cluster # 4407

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Oryza sativa
cluster # 4407 cluster # 4407 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4407#0 length = 710 sequences # 3

consensusID : consensus_4407#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 710
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAGCCAATTGAAACGTCGTATGTTTTTTTTTCTCCGTCAAATACCCCCGTAAATCTCACCCCCTACACCCAGCTTTTTTTGGATGGGCTGAAACATCAGCCTCCAAAACAGCAGCCCTCATTTTTAAACCTCAAAAAATGAACCCTAAAGTTTCATCATTTTTCAGTCGCCATTCCTAAAACTGTTACTATATTCAGCAGTTGATTATCTGGTTTCATACATTCTGTATTTCTCGTTCTAGTGCTCTCCAGCATTGGCAGCAGCAGTCATTACTGTTACTGAGACTTGGTACGGAAAGCGTACATAAGTTTTCCTCGGTGTCACAATCTGAATCTGAGTGAA-GGTTGTGTTCATCATTTCCTTCTCTGAGGATCCCGGCTAAGACCATGCTTTCTCAAAGTTCTGATATAATTTCGCGTCAGACTGAACTTTTTAGAACCCAGATGATGCAAGTAATCCCATGTGAAGATCCCCGTCT-TGTGCAAATCATCAAATAGTATCCGAATTCCATAGTTTCCTAC-TGATTCAGCTGACATTATTCCAACATACCGTCGCCCAAATATAACCTTCTCACCAGATACTGATATT-ATT-T-GCTGTCAGCT-GCTGGACTATGTACTCTTAG-AAATTCAGCTGACAGATGGAATGAGCTACCATCAGTGAATTCAACTCCACCGATCTGGG]

[+] EMBL CF292873             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAGCCAATTGAAACGTCGTATGTTTTTTTTTCTCCGTCAAATACCCCCGTAAATCTCACCCCCTACACCCAGCTTTTTTTGGATGGGCTGAAACATCAGCCTCCAAAACAGCAGCCCTCATTTTTAAACCTCAAAAAATGAACCCTAAAGTTTCATCAGTTTTCAGTCCCCATTCCTAAAACTGTTACTATATTCAGCAGTTGATTATCTGGTTTCATACATTCTGTATTTCTCGTTCTAGGGCTCTCCAGCATTGGCAGCAGCAGTCATTACTGTTACTGAAACTTGGTACGGAAAGCGTACATAAGTTTTCCTCGG GTCACAATCTGAATCTGAGGGAAGGGTTGGGTTCATCATTTCCTTCTCTGAGGATCCCGGCTAAAACCATGCTTTCTCAAAGTTCTGATATAATTTCGCGTCAAACTGAACTTTTTAAAACCCAAATGATGCAAGTAATCCCATGTGAAAATCCCCGTCT TGGGCAAATCATCAAATAGTATCCGAATTCCATAGTTTCCTAC TGATTCAGCTGACATTATT                                                                                                                                                  ]
[-] EMBL BI803904             [                                                                                                                                                                                           TTTTTCAGTCGCCATTCCTAAAACTGTTACTATATTCAGCAGTTGATTATCTGGTTTCATACATTCTGTATTTCTCGTTCTAGTGCTCTCCAGCATTGGCAGCAGCAGTCATTACTGTTACTGAGACTTGGTACGGAAAGCGTACATAAGTTTTCCTCGGTGTCACAATCTGAATCTGAGTGAA GGTTGTGTTCATCATTTCCTTCTCTGAGGATCCCGGCTAAGACCATGCTTTCTCAAAGTTCTGATATAATTTCGCGTCAGACTGAACTTTTTAGAACCCAGATGATGCAAGTAATCCCATGTGAAGATCCCCGTCT TGTGCAAATCATCAAATAGTATCCGAATTCCATAGTTTCCTAC TGATTCAGCTGACATTATTCCAACATACCGTCGCCCAAATATAACCTTCTCACCAGATACTGATATT ATT T GCTGTCAGCT GCTGGACTATGTACTCTTAG AAATTCAGCTGACAGATGGAATGAGCTACCATCAGTGAATTCAACTCCACCGATCTGGG]
[-] EMBL BI804209             [                                                                                                                                                                                           TTTTTCAGTCGCCATTCCTAAAACTGTTACTATATTCAGCAGTTGATTATCTGGTTTCATACATTCTGTATTTCTCGTTCTAGTGCTCTCCAGCA TGGCAGCAGCAGTCATTACTGTTACTGAGACTTGGTACGGAAAGCGTACATAAGTTTTCCTCGGTGTCACAATCTGAATCTGAGTGAA GGTTGTGTTCATCATTTCCTTCTCTGAGGATCCCGGCTAAGACCATGCTTTCTCAAAGTTCTGATATAATTTCGCGTCAGACTGAACTTTTTAGAACCCAGATGATGCAAGTAATCCCATGTGAAGATCCCCGTCTGTGTGCAAATCATCAAATAGTATCCGAATTCCATAGTTTCCTACGTGATTCAGCTGACATTATTCCAACATACCGTCGCCCAAATATAACCTTCTCACCAGATACTGATATTCATTGTGGCTGTCAGCTGGCTGGACTATGTACTCTTAGCAAATTCAGCTGACAGATGGAATGAGCTACCATCAGTGAATTCA                ]




>consensus_4407#0
TTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAGCCAATTGAAACGTCGTATGTTTTTTTTT
CTCCGTCAAATACCCCCGTAAATCTCACCCCCTACACCCAGCTTTTTTTGGATGGGCTGA
AACATCAGCCTCCAAAACAGCAGCCCTCATTTTTAAACCTCAAAAAATGAACCCTAAAGT
TTCATCATTTTTCAGTCGCCATTCCTAAAACTGTTACTATATTCAGCAGTTGATTATCTG
GTTTCATACATTCTGTATTTCTCGTTCTAGTGCTCTCCAGCATTGGCAGCAGCAGTCATT
ACTGTTACTGAGACTTGGTACGGAAAGCGTACATAAGTTTTCCTCGGTGTCACAATCTGA
ATCTGAGTGAAGGTTGTGTTCATCATTTCCTTCTCTGAGGATCCCGGCTAAGACCATGCT
TTCTCAAAGTTCTGATATAATTTCGCGTCAGACTGAACTTTTTAGAACCCAGATGATGCA
AGTAATCCCATGTGAAGATCCCCGTCTTGTGCAAATCATCAAATAGTATCCGAATTCCAT
AGTTTCCTACTGATTCAGCTGACATTATTCCAACATACCGTCGCCCAAATATAACCTTCT
CACCAGATACTGATATTATTTGCTGTCAGCTGCTGGACTATGTACTCTTAGAAATTCAGC
TGACAGATGGAATGAGCTACCATCAGTGAATTCAACTCCACCGATCTGGG

clustalw multiple alignements is not computed in this case