cluster # 4419

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Oryza sativa
cluster # 4419 cluster # 4419 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4419#0 length = 522 sequences # 3

consensusID : consensus_4419#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 522
fasta sequence

                              [GCTCATCGAATCCAAGGCGCC-CCGCC-CC-CC-GCCATCCCTGTC-GGCCGCCTGCACTGACTGAACATGGCGATGAGCTCATGCTCCA-CAGCAGCAGCATCAGCAACAGC-AGCAACAGAGTGTC-ATCCAAATGATTGATCCTCTTCAGATGCTCCCAGGGATGGGTTGAATTCGGTATCTATTCTGCAGTTCTGCTCACTACTTCTTGGTATTAGTTGGGTCGTTACTCCGTGAATCCAATGCTTGTTTTATGTACCTATTGTTCTGTATTGGGGGAGATTGGAAGAGGGTAGAGCTGAAAATGAGGACTTGGGGGGAACTATTTAATGAACCAATTAGCTTCGTGTCGTTCATCTCGTCAACTTCTTGGAAATGTTGGGTCCTTAGTCCATAAATCCGATGCTTGTTTAGTTTTATGTATCTATTGTTCTGTATTGGGGGAGATTGGAAGAGAGTAGACCTGAAAATGAGAGGAGTTGGGAGAACTATTTAATGAATCATTAGCTTCGTGTTGTTAAAAAAAAA]

[+] EMBL BI813338             [GCTCATCGAATCCAAGGCGCC CCGCC CC CC GCCATCCCTGTC GGCCGCCTGCACTGACTGAACATGGCGATGAGCTCATGCTCCA CAGCAGCAGCATCAGCAACAGC AGCAACAGAGTGTC ATCCAAATGATTGATCCTCTTCAGATGCTCCCAGGGATGGGTTGAATTCGGTATCTATTCTGCAGTTCTGCTCACTACTTCTTGGTATTAGTTGGGTCGTTACTCCGTGAATCCAATGCTTGTTTTATGTACCTATTGTTCTGTATTGGGGGAGATTGGAAGAGGGTAGAGCTGAAAATGAGGACTTGGGGGGAACTATTTAATGAACCAATTAGCTTCGTGTCGTTCATCTCGTCAACTTCTTGGAAATGTTGGGTCCTTAGTCCATAAATCCGATGCTTGTTTAGTTTTATGTATCTATTGTTCTGTATTGGGGGAGATTGGAAGAGAGTAGACCTGAAAATGAGAGGAGTTGGGAGAACTATTTAATGAATCATTAGCTTCGTGTTGTTAAAAAAAAA]
[-] EMBL CA882814             [GCTCATCGAATCCAAGGCGCCGCCGCCGCCGCCGGCCATCCCTGTCGGGCCGCCTGCACTGACTGAACATGGCGATGAGCTCATGCTCCAGCAGCAGCAGCATCAGCAACAGC AGCAACAGAGTGTC ATCCAAATGATTGATCCTCTTCAGATGCTCCCAGGGATGGGTTGAATTCGGTATCTATTCTGCAGTTCTGCTCACTACTTCTTGGTATTAGTTGGGTCGTTACTCCGTGAATCCAATGCTT                                                                                                                                                                                                                                                                                        ]
[+] EMBL BQ907354             [                                                GCC CCTGCACTGACTGAACAT GCGATGAGCTCATGCTCCA CAGCA CAGCATCAGCAACAACAAGCAACAGAGTGTCAATCCAAATGATTGATCCTCTTCAGATGCTCCCAGGGAT GGTTGAATTCGGTATCTATTCT CAGTTCTGCTCACTACTTCTTGGTATTAGTTGGGTCGTTACTCCGTGAATCCAATGCTTGTTTTATGTACCTATTGTTCTGTATTGGGGGAGATTGGAAGAGGGTAGAGCTGAAAATGAGGACTTGGGGGGAACTATTTAATGAACCCATTAGCTTCGTGTCGTTCATCTCGTCAACTTCTTGGAAATGTTGGGTCCTTAGTCCATAAATCCGATGCTTGTTTAGTTTTATGTATCTATTGTTCTGTATTGGGGGAGATTGGAAGAGAGTAGACCTGAAAATGAGAGGAGTTGGGAGAACTATTTAATGAATCATTAGCTTCGTG    TAAAAAAAAA]




>consensus_4419#0
GCTCATCGAATCCAAGGCGCCCCGCCCCCCGCCATCCCTGTCGGCCGCCTGCACTGACTG
AACATGGCGATGAGCTCATGCTCCACAGCAGCAGCATCAGCAACAGCAGCAACAGAGTGT
CATCCAAATGATTGATCCTCTTCAGATGCTCCCAGGGATGGGTTGAATTCGGTATCTATT
CTGCAGTTCTGCTCACTACTTCTTGGTATTAGTTGGGTCGTTACTCCGTGAATCCAATGC
TTGTTTTATGTACCTATTGTTCTGTATTGGGGGAGATTGGAAGAGGGTAGAGCTGAAAAT
GAGGACTTGGGGGGAACTATTTAATGAACCAATTAGCTTCGTGTCGTTCATCTCGTCAAC
TTCTTGGAAATGTTGGGTCCTTAGTCCATAAATCCGATGCTTGTTTAGTTTTATGTATCT
ATTGTTCTGTATTGGGGGAGATTGGAAGAGAGTAGACCTGAAAATGAGAGGAGTTGGGAG
AACTATTTAATGAATCATTAGCTTCGTGTTGTTAAAAAAAAA

clustalw multiple alignements is not computed in this case