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Oryza sativa
cluster # 4378 cluster # 4378       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4378#0 length = 3123 sequences # 2  
 consensus_4378#1 length = 1534 sequences # 1  
consensusID : consensus_4378#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3123
fasta sequence 
                              [GTCCTCCTCCTCCTCCTCTTGCTCCCCTTCCACTTCCTGGGAAAAAGCCTCTTGATCTCCCACTCTCTCTCACCCTCTCCGCTTCCAGCCGACTTCCGCCCTGCAGGTAAAGGTTTCAGCAATGAGGCAAGATGTTGCCTCCAAATGCGACAGCCGTTCTCGGTCAGGAGCAGCTCCTGAAATCATGCGATCCCCTCGCCGCACCATCGGAGAAAATGGCTATCGGGACACAAGACACCACCAGTTGAAATGCTCAGATGGCAACCTGGGAGAGCTACGCGTAGAGAGCATCCCAAATTTCCACTGCAAGAGCTTGCCCACAAGAAGCCGCAAGACCAATGCGGAGGATAGTATTGTGGGAAAGCGTGGTTCTATGTACCAGAGCTCTAGTGAAATTAGCATGATAAGAAAACTCCACGAAGGCAGGAGGAAGAAAATAGATTCTGCACTTGACGGGGATGCATTTCTGTCATTTGAGATTGTTGATTCATCCTCCCAGCCTAGCACAAGTGGAGCTTACCTTTTCTCGCATCAGAATCGCCGCTCAGAAGCTAAGTCTTCTGTGGAATCTCGTAGAATTCATCGAGCATCGAGGGACTTCCTGGATCTTTCATTCCGTGAGCTTCCTGATGAGAATTGTAGGCTGGACCGTCCACGCATGGATTGCACCCTGTTGAAAAATGATGCAGGCGATGGTTTCTTGGAGATCTCACTTGAGGAAGAGATGACCAAAGGTCCCTGCAGAAATGCAGCTCCTCAGTTGATAGGTGGAGAGTCAAGTAAAGGTACAGAAGCAAACTGCCTGCAAAACAAGATCAGTGTATGTCCCAGTGAGAATAATTGTAGTCAGAGAGAGAGGAATTCAACAAACAGTTTGCCTGAGTCCATGTCGGCCAAGGTGAGCATCTCTGATGGCACCCGTCCATCAGAAAGTGTTCGTCATGGCATAGAGAACAGCACTAAAGTTCGATCAAGCCCCTTCAAGAAGATTCTGGACCCTATTATGAAGTCCAAATCTATTAGAAGTCCATCTCTCATGGAAGACTCCAACCATGTTACTATGCCGGTTAACAGGAAAAATTGTGTATCCCGCAAATCATTGCTGAGTGATTTATCAAGGAGTGAACAAAGCCAATCAATTAATTGCCAGCTGAATGGAGAAAGGCAGCATACAACTAATGCTCTATCACCTGCTCATCTTCAGGCGGTTCTTAAATTGGATACCAAGAATGGTATTCCAGTTTTTGAGTTCTGTGTCAAGGGCCCTGAAGAATCCATTTCTGCTAGGAGTTGGAAAACAGGGAATGACTTGAACTGGATTTACACTTTCCACAGTGGTGGAAAACGAGCAAGTGCTACTGGAAGGGCCTCCAAAGATGGGCGTTGGTGTTCACCGCCGATTGTAGGCCAGATGCAAGCTTCTTCGTACTTGTGCTCTGAAGTTGGAAAAGATGGTGTTCTGACTAACTCTGTCATCACTGAGTTTGTTTTGTATGATATCGCTCATGCAAGACAGAGCTTTTCTGCTGAGGAGAAAACTCAATGTACAGAGACTACTCAATCGACATTGTCAAGTGCCGTCGAGAAATCAGCCTCTGGTGACTGTCCCCAGAGGATTAATCTGATGGACCAGCAAAACAGTGCAAGAAATAACTCTGATGTATCAACATCTTGTCCGTGGTCTGAAGAAGATCTTTATCCTCATTTGGAGATTGCAGCAACGGTCATCCAAGTTCCATTTAATAGAAGCAAGTCCAAAGAACTTAAGAGTGGTTTGTCACCTGGTACTGTAAAAGTGATTACACCGAGTGGGCTGCATGGGTTACCAAACGATGATGAAACCAGTCCATCACCTTTGCTGGATAGATGGAGGTACGGTGGAGGCTGCGACTGCGGTGGATGGGACATGGCTTGTCCCATTGCTGTCCTTGGCAATGCATATGATAATAACTGGGCCAATTCTGTCACAAAGGAAGGCGAGAATCCTATGGAACTCTTTGTTCTGGTACACTTCACTTCTCCTATCTTTATTTTTTGTGTGAAATCACTTTGGGCTATGCATGCTCTGGTTTCTAAGATACTTGGTTGCCTTCCTGCTAACTCTCCAAAGATAACCCAAGGCTGATCGAGAACTTCTTTTAAGAAAGATTGATCAAATTTTCCAAGTGTTAGATTTGCTCCTCCTAGAGAACTGCCCTTAGACCCACTTTTTCTTTAGTGTAGTAATCTTTTGTTTTCGTTGTGAGCTATAAAATCATATATGTTAACCATATGGCTCGCTTTAGTAATGCCTATGAGTTTATAGGAAGAAAATCGATAGCCTTGAGGCTTATTTTGAAGATCAAGGAAACAAGACAGACATTTGACCCTTAAAACCATTGTCAGTGACGTATCTAGGCTTATTCAGTATATCGACGATTCATCTCTGTTTTCATCCATGTATTGATCTTAGTCCAAAAATGAACAAGTTGTCATATTCTTCGAACAGGGTGGCAAAGAAGAGCTCCCTGCCCTTTCCATTAAGGGCAACGAGAAAGGACAGTTATTGGTGCATTTTCACGCGCGGTTATCAGCAATGCAAGCCTTCTCAACCTGCATTTCTCTGCTGCACTGTTCGGAAGCTTCGACAGCCGTAAGTATTGAGAAGGGCAAGCACAAGCTCTACTCCAGTTCACTTAAGATGCTGCTCGAGGAGGAAGTGAGCCAGCTGATCGAGGCAGTCACGGAAGAAGAGAAGAGGAAAACAAAGAAGAGAAGTGAGAAGCCACCCAGACCAGTTGTGCTCGACCCACCCTTCTCTCCCATGGGAAGAGTGTAGGTATTGTGAACAACTGTGTTCTCATGGTCATGGTGTGCAACATTATGAGTCATATTTGGGTTTCATGTCCATATTTTTTGTTGTGATAAAAGAAGCACTTTTATGCTGTTCATAAAGATGGAAGGTGCGTGTAGGGTTTTTTCTTATCTCTTTGTAGCTTTTAGCAGATCAGTAGCAAGGCAATATATCATTGTTGAATTGCCAGATAGAAGGAAGGAATTCTGTAGTTAGTAGTAGAGGGCAATGGCAGGTTCCATGAGAGAGGACATAAATAAAGGGAAACAGCTGGCCACTTGAAAATTTTA]

[+] EMBL AK066875             [GTCCTCCTCCTCCTCCTCTTGCTCCCCTTCCACTTCCTGGGAAAAAGCCTCTTGATCTCCCACTCTCTCTCACCCTCTCCGCTTCCAGCCGACTTCCGCCCTGCAGGTAAAGGTTTCAGCAATGAGGCAAGATGTTGCCTCCAAATGCGACAGCCGTTCTCGGTCAGGAGCAGCTCCTGAAATCATGCGATCCCCTCGCCGCACCATCGGAGAAAATGGCTATCGGGACACAAGACACCACCAGTTGAAATGCTCAGATGGCAACCTGGGAGAGCTACGCGTAGAGAGCATCCCAAATTTCCACTGCAAGAGCTTGCCCACAAGAAGCCGCAAGACCAATGCGGAGGATAGTATTGTGGGAAAGCGTGGTTCTATGTACCAGAGCTCTAGTGAAATTAGCATGATAAGAAAACTCCACGAAGGCAGGAGGAAGAAAATAGATTCTGCACTTGACGGGGATGCATTTCTGTCATTTGAGATTGTTGATTCATCCTCCCAGCCTAGCACAAGTGGAGCTTACCTTTTCTCGCATCAGAATCGCCGCTCAGAAGCTAAGTCTTCTGTGGAATCTCGTAGAATTCATCGAGCATCGAGGGACTTCCTGGATCTTTCATTCCGTGAGCTTCCTGATGAGAATTGTAGGCTGGACCGTCCACGCATGGATTGCACCCTGTTGAAAAATGATGCAGGCGATGGTTTCTTGGAGATCTCACTTGAGGAAGAGATGACCAAAGGTCCCTGCAGAAATGCAGCTCCTCAGTTGATAGGTGGAGAGTCAAGTAAAGGTACAGAAGCAAACTGCCTGCAAAACAAGATCAGTGTATGTCCCAGTGAGAATAATTGTAGTCAGAGAGAGAGGAATTCAACAAACAGTTTGCCTGAGTCCATGTCGGCCAAGGTGAGCATCTCTGATGGCACCCGTCCATCAGAAAGTGTTCGTCATGGCATAGAGAACAGCACTAAAGTTCGATCAAGCCCCTTCAAGAAGATTCTGGACCCTATTATGAAGTCCAAATCTATTAGAAGTCCATCTCTCATGGAAGACTCCAACCATGTTACTATGCCGGTTAACAGGAAAAATTGTGTATCCCGCAAATCATTGCTGAGTGATTTATCAAGGAGTGAACAAAGCCAATCAATTAATTGCCAGCTGAATGGAGAAAGGCAGCATACAACTAATGCTCTATCACCTGCTCATCTTCAGGCGGTTCTTAAATTGGATACCAAGAATGGTATTCCAGTTTTTGAGTTCTGTGTCAAGGGCCCTGAAGAATCCATTTCTGCTAGGAGTTGGAAAACAGGGAATGACTTGAACTGGATTTACACTTTCCACAGTGGTGGAAAACGAGCAAGTGCTACTGGAAGGGCCTCCAAAGATGGGCGTTGGTGTTCACCGCCGATTGTAGGCCAGATGCAAGCTTCTTCGTACTTGTGCTCTGAAGTTGGAAAAGATGGTGTTCTGACTAACTCTGTCATCACTGAGTTTGTTTTGTATGATATCGCTCATGCAAGACAGAGCTTTTCTGCTGAGGAGAAAACTCAATGTACAGAGACTACTCAATCGACATTGTCAAGTGCCGTCGAGAAATCAGCCTCTGGTGACTGTCCCCAGAGGATTAATCTGATGGACCAGCAAAACAGTGCAAGAAATAACTCTGATGTATCAACATCTTGTCCGTGGTCTGAAGAAGATCTTTATCCTCATTTGGAGATTGCAGCAACGGTCATCCAAGTTCCATTTAATAGAAGCAAGTCCAAAGAACTTAAGAGTGGTTTGTCACCTGGTACTGTAAAAGTGATTACACCGAGTGGGCTGCATGGGTTACCAAACGATGATGAAACCAGTCCATCACCTTTGCTGGATAGATGGAGGTACGGTGGAGGCTGCGACTGCGGTGGATGGGACATGGCTTGTCCCATTGCTGTCCTTGGCAATGCATATGATAATAACTGGGCCAATTCTGTCACAAAGGAAGGCGAGAATCCTATGGAACTCTTTGTTCTGGTACACTTCACTTCTCCTATCTTTATTTTTTGTGTGAAATCACTTTGGGCTATGCATGCTCTGGTTTCTAAGATACTTGGTTGCCTTCCTGCTAACTCTCCAAAGATAACCCAAGGCTGATCGAGAACTTCTTTTAAGAAAGATTGATCAAATTTTCCAAGTGTTAGATTTGCTCCTCCTAGAGAACTGCCCTTAGACCCACTTTTTCTTTAGTGTAGTAATCTTTTGTTTTCGTTGTGAGCTATAAAATCATATATGTTAACCATATGGCTCGCTTTAGTAATGCCTATGAGTTTATAGGAAGAAAATCGATAGCCTTGAGGCTTATTTTGAAGATCAAGGAAACAAGACAGACATTTGACCCTTAAAACCATTGTCAGTGACGTATCTAGGCTTATTCAGTATATCGACGATTCATCTCTGTTTTCATCCATGTATTGATCTTAGTCCAAAAATGAACAAGTTGTCATATTCTTCGAACAGGGTGGCAAAGAAGAGCTCCCTGCCCTTTCCATTAAGGGCAACGAGAAAGGACAGTTATTGGTGCATTTTCACGCGCGGTTATCAGCAATGCAAGCCTTCTCAACCTGCATTTCTCTGCTGCACTGTTCGGAAGCTTCGACAGCCGTAAGTATTGAGAAGGGCAAGCACAAGCTCTACTCCAGTTCACTTAAGATGCTGCTCGAGGAGGAAGTGAGCCAGCTGATCGAGGCAGTCACGGAAGAAGAGAAGAGGAAAACAAAGAAGAGAAGTGAGAAGCCACCCAGACCAGTTGTGCTCGACCCACCCTTCTCTCCCATGGGAAGAGTGTAGGTATTGTGAACAACTGTGTTCTCATGGTCATGGTGTGCAACATTATGAGTCATATTTGGGTTTCATGTCCATATTTTTTGTTGTGATAAAAGAAGCACTTTTATGCTGTTCATAAAGATGGAAGGTGCGTGTAGGGTTTTTTCTTATCTCTTTGTAGCTTTTAGCAGATCAGTAGCAAGGCAATATATCATTGTTGAATTGCCAGATAGAAGGAAGGAATTCTGTAGTTAGTAGTAGAGGGCAATGGCAGGTTCCATGAGAGAGGACATAAATAAAGGGAAACAGCTGGCCACTTGAAAATTTTA]
[+] EMBL CF307164             [                                                                                                                                                     ACAGCCGTTCTCGGTCAGGAGCAGCTCCTGAAAT ATGCGATCCCCTCGCCGCACCATCGGAGAAAATGGCTATCGGGACACAAGACACCACCAGTTGAAATGCTCAGATGGCAACCTGGGAGAGCTACGCGTAGAGAGCATCCCAAATTTCCACTGCAAGAGCTTGCCCACAAGAAGCCGCAAGACCAATGCGGAGGATAGTATTGTGGGAAAGCGTGGTTCTATGTACCAGAGCTCTAGTGAAATTAGCATGATAAGAAAACTCCACGAAGGCAGGAGGAAGAAAATAGATTCTGCACTTGACGGGGATGCATTTCTGTCATTTGAGATTGTTGATTCATCCTCCCAGCCTAGCACAAGTGGAGCTTACCTTTTCTCGCATCAGAATCGCCGCTCAGAAGCTAAGTCTTCTGTGGAATCTCGTAGAATTCATCGAGCATCGAGGGACTTCCTGGATCTTTCATTCCGTGAGCTTCCTGATGAGAATTGTAGGCTGGACCGTCCACGCATGGATTGCACCCTGTTGAAAAATGATGCAGGCGATGGTTTCTTGGAGATCTCACTTGAGGAAGAGATGACCAAAGGTCCCTGCAGAAATGCAGCTCCTCAGTTGATAGGTGGAGAGTCAAGTAAAGGTACAGAAGCAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_4378#0
GTCCTCCTCCTCCTCCTCTTGCTCCCCTTCCACTTCCTGGGAAAAAGCCTCTTGATCTCC
CACTCTCTCTCACCCTCTCCGCTTCCAGCCGACTTCCGCCCTGCAGGTAAAGGTTTCAGC
AATGAGGCAAGATGTTGCCTCCAAATGCGACAGCCGTTCTCGGTCAGGAGCAGCTCCTGA
AATCATGCGATCCCCTCGCCGCACCATCGGAGAAAATGGCTATCGGGACACAAGACACCA
CCAGTTGAAATGCTCAGATGGCAACCTGGGAGAGCTACGCGTAGAGAGCATCCCAAATTT
CCACTGCAAGAGCTTGCCCACAAGAAGCCGCAAGACCAATGCGGAGGATAGTATTGTGGG
AAAGCGTGGTTCTATGTACCAGAGCTCTAGTGAAATTAGCATGATAAGAAAACTCCACGA
AGGCAGGAGGAAGAAAATAGATTCTGCACTTGACGGGGATGCATTTCTGTCATTTGAGAT
TGTTGATTCATCCTCCCAGCCTAGCACAAGTGGAGCTTACCTTTTCTCGCATCAGAATCG
CCGCTCAGAAGCTAAGTCTTCTGTGGAATCTCGTAGAATTCATCGAGCATCGAGGGACTT
CCTGGATCTTTCATTCCGTGAGCTTCCTGATGAGAATTGTAGGCTGGACCGTCCACGCAT
GGATTGCACCCTGTTGAAAAATGATGCAGGCGATGGTTTCTTGGAGATCTCACTTGAGGA
AGAGATGACCAAAGGTCCCTGCAGAAATGCAGCTCCTCAGTTGATAGGTGGAGAGTCAAG
TAAAGGTACAGAAGCAAACTGCCTGCAAAACAAGATCAGTGTATGTCCCAGTGAGAATAA
TTGTAGTCAGAGAGAGAGGAATTCAACAAACAGTTTGCCTGAGTCCATGTCGGCCAAGGT
GAGCATCTCTGATGGCACCCGTCCATCAGAAAGTGTTCGTCATGGCATAGAGAACAGCAC
TAAAGTTCGATCAAGCCCCTTCAAGAAGATTCTGGACCCTATTATGAAGTCCAAATCTAT
TAGAAGTCCATCTCTCATGGAAGACTCCAACCATGTTACTATGCCGGTTAACAGGAAAAA
TTGTGTATCCCGCAAATCATTGCTGAGTGATTTATCAAGGAGTGAACAAAGCCAATCAAT
TAATTGCCAGCTGAATGGAGAAAGGCAGCATACAACTAATGCTCTATCACCTGCTCATCT
TCAGGCGGTTCTTAAATTGGATACCAAGAATGGTATTCCAGTTTTTGAGTTCTGTGTCAA
GGGCCCTGAAGAATCCATTTCTGCTAGGAGTTGGAAAACAGGGAATGACTTGAACTGGAT
TTACACTTTCCACAGTGGTGGAAAACGAGCAAGTGCTACTGGAAGGGCCTCCAAAGATGG
GCGTTGGTGTTCACCGCCGATTGTAGGCCAGATGCAAGCTTCTTCGTACTTGTGCTCTGA
AGTTGGAAAAGATGGTGTTCTGACTAACTCTGTCATCACTGAGTTTGTTTTGTATGATAT
CGCTCATGCAAGACAGAGCTTTTCTGCTGAGGAGAAAACTCAATGTACAGAGACTACTCA
ATCGACATTGTCAAGTGCCGTCGAGAAATCAGCCTCTGGTGACTGTCCCCAGAGGATTAA
TCTGATGGACCAGCAAAACAGTGCAAGAAATAACTCTGATGTATCAACATCTTGTCCGTG
GTCTGAAGAAGATCTTTATCCTCATTTGGAGATTGCAGCAACGGTCATCCAAGTTCCATT
TAATAGAAGCAAGTCCAAAGAACTTAAGAGTGGTTTGTCACCTGGTACTGTAAAAGTGAT
TACACCGAGTGGGCTGCATGGGTTACCAAACGATGATGAAACCAGTCCATCACCTTTGCT
GGATAGATGGAGGTACGGTGGAGGCTGCGACTGCGGTGGATGGGACATGGCTTGTCCCAT
TGCTGTCCTTGGCAATGCATATGATAATAACTGGGCCAATTCTGTCACAAAGGAAGGCGA
GAATCCTATGGAACTCTTTGTTCTGGTACACTTCACTTCTCCTATCTTTATTTTTTGTGT
GAAATCACTTTGGGCTATGCATGCTCTGGTTTCTAAGATACTTGGTTGCCTTCCTGCTAA
CTCTCCAAAGATAACCCAAGGCTGATCGAGAACTTCTTTTAAGAAAGATTGATCAAATTT
TCCAAGTGTTAGATTTGCTCCTCCTAGAGAACTGCCCTTAGACCCACTTTTTCTTTAGTG
TAGTAATCTTTTGTTTTCGTTGTGAGCTATAAAATCATATATGTTAACCATATGGCTCGC
TTTAGTAATGCCTATGAGTTTATAGGAAGAAAATCGATAGCCTTGAGGCTTATTTTGAAG
ATCAAGGAAACAAGACAGACATTTGACCCTTAAAACCATTGTCAGTGACGTATCTAGGCT
TATTCAGTATATCGACGATTCATCTCTGTTTTCATCCATGTATTGATCTTAGTCCAAAAA
TGAACAAGTTGTCATATTCTTCGAACAGGGTGGCAAAGAAGAGCTCCCTGCCCTTTCCAT
TAAGGGCAACGAGAAAGGACAGTTATTGGTGCATTTTCACGCGCGGTTATCAGCAATGCA
AGCCTTCTCAACCTGCATTTCTCTGCTGCACTGTTCGGAAGCTTCGACAGCCGTAAGTAT
TGAGAAGGGCAAGCACAAGCTCTACTCCAGTTCACTTAAGATGCTGCTCGAGGAGGAAGT
GAGCCAGCTGATCGAGGCAGTCACGGAAGAAGAGAAGAGGAAAACAAAGAAGAGAAGTGA
GAAGCCACCCAGACCAGTTGTGCTCGACCCACCCTTCTCTCCCATGGGAAGAGTGTAGGT
ATTGTGAACAACTGTGTTCTCATGGTCATGGTGTGCAACATTATGAGTCATATTTGGGTT
TCATGTCCATATTTTTTGTTGTGATAAAAGAAGCACTTTTATGCTGTTCATAAAGATGGA
AGGTGCGTGTAGGGTTTTTTCTTATCTCTTTGTAGCTTTTAGCAGATCAGTAGCAAGGCA
ATATATCATTGTTGAATTGCCAGATAGAAGGAAGGAATTCTGTAGTTAGTAGTAGAGGGC
AATGGCAGGTTCCATGAGAGAGGACATAAATAAAGGGAAACAGCTGGCCACTTGAAAATT
TTA

consensusID : consensus_4378#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1534
fasta sequence 
                              [AGTGATTTATCAAGGAGTGAACAAAGCCAATCAATTAATTGCCAGCTGAATGGAGAAAGGCAGCATACAACTAATGCTCTATCACCTGCTCATCTTCAGGCGGTTCTTAAATTGGATACCAAGAATGGTATTCCAGTTTTTGAGTTCTGTGTCAAGGGCCCTGAAGAATCCATTTCTGCTAGGAGTTGGAAAACAGGGAATGACTTGAACTGGATTTACACTTTCCACAGTGGTGGAAAACGAGCAAGTGCTACTGGAAGGGCCTCCAAAGATGGACGTTGGTGTTCACCGCCGATTGTAGGCCAGATGCAAGCTTCTTCGTACTTGTGCTCTGAAGTTGGAAAAGATGGTGTTCTGACTAACTCTGTCATCACTGAGTTTGTTTTGTATGATATCGCTCATGCAAGACAGAGCTTTTCTGCTGAGGAGAAAACTCAATGTACAGAGACTACTCAATCGACATTGTCAAGTGCCGTCGAGAAATCAGCCTCTGGTGACTGTCCCCAGAGGATTAATCTGATGGACCAGCAAAACAGTGCAAGAAATAACTCTGATGTATCAACATCTTGTCCGTGGTCTGAAGAAGATCTTTATCCTCATTTGGAGATTGCAGCAACGGTCATCCAAGTTCCATTTAATAGAAGCAAGTCCAAAGAACTTAAGAGTGGTTTGTCACCTGGTACTGTAAAAGTGATTACACCGAGTGGGCTGCATGGGTTACCAAACGATGATGAAACCAGTCCATCACCTTTGCTGGATAGATGGAGGTACGGTGGAGGCTGCGACTGCGGTGGATGGGACATGGCTTGTCCCATTGCTGTCCTTGGCAATGCATATGATAATAACTGGGCCAATTCTGTCACAAAGGAAGGCGAGAATCCTATGGAACTCTTTGTTCTGGGTGGCAAAGAAGAGCTCCCTGCCCTTTCCATTAAGGGCAACGAGAAAGGACAGTTATTGGTGCATTTTCACGCGCGGTTATCAGCAATGCAAGCCTTCTCAACCTGCATTTCTCTGCTGCACTGTTCGGAAGCTTCGACAGCCGTAAGTATTGAGAAGGGCAAGCACAAGCTCTACTCCAGTTCACTTAAGATGCTGCTCGAGGAGGAAGTGAGCCAGCTGATCGAGGCAGTCACGGCAGAAGAGAAGAGGAAAACAAAGAAGAGAAGTGAGAAGCCACCCAGACCAGTTGTGCTCGACCCACCCTTCTCTCCCATGGGAAGAGTGTAGGTATTGTGAACAACTGTGTTCTCATGGTCATGGTGTGCAACATTATGAGTCATATTTGGGTTTCATGTCCATATTTTTTGTTGTGATAAAAGAAGCACTTTTATGCTGTTCATAAAGATGGAAGGTGCGTGTAGGGTTTTTTCTTATCTCTTTGTAGCTTTTAGCAGATCAGTAGCAAGGCAATATATCATTGTTGAATTGCCAGATAGAAGGAAGGAATTCTGTAGTTAGTAGTAGAGGGCAATGGCAGGTTCCATGAGAGAGGACATAAATAAAGGGAAACAGCTGGCCACTTGAAAATTTT]

[+] EMBL AK064249             [AGTGATTTATCAAGGAGTGAACAAAGCCAATCAATTAATTGCCAGCTGAATGGAGAAAGGCAGCATACAACTAATGCTCTATCACCTGCTCATCTTCAGGCGGTTCTTAAATTGGATACCAAGAATGGTATTCCAGTTTTTGAGTTCTGTGTCAAGGGCCCTGAAGAATCCATTTCTGCTAGGAGTTGGAAAACAGGGAATGACTTGAACTGGATTTACACTTTCCACAGTGGTGGAAAACGAGCAAGTGCTACTGGAAGGGCCTCCAAAGATGGACGTTGGTGTTCACCGCCGATTGTAGGCCAGATGCAAGCTTCTTCGTACTTGTGCTCTGAAGTTGGAAAAGATGGTGTTCTGACTAACTCTGTCATCACTGAGTTTGTTTTGTATGATATCGCTCATGCAAGACAGAGCTTTTCTGCTGAGGAGAAAACTCAATGTACAGAGACTACTCAATCGACATTGTCAAGTGCCGTCGAGAAATCAGCCTCTGGTGACTGTCCCCAGAGGATTAATCTGATGGACCAGCAAAACAGTGCAAGAAATAACTCTGATGTATCAACATCTTGTCCGTGGTCTGAAGAAGATCTTTATCCTCATTTGGAGATTGCAGCAACGGTCATCCAAGTTCCATTTAATAGAAGCAAGTCCAAAGAACTTAAGAGTGGTTTGTCACCTGGTACTGTAAAAGTGATTACACCGAGTGGGCTGCATGGGTTACCAAACGATGATGAAACCAGTCCATCACCTTTGCTGGATAGATGGAGGTACGGTGGAGGCTGCGACTGCGGTGGATGGGACATGGCTTGTCCCATTGCTGTCCTTGGCAATGCATATGATAATAACTGGGCCAATTCTGTCACAAAGGAAGGCGAGAATCCTATGGAACTCTTTGTTCTGGGTGGCAAAGAAGAGCTCCCTGCCCTTTCCATTAAGGGCAACGAGAAAGGACAGTTATTGGTGCATTTTCACGCGCGGTTATCAGCAATGCAAGCCTTCTCAACCTGCATTTCTCTGCTGCACTGTTCGGAAGCTTCGACAGCCGTAAGTATTGAGAAGGGCAAGCACAAGCTCTACTCCAGTTCACTTAAGATGCTGCTCGAGGAGGAAGTGAGCCAGCTGATCGAGGCAGTCACGGCAGAAGAGAAGAGGAAAACAAAGAAGAGAAGTGAGAAGCCACCCAGACCAGTTGTGCTCGACCCACCCTTCTCTCCCATGGGAAGAGTGTAGGTATTGTGAACAACTGTGTTCTCATGGTCATGGTGTGCAACATTATGAGTCATATTTGGGTTTCATGTCCATATTTTTTGTTGTGATAAAAGAAGCACTTTTATGCTGTTCATAAAGATGGAAGGTGCGTGTAGGGTTTTTTCTTATCTCTTTGTAGCTTTTAGCAGATCAGTAGCAAGGCAATATATCATTGTTGAATTGCCAGATAGAAGGAAGGAATTCTGTAGTTAGTAGTAGAGGGCAATGGCAGGTTCCATGAGAGAGGACATAAATAAAGGGAAACAGCTGGCCACTTGAAAATTTT]




>consensus_4378#1
AGTGATTTATCAAGGAGTGAACAAAGCCAATCAATTAATTGCCAGCTGAATGGAGAAAGG
CAGCATACAACTAATGCTCTATCACCTGCTCATCTTCAGGCGGTTCTTAAATTGGATACC
AAGAATGGTATTCCAGTTTTTGAGTTCTGTGTCAAGGGCCCTGAAGAATCCATTTCTGCT
AGGAGTTGGAAAACAGGGAATGACTTGAACTGGATTTACACTTTCCACAGTGGTGGAAAA
CGAGCAAGTGCTACTGGAAGGGCCTCCAAAGATGGACGTTGGTGTTCACCGCCGATTGTA
GGCCAGATGCAAGCTTCTTCGTACTTGTGCTCTGAAGTTGGAAAAGATGGTGTTCTGACT
AACTCTGTCATCACTGAGTTTGTTTTGTATGATATCGCTCATGCAAGACAGAGCTTTTCT
GCTGAGGAGAAAACTCAATGTACAGAGACTACTCAATCGACATTGTCAAGTGCCGTCGAG
AAATCAGCCTCTGGTGACTGTCCCCAGAGGATTAATCTGATGGACCAGCAAAACAGTGCA
AGAAATAACTCTGATGTATCAACATCTTGTCCGTGGTCTGAAGAAGATCTTTATCCTCAT
TTGGAGATTGCAGCAACGGTCATCCAAGTTCCATTTAATAGAAGCAAGTCCAAAGAACTT
AAGAGTGGTTTGTCACCTGGTACTGTAAAAGTGATTACACCGAGTGGGCTGCATGGGTTA
CCAAACGATGATGAAACCAGTCCATCACCTTTGCTGGATAGATGGAGGTACGGTGGAGGC
TGCGACTGCGGTGGATGGGACATGGCTTGTCCCATTGCTGTCCTTGGCAATGCATATGAT
AATAACTGGGCCAATTCTGTCACAAAGGAAGGCGAGAATCCTATGGAACTCTTTGTTCTG
GGTGGCAAAGAAGAGCTCCCTGCCCTTTCCATTAAGGGCAACGAGAAAGGACAGTTATTG
GTGCATTTTCACGCGCGGTTATCAGCAATGCAAGCCTTCTCAACCTGCATTTCTCTGCTG
CACTGTTCGGAAGCTTCGACAGCCGTAAGTATTGAGAAGGGCAAGCACAAGCTCTACTCC
AGTTCACTTAAGATGCTGCTCGAGGAGGAAGTGAGCCAGCTGATCGAGGCAGTCACGGCA
GAAGAGAAGAGGAAAACAAAGAAGAGAAGTGAGAAGCCACCCAGACCAGTTGTGCTCGAC
CCACCCTTCTCTCCCATGGGAAGAGTGTAGGTATTGTGAACAACTGTGTTCTCATGGTCA
TGGTGTGCAACATTATGAGTCATATTTGGGTTTCATGTCCATATTTTTTGTTGTGATAAA
AGAAGCACTTTTATGCTGTTCATAAAGATGGAAGGTGCGTGTAGGGTTTTTTCTTATCTC
TTTGTAGCTTTTAGCAGATCAGTAGCAAGGCAATATATCATTGTTGAATTGCCAGATAGA
AGGAAGGAATTCTGTAGTTAGTAGTAGAGGGCAATGGCAGGTTCCATGAGAGAGGACATA
AATAAAGGGAAACAGCTGGCCACTTGAAAATTTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4378#0      GTCCTCCTCCTCCTCCTCTTGCTCCCCTTCCACTTCCTGGGAAAAAGCCTCTTGATCTCC 60
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      CACTCTCTCTCACCCTCTCCGCTTCCAGCCGACTTCCGCCCTGCAGGTAAAGGTTTCAGC 120
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      AATGAGGCAAGATGTTGCCTCCAAATGCGACAGCCGTTCTCGGTCAGGAGCAGCTCCTGA 180
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      AATCATGCGATCCCCTCGCCGCACCATCGGAGAAAATGGCTATCGGGACACAAGACACCA 240
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      CCAGTTGAAATGCTCAGATGGCAACCTGGGAGAGCTACGCGTAGAGAGCATCCCAAATTT 300
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      CCACTGCAAGAGCTTGCCCACAAGAAGCCGCAAGACCAATGCGGAGGATAGTATTGTGGG 360
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      AAAGCGTGGTTCTATGTACCAGAGCTCTAGTGAAATTAGCATGATAAGAAAACTCCACGA 420
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      AGGCAGGAGGAAGAAAATAGATTCTGCACTTGACGGGGATGCATTTCTGTCATTTGAGAT 480
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      TGTTGATTCATCCTCCCAGCCTAGCACAAGTGGAGCTTACCTTTTCTCGCATCAGAATCG 540
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      CCGCTCAGAAGCTAAGTCTTCTGTGGAATCTCGTAGAATTCATCGAGCATCGAGGGACTT 600
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      CCTGGATCTTTCATTCCGTGAGCTTCCTGATGAGAATTGTAGGCTGGACCGTCCACGCAT 660
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      GGATTGCACCCTGTTGAAAAATGATGCAGGCGATGGTTTCTTGGAGATCTCACTTGAGGA 720
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      AGAGATGACCAAAGGTCCCTGCAGAAATGCAGCTCCTCAGTTGATAGGTGGAGAGTCAAG 780
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      TAAAGGTACAGAAGCAAACTGCCTGCAAAACAAGATCAGTGTATGTCCCAGTGAGAATAA 840
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      TTGTAGTCAGAGAGAGAGGAATTCAACAAACAGTTTGCCTGAGTCCATGTCGGCCAAGGT 900
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      GAGCATCTCTGATGGCACCCGTCCATCAGAAAGTGTTCGTCATGGCATAGAGAACAGCAC 960
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      TAAAGTTCGATCAAGCCCCTTCAAGAAGATTCTGGACCCTATTATGAAGTCCAAATCTAT 1020
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      TAGAAGTCCATCTCTCATGGAAGACTCCAACCATGTTACTATGCCGGTTAACAGGAAAAA 1080
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      TTGTGTATCCCGCAAATCATTGCTGAGTGATTTATCAAGGAGTGAACAAAGCCAATCAAT 1140
consensus_4378#1      -------------------------AGTGATTTATCAAGGAGTGAACAAAGCCAATCAAT 35
                                               ***********************************

consensus_4378#0      TAATTGCCAGCTGAATGGAGAAAGGCAGCATACAACTAATGCTCTATCACCTGCTCATCT 1200
consensus_4378#1      TAATTGCCAGCTGAATGGAGAAAGGCAGCATACAACTAATGCTCTATCACCTGCTCATCT 95
                      ************************************************************

consensus_4378#0      TCAGGCGGTTCTTAAATTGGATACCAAGAATGGTATTCCAGTTTTTGAGTTCTGTGTCAA 1260
consensus_4378#1      TCAGGCGGTTCTTAAATTGGATACCAAGAATGGTATTCCAGTTTTTGAGTTCTGTGTCAA 155
                      ************************************************************

consensus_4378#0      GGGCCCTGAAGAATCCATTTCTGCTAGGAGTTGGAAAACAGGGAATGACTTGAACTGGAT 1320
consensus_4378#1      GGGCCCTGAAGAATCCATTTCTGCTAGGAGTTGGAAAACAGGGAATGACTTGAACTGGAT 215
                      ************************************************************

consensus_4378#0      TTACACTTTCCACAGTGGTGGAAAACGAGCAAGTGCTACTGGAAGGGCCTCCAAAGATGG 1380
consensus_4378#1      TTACACTTTCCACAGTGGTGGAAAACGAGCAAGTGCTACTGGAAGGGCCTCCAAAGATGG 275
                      ************************************************************

consensus_4378#0      GCGTTGGTGTTCACCGCCGATTGTAGGCCAGATGCAAGCTTCTTCGTACTTGTGCTCTGA 1440
consensus_4378#1      ACGTTGGTGTTCACCGCCGATTGTAGGCCAGATGCAAGCTTCTTCGTACTTGTGCTCTGA 335
                       ***********************************************************

consensus_4378#0      AGTTGGAAAAGATGGTGTTCTGACTAACTCTGTCATCACTGAGTTTGTTTTGTATGATAT 1500
consensus_4378#1      AGTTGGAAAAGATGGTGTTCTGACTAACTCTGTCATCACTGAGTTTGTTTTGTATGATAT 395
                      ************************************************************

consensus_4378#0      CGCTCATGCAAGACAGAGCTTTTCTGCTGAGGAGAAAACTCAATGTACAGAGACTACTCA 1560
consensus_4378#1      CGCTCATGCAAGACAGAGCTTTTCTGCTGAGGAGAAAACTCAATGTACAGAGACTACTCA 455
                      ************************************************************

consensus_4378#0      ATCGACATTGTCAAGTGCCGTCGAGAAATCAGCCTCTGGTGACTGTCCCCAGAGGATTAA 1620
consensus_4378#1      ATCGACATTGTCAAGTGCCGTCGAGAAATCAGCCTCTGGTGACTGTCCCCAGAGGATTAA 515
                      ************************************************************

consensus_4378#0      TCTGATGGACCAGCAAAACAGTGCAAGAAATAACTCTGATGTATCAACATCTTGTCCGTG 1680
consensus_4378#1      TCTGATGGACCAGCAAAACAGTGCAAGAAATAACTCTGATGTATCAACATCTTGTCCGTG 575
                      ************************************************************

consensus_4378#0      GTCTGAAGAAGATCTTTATCCTCATTTGGAGATTGCAGCAACGGTCATCCAAGTTCCATT 1740
consensus_4378#1      GTCTGAAGAAGATCTTTATCCTCATTTGGAGATTGCAGCAACGGTCATCCAAGTTCCATT 635
                      ************************************************************

consensus_4378#0      TAATAGAAGCAAGTCCAAAGAACTTAAGAGTGGTTTGTCACCTGGTACTGTAAAAGTGAT 1800
consensus_4378#1      TAATAGAAGCAAGTCCAAAGAACTTAAGAGTGGTTTGTCACCTGGTACTGTAAAAGTGAT 695
                      ************************************************************

consensus_4378#0      TACACCGAGTGGGCTGCATGGGTTACCAAACGATGATGAAACCAGTCCATCACCTTTGCT 1860
consensus_4378#1      TACACCGAGTGGGCTGCATGGGTTACCAAACGATGATGAAACCAGTCCATCACCTTTGCT 755
                      ************************************************************

consensus_4378#0      GGATAGATGGAGGTACGGTGGAGGCTGCGACTGCGGTGGATGGGACATGGCTTGTCCCAT 1920
consensus_4378#1      GGATAGATGGAGGTACGGTGGAGGCTGCGACTGCGGTGGATGGGACATGGCTTGTCCCAT 815
                      ************************************************************

consensus_4378#0      TGCTGTCCTTGGCAATGCATATGATAATAACTGGGCCAATTCTGTCACAAAGGAAGGCGA 1980
consensus_4378#1      TGCTGTCCTTGGCAATGCATATGATAATAACTGGGCCAATTCTGTCACAAAGGAAGGCGA 875
                      ************************************************************

consensus_4378#0      GAATCCTATGGAACTCTTTGTTCTGGTACACTTCACTTCTCCTATCTTTATTTTTTGTGT 2040
consensus_4378#1      GAATCCTATGGAACTCTTTGTTCTGG---------------------------------- 901
                      **************************                                  

consensus_4378#0      GAAATCACTTTGGGCTATGCATGCTCTGGTTTCTAAGATACTTGGTTGCCTTCCTGCTAA 2100
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      CTCTCCAAAGATAACCCAAGGCTGATCGAGAACTTCTTTTAAGAAAGATTGATCAAATTT 2160
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      TCCAAGTGTTAGATTTGCTCCTCCTAGAGAACTGCCCTTAGACCCACTTTTTCTTTAGTG 2220
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      TAGTAATCTTTTGTTTTCGTTGTGAGCTATAAAATCATATATGTTAACCATATGGCTCGC 2280
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      TTTAGTAATGCCTATGAGTTTATAGGAAGAAAATCGATAGCCTTGAGGCTTATTTTGAAG 2340
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      ATCAAGGAAACAAGACAGACATTTGACCCTTAAAACCATTGTCAGTGACGTATCTAGGCT 2400
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      TATTCAGTATATCGACGATTCATCTCTGTTTTCATCCATGTATTGATCTTAGTCCAAAAA 2460
consensus_4378#1      ------------------------------------------------------------
                                                                                  

consensus_4378#0      TGAACAAGTTGTCATATTCTTCGAACAGGGTGGCAAAGAAGAGCTCCCTGCCCTTTCCAT 2520
consensus_4378#1      -----------------------------GTGGCAAAGAAGAGCTCCCTGCCCTTTCCAT 932
                                                   *******************************

consensus_4378#0      TAAGGGCAACGAGAAAGGACAGTTATTGGTGCATTTTCACGCGCGGTTATCAGCAATGCA 2580
consensus_4378#1      TAAGGGCAACGAGAAAGGACAGTTATTGGTGCATTTTCACGCGCGGTTATCAGCAATGCA 992
                      ************************************************************

consensus_4378#0      AGCCTTCTCAACCTGCATTTCTCTGCTGCACTGTTCGGAAGCTTCGACAGCCGTAAGTAT 2640
consensus_4378#1      AGCCTTCTCAACCTGCATTTCTCTGCTGCACTGTTCGGAAGCTTCGACAGCCGTAAGTAT 1052
                      ************************************************************

consensus_4378#0      TGAGAAGGGCAAGCACAAGCTCTACTCCAGTTCACTTAAGATGCTGCTCGAGGAGGAAGT 2700
consensus_4378#1      TGAGAAGGGCAAGCACAAGCTCTACTCCAGTTCACTTAAGATGCTGCTCGAGGAGGAAGT 1112
                      ************************************************************

consensus_4378#0      GAGCCAGCTGATCGAGGCAGTCACGGAAGAAGAGAAGAGGAAAACAAAGAAGAGAAGTGA 2760
consensus_4378#1      GAGCCAGCTGATCGAGGCAGTCACGGCAGAAGAGAAGAGGAAAACAAAGAAGAGAAGTGA 1172
                      ************************** *********************************

consensus_4378#0      GAAGCCACCCAGACCAGTTGTGCTCGACCCACCCTTCTCTCCCATGGGAAGAGTGTAGGT 2820
consensus_4378#1      GAAGCCACCCAGACCAGTTGTGCTCGACCCACCCTTCTCTCCCATGGGAAGAGTGTAGGT 1232
                      ************************************************************

consensus_4378#0      ATTGTGAACAACTGTGTTCTCATGGTCATGGTGTGCAACATTATGAGTCATATTTGGGTT 2880
consensus_4378#1      ATTGTGAACAACTGTGTTCTCATGGTCATGGTGTGCAACATTATGAGTCATATTTGGGTT 1292
                      ************************************************************

consensus_4378#0      TCATGTCCATATTTTTTGTTGTGATAAAAGAAGCACTTTTATGCTGTTCATAAAGATGGA 2940
consensus_4378#1      TCATGTCCATATTTTTTGTTGTGATAAAAGAAGCACTTTTATGCTGTTCATAAAGATGGA 1352
                      ************************************************************

consensus_4378#0      AGGTGCGTGTAGGGTTTTTTCTTATCTCTTTGTAGCTTTTAGCAGATCAGTAGCAAGGCA 3000
consensus_4378#1      AGGTGCGTGTAGGGTTTTTTCTTATCTCTTTGTAGCTTTTAGCAGATCAGTAGCAAGGCA 1412
                      ************************************************************

consensus_4378#0      ATATATCATTGTTGAATTGCCAGATAGAAGGAAGGAATTCTGTAGTTAGTAGTAGAGGGC 3060
consensus_4378#1      ATATATCATTGTTGAATTGCCAGATAGAAGGAAGGAATTCTGTAGTTAGTAGTAGAGGGC 1472
                      ************************************************************

consensus_4378#0      AATGGCAGGTTCCATGAGAGAGGACATAAATAAAGGGAAACAGCTGGCCACTTGAAAATT 3120
consensus_4378#1      AATGGCAGGTTCCATGAGAGAGGACATAAATAAAGGGAAACAGCTGGCCACTTGAAAATT 1532
                      ************************************************************

consensus_4378#0      TTA 3123
consensus_4378#1      TT- 1534
                      **


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)