGAGTGTATGTCTCAGGTGATGGTGCTTCTTAAATAAAATCGAATCAGAACATAATTAAACGATTATAAAGCCGAAAGTTCTCCCCGTAAAAAAAAAAAAAAAAA]

[+] EMBL AK064612             [GAAAGCCAAGAACACACTTGGAAGCAAACAACCAAATATGGCTGATCCAGTTAAGCTCATCGGCGCATTTGGCAGCCCGTTCGTGCACCGAGCCGAGGTTGCCCTGCGGCTCAAGGGAGTGGCTTACGAGTTCA TCCACGAGG ACCTTGAC AACAAGA GCGA CCTGCTT CTCGCCAAAAACCCCATCCAC AAGAAGGTCCCCGTGCTCCTCCATGGCGACCGTGCCATCTGCGAGTCGCTCGTCATCGTCGAGTACGCGGACGAGGTGTTCGACGGCCGTCCCATCCTACCCACCGACCCCTACGACCGCGCCATGGCCCGTTTCTGGGCTCACTTCATCGAACACAAGTGCTCGAGGTCATCGTGGCTGGCATTGTGGTTGGACGGCGAGGAGCAGGAGGGGCTTCTGAAGGAGACGAAGGAGAACCTGGCGCTTCTGGAGGCGCAGCTCCATGGGAAGAGGTTCTTTGCCGGTGACTCGGTCGGCTACCTCGACATTGTTGCCAGTGGACTGGCTCACTGGATCAGCGTGGTTGAGGAGGTGACCGGAGTGAGCTTGATGGGCGGCGCCGACGAGGATGACGAGTATCCTGCTCTACGCCGTTGGGCCAAGGAGTACACCACGGATGAGACCGTGATGCAGTGCCTGCCGAGCAGAGAGCACCTCGCTGCCTTCTTCGCTGCGAAGAAGGACAAGCTGAAGATGGTGGCTAAGGCGATGCTGCATCAGTGATTGTGAGTGTTGTGGGGGCCGACAGTGGGAGTGTATGTCTCAGGTGATGGTGCTTCTTAAATAAAATCGAATCAGAACATAATTAAACGATTATAAAGCCGAAAG                           ]
[+] EMBL CA754695             [               ACTTGGAAGCAAACAACCAAATATGGCTGATCCAGTTAAGCTCATCGGCGCATTTGGCAGCCCGTTCGTGCACCGAGCCGAGGTTGCCCTGCGGCTCANGGGAGTGGCTTACGAGTTCA TCCACGAGG ACCTTGAC NACAAGA GCGA CCTGCTT CTCGCCAAAAACCCCATCCAC AAGAAGGTCCCCGTGCTCCTCCATGGCGACCGTGCCATCTGCGAGTCGCTCGTCATCGTCGAGTACGCGGACGAGGTGTTCGACGGCCGTCCCATCCTACCCACCGACCCCTACGACCGCGCCATGGCCCGTTTCTGGGCTCACTTCATCGAACACAAGTGCTCGAGGTCATCGTGGCTGGCATTGTGGTTGGACGGCGAGGAGCAGGAGGGGCTTCTGAAGGAGACGAAGGAGAACCTGGCGCTTCTGGAGGCGCAGCTCCATGGGAAGAGGTTCTTTGCCGGTGACTCGGTCGGCTACCTCGACATTGTTGCCAGTGGACTGGCTCACTGGATCAGCGTGGTTGAGGAGGTGACCGGAGTGAGCTTGATGGGCGGCGCCGACGAGGATGACGAGTATCCTGCTCTACGCCGTTGGGCCAAGGAGTACACCACGGATGAGACCGTGATGCAGTGCCTGCCGAGCAGAGAGCACCTCGCTGCCTTTTTCGCTGCGAAGAAGGACAAGCTGAAGATGGTGGCTAAGGCGATGCTGCATCAGTGATTGTGAGTGTTGTGGGGGCCGACAGTGGGAGTGTATGTCTCAGGTGATGGTGCTTCTTAAATAAAATCGAATCAGAACATAATTAAACGATTATAAAGCCGAAAGTTCTCCCCGTAAAAAAAAAAAAAAAAA]
[+] EMBL D42981               [                                                                                                                                gtTTCATTCCACGAGGAACCTTGACAAACAAGAGGCGACCCTGCTTCCTCGCCAAAAACCCCATCCACAAAGAAGGTCCCCGTGCTCCTNCATGGCGACCGTGCCATCTGCGAGTCGGTCGTCATCGTCGAGTACGCGGACGAGGTGTTCGACGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]


>consensus_4335#0 GAAAGCCAAGAACACACTTGGAAGCAAACAACCAAATATGGCTGATCCAGTTAAGCTCAT CGGCGCATTTGGCAGCCCGTTCGTGCACCGAGCCGAGGTTGCCCTGCGGCTCAAGGGAGT GGCTTACGAGTTCATCCACGAGGACCTTGACAACAAGAGCGACCTGCTTCTCGCCAAAAA CCCCATCCACAAGAAGGTCCCCGTGCTCCTCCATGGCGACCGTGCCATCTGCGAGTCGCT CGTCATCGTCGAGTACGCGGACGAGGTGTTCGACGGCCGTCCCATCCTACCCACCGACCC CTACGACCGCGCCATGGCCCGTTTCTGGGCTCACTTCATCGAACACAAGTGCTCGAGGTC ATCGTGGCTGGCATTGTGGTTGGACGGCGAGGAGCAGGAGGGGCTTCTGAAGGAGACGAA GGAGAACCTGGCGCTTCTGGAGGCGCAGCTCCATGGGAAGAGGTTCTTTGCCGGTGACTC GGTCGGCTACCTCGACATTGTTGCCAGTGGACTGGCTCACTGGATCAGCGTGGTTGAGGA GGTGACCGGAGTGAGCTTGATGGGCGGCGCCGACGAGGATGACGAGTATCCTGCTCTACG CCGTTGGGCCAAGGAGTACACCACGGATGAGACCGTGATGCAGTGCCTGCCGAGCAGAGA GCACCTCGCTGCCTTCTTCGCTGCGAAGAAGGACAAGCTGAAGATGGTGGCTAAGGCGAT GCTGCATCAGTGATTGTGAGTGTTGTGGGGGCCGACAGTGGGAGTGTATGTCTCAGGTGA TGGTGCTTCTTAAATAAAATCGAATCAGAACATAATTAAACGATTATAAAGCCGAAAGTT CTCCCCGTAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)