Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4448 cluster # 4448       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4448#0 length = 2543 sequences # 2  
 consensus_4448#1 length = 522 sequences # 1  
consensusID : consensus_4448#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2543
fasta sequence 
                              [TAGTGTAGATGTGTGAAAGTTAAAACCAGCCGGGTCACTTCGCTTCCTGTGGCAGCACAGCTAGCGCGTGGCCATGGACGACCACCAGAGCAAGGTGCAGCGGCTGTACGACGCGTGCGACGCCGTCTTCTCGTCGGGGAGTAAAGCAGGGTTGCCGACGCTCAAGCAGATCAGGTGGCTGCAAGACCTGCTCGATGGCATGGAGGCGGCGGACGTCGGGATCGAAGGCGGCGGCAGCGGCGGCGAGAGGTCGTCGTCCTCGGAGGACGACGACGAGAGGAGCCCGCCGGGGCGGCGGTTTCTCTCGGCGCGGGCGTTCACCCGGATCACCTACGTGCACATCCACGAGTGCGACGATTTCTCGATCGGCGTGTTCTGCTTCCCGGCCGGCGCGACGCTGCCGCTGCACGACCACCCGCAAATGGTGGTGCTGAGCAAGCTTCTCTACGGCTCGATGCGGGTCAAGTCGTACGACTGGGCGAACGCGCCCCCGTGCTCGGGCCCAAGGAAGAGTAAGCATTTGTCTCAGCTGCATGCGAATGCATGCGCCTGTTTGCCGTCGATTCGCTCGCTGATGATCAATCGACAAAAAAACTCGATCGTTTTCTGATGTCAAGTTGTCAACTGCATCTAACATTTGTTCCTTGTCTCACCTACATATACTAGTTTGAGGTTACCTGGCTATGATCAAGGACAGAAAAAGGTCTCTGATAATTTACAAGCAGGATGAGATTAATACCTCCCTACAAAATCCTTGTAAAAGACGGTTTCAGATAGCCAAATCCCACCGATGTCTCACCAAACCAGCATTTTTTTTCAGCAATATAAACAGGAGAACCTATCTCTCCCTGTCCACTGCTCTACTCTTGATACAGTTTTTAATGGTTTGGAATTTGCAAAAGATAGCTCTCGCCTGAAACTGGAATAACTTTTTGGATACTTGCAGCCTCTGTCGATTAATTTTTGAATTACTACTAGCTTACTTCGGTTGGAAGCCCAAGCCACGTGCTGTTGGAAAAACAACAGTGTACATAGAATGAAACAACTGCACTACTAGTAGTATCAGAAATTGCCGTTTTTATACTAAGAAAAAAAAAAGAAAAGTAAGTGACGCCATCCCACTGCTTTCCAATATGGCAAGATATCCAAAAGTCCACCAATCCTCTCAAGAAGAGACAGTAACGAAATTCTCACAGGAATATAGTATTTTTCATGCAGGTGGTTTAGCCCGAGTGGTCGCCGTCGACGAGATGCGGGAGGCGCCGTGCAAGGCGTCGGTCCTGTTCCCGCGGAGCGGCGGCAACATCCACTCCCTCACCGCCGTCACGCCGTGCGCGCTCCTCGACGTGCTAGCGCCGCCCTACGCCGAGGACCTCGGCCGGCCGTCCACCTACTTCTCCGACATTCCCATCCCCTCTCTCCCTGGTACGCACACAACATGCATGCATAGGAATCGCTAACCTTCATTCGATATAAAATACCTTCAAATATTACATATTTTGGATCATTGGGTGTGCTTCACGTTTCATGCTCCTGTCTTTTTTTTTAAGCCCCGATGATCTCCTCATCTTTTCCAACACTGGCAACATTCCAAACTTTGATAGAGAACTTACGGATTAGAGTCCTAGGTTAGAGAAGTTCGTTAGTTTTAGAGGATAACCTAGGAGGCAACAGTTCGGGTGGGCAGCAAGGCGACCGCGGTATTGCCAAAACTACAGGGTCGGAAGTGGATAGTGGGCCGGTGGGCTGGTGGGGAAATGTAGAACAAAGTTAGGAGGTGGTGGCGGATCCAGTTATGGGGAGCCACGGGAAGATGGCGGCACAGGGGTAGCCGGCTTGAGGACAAGGTGAGGAGAGGAAGCGGGGAAGAGGCTAGCTTAGGGATCTTACCGATGTTGTTGACCACTTCTAGTCAGTTGACAAGCTTGGGTGGCAGCGGCGATGGTGGTGGTAGTGGCGATAAGGGGAAGTCGGAAGAAAGAGAGAGTAAGGGAGGGGTTTGAAGGTTTGGTTGTCTTGTACTCCCTCTGTCCCATAGAAAACCTAATAGGCTAGTACATATATCTAGATTCATTGTATTAGAATATGTCAAATCTAGTTTTAGATTTTTTTTTTGACGAAGGGAGTAGTACACAACATAAAGTAATCGGGCGGTCTAAAATATTAAAGGATTTTTTGTCAAATGATGATAGAAGGTCCCTAATTTGCATAGCAGCACAGGTGACCGTGGAATGATGATCTGTTGAGATTTCTGACAGTGTGATGGCTTTCTCTCAGGTTTTGCAGTACTGGAAGAGGCAGACTTGCCTGACGGTTTCCGTGTTGCAGGGGCCCCATATGTAGGCCCCGAGCTCACAATAGACATGGACAGCATGTATAATTAGATAGCTGATCTCTGCTTTTCCAGAGTATCAGATCAGATAGCTCTCACTGCTTTTCTTAAAGTAGCATTTGCATGGACAATACATTGCACCTCGCCATCTTGTATATACGATTATGCATGTGTGTTGTCGGTTTGTCTTTCTACCATGCTTATCTACCAG]

[+] EMBL AK103634             [TAGTGTAGATGTGTGAAAGTTAAAACCAGCCGGGTCACTTCGCTTCCTGTGGCAGCACAGCTAGCGCGTGGCCATGGACGACCACCAGAGCAAGGTGCAGCGGCTGTACGACGCGTGCGACGCCGTCTTCTCGTCGGGGAGTAAAGCAGGGTTGCCGACGCTCAAGCAGATCAGGTGGCTGCAAGACCTGCTCGATGGCATGGAGGCGGCGGACGTCGGGATCGAAGGCGGCGGCAGCGGCGGCGAGAGGTCGTCGTCCTCGGAGGACGACGACGAGAGGAGCCCGCCGGGGCGGCGGTTTCTCTCGGCGCGGGCGTTCACCCGGATCACCTACGTGCACATCCACGAGTGCGACGATTTCTCGATCGGCGTGTTCTGCTTCCCGGCCGGCGCGACGCTGCCGCTGCACGACCACCCGCAAATGGTGGTGCTGAGCAAGCTTCTCTACGGCTCGATGCGGGTCAAGTCGTACGACTGGGCGAACGCGCCCCCGTGCTCGGGCCCAAGGAAGAGTAAGCATTTGTCTCAGCTGCATGCGAATGCATGCGCCTGTTTGCCGTCGATTCGCTCGCTGATGATCAATCGACAAAAAAACTCGATCGTTTTCTGATGTCAAGTTGTCAACTGCATCTAACATTTGTTCCTTGTCTCACCTACATATACTAGTTTGAGGTTACCTGGCTATGATCAAGGACAGAAAAAGGTCTCTGATAATTTACAAGCAGGATGAGATTAATACCTCCCTACAAAATCCTTGTAAAAGACGGTTTCAGATAGCCAAATCCCACCGATGTCTCACCAAACCAGCATTTTTTTTCAGCAATATAAACAGGAGAACCTATCTCTCCCTGTCCACTGCTCTACTCTTGATACAGTTTTTAATGGTTTGGAATTTGCAAAAGATAGCTCTCGCCTGAAACTGGAATAACTTTTTGGATACTTGCAGCCTCTGTCGATTAATTTTTGAATTACTACTAGCTTACTTCGGTTGGAAGCCCAAGCCACGTGCTGTTGGAAAAACAACAGTGTACATAGAATGAAACAACTGCACTACTAGTAGTATCAGAAATTGCCGTTTTTATACTAAGAAAAAAAAAAGAAAAGTAAGTGACGCCATCCCACTGCTTTCCAATATGGCAAGATATCCAAAAGTCCACCAATCCTCTCAAGAAGAGACAGTAACGAAATTCTCACAGGAATATAGTATTTTTCATGCAGGTGGTTTAGCCCGAGTGGTCGCCGTCGACGAGATGCGGGAGGCGCCGTGCAAGGCGTCGGTCCTGTTCCCGCGGAGCGGCGGCAACATCCACTCCCTCACCGCCGTCACGCCGTGCGCGCTCCTCGACGTGCTAGCGCCGCCCTACGCCGAGGACCTCGGCCGGCCGTCCACCTACTTCTCCGACATTCCCATCCCCTCTCTCCCTGGTACGCACACAACATGCATGCATAGGAATCGCTAACCTTCATTCGATATAAAATACCTTCAAATATTACATATTTTGGATCATTGGGTGTGCTTCACGTTTCATGCTCCTGTCTTTTTTTTTAAGCCCCGATGATCTCCTCATCTTTTCCAACACTGGCAACATTCCAAACTTTGATAGAGAACTTACGGATTAGAGTCCTAGGTTAGAGAAGTTCGTTAGTTTTAGAGGATAACCTAGGAGGCAACAGTTCGGGTGGGCAGCAAGGCGACCGCGGTATTGCCAAAACTACAGGGTCGGAAGTGGATAGTGGGCCGGTGGGCTGGTGGGGAAATGTAGAACAAAGTTAGGAGGTGGTGGCGGATCCAGTTATGGGGAGCCACGGGAAGATGGCGGCACAGGGGTAGCCGGCTTGAGGACAAGGTGAGGAGAGGAAGCGGGGAAGAGGCTAGCTTAGGGATCTTACCGATGTTGTTGACCACTTCTAGTCAGTTGACAAGCTTGGGTGGCAGCGGCGATGGTGGTGGTAGTGGCGATAAGGGGAAGTCGGAAGAAAGAGAGAGTAAGGGAGGGGTTTGAAGGTTTGGTTGTCTTGTACTCCCTCTGTCCCATAGAAAACCTAATAGGCTAGTACATATATCTAGATTCATTGTATTAGAATATGTCAAATCTAGTTTTAGATTTTTTTTTTGACGAAGGGAGTAGTACACAACATAAAGTAATCGGGCGGTCTAAAATATTAAAGGATTTTTTGTCAAATGATGATAGAAGGTCCCTAATTTGCATAGCAGCACAGGTGACCGTGGAATGATGATCTGTTGAGATTTCTGACAGTGTGATGGCTTTCTCTCAGGTTTTGCAGTACTGGAAGAGGCAGACTTGCCTGACGGTTTCCGTGTTGCAGGGGCCCCATATGTAGGCCCCGAGCTCACAATAGACATGGACAGCATGTATAATTAGATAGCTGATCTCTGCTTTTCCAGAGTATCAGATCAGATAGCTCTCACTGCTTTTCTTAAAGTAGCATTTGCATGGACAATACATTGCACCTCGCCATCTTGTATATACGATTATGCATGTGTGTTGTCGGTTTGTCTTTCTACCATGCTTATCTACCAG]
[+] EMBL AU062909             [            nTGAAAGTNAAAACCAGCCGGGTCACTTCGNTTCCTGTGGCAGCACAGCTAGCNCGTGGCCATGGACGACCACCAGAGCAAGGTGCAGCGGCTGTACGACGCGTGCANCGCCGTCTTCTCGTCGGGNAGTAAAGCAGGGTTNCCGACGCTCAAGCAGATCAGGTGGCTGCANGACCTGCTCGATGGCATGGAGGCGGCGGACGTCGGGNTCGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]




>consensus_4448#0
TAGTGTAGATGTGTGAAAGTTAAAACCAGCCGGGTCACTTCGCTTCCTGTGGCAGCACAG
CTAGCGCGTGGCCATGGACGACCACCAGAGCAAGGTGCAGCGGCTGTACGACGCGTGCGA
CGCCGTCTTCTCGTCGGGGAGTAAAGCAGGGTTGCCGACGCTCAAGCAGATCAGGTGGCT
GCAAGACCTGCTCGATGGCATGGAGGCGGCGGACGTCGGGATCGAAGGCGGCGGCAGCGG
CGGCGAGAGGTCGTCGTCCTCGGAGGACGACGACGAGAGGAGCCCGCCGGGGCGGCGGTT
TCTCTCGGCGCGGGCGTTCACCCGGATCACCTACGTGCACATCCACGAGTGCGACGATTT
CTCGATCGGCGTGTTCTGCTTCCCGGCCGGCGCGACGCTGCCGCTGCACGACCACCCGCA
AATGGTGGTGCTGAGCAAGCTTCTCTACGGCTCGATGCGGGTCAAGTCGTACGACTGGGC
GAACGCGCCCCCGTGCTCGGGCCCAAGGAAGAGTAAGCATTTGTCTCAGCTGCATGCGAA
TGCATGCGCCTGTTTGCCGTCGATTCGCTCGCTGATGATCAATCGACAAAAAAACTCGAT
CGTTTTCTGATGTCAAGTTGTCAACTGCATCTAACATTTGTTCCTTGTCTCACCTACATA
TACTAGTTTGAGGTTACCTGGCTATGATCAAGGACAGAAAAAGGTCTCTGATAATTTACA
AGCAGGATGAGATTAATACCTCCCTACAAAATCCTTGTAAAAGACGGTTTCAGATAGCCA
AATCCCACCGATGTCTCACCAAACCAGCATTTTTTTTCAGCAATATAAACAGGAGAACCT
ATCTCTCCCTGTCCACTGCTCTACTCTTGATACAGTTTTTAATGGTTTGGAATTTGCAAA
AGATAGCTCTCGCCTGAAACTGGAATAACTTTTTGGATACTTGCAGCCTCTGTCGATTAA
TTTTTGAATTACTACTAGCTTACTTCGGTTGGAAGCCCAAGCCACGTGCTGTTGGAAAAA
CAACAGTGTACATAGAATGAAACAACTGCACTACTAGTAGTATCAGAAATTGCCGTTTTT
ATACTAAGAAAAAAAAAAGAAAAGTAAGTGACGCCATCCCACTGCTTTCCAATATGGCAA
GATATCCAAAAGTCCACCAATCCTCTCAAGAAGAGACAGTAACGAAATTCTCACAGGAAT
ATAGTATTTTTCATGCAGGTGGTTTAGCCCGAGTGGTCGCCGTCGACGAGATGCGGGAGG
CGCCGTGCAAGGCGTCGGTCCTGTTCCCGCGGAGCGGCGGCAACATCCACTCCCTCACCG
CCGTCACGCCGTGCGCGCTCCTCGACGTGCTAGCGCCGCCCTACGCCGAGGACCTCGGCC
GGCCGTCCACCTACTTCTCCGACATTCCCATCCCCTCTCTCCCTGGTACGCACACAACAT
GCATGCATAGGAATCGCTAACCTTCATTCGATATAAAATACCTTCAAATATTACATATTT
TGGATCATTGGGTGTGCTTCACGTTTCATGCTCCTGTCTTTTTTTTTAAGCCCCGATGAT
CTCCTCATCTTTTCCAACACTGGCAACATTCCAAACTTTGATAGAGAACTTACGGATTAG
AGTCCTAGGTTAGAGAAGTTCGTTAGTTTTAGAGGATAACCTAGGAGGCAACAGTTCGGG
TGGGCAGCAAGGCGACCGCGGTATTGCCAAAACTACAGGGTCGGAAGTGGATAGTGGGCC
GGTGGGCTGGTGGGGAAATGTAGAACAAAGTTAGGAGGTGGTGGCGGATCCAGTTATGGG
GAGCCACGGGAAGATGGCGGCACAGGGGTAGCCGGCTTGAGGACAAGGTGAGGAGAGGAA
GCGGGGAAGAGGCTAGCTTAGGGATCTTACCGATGTTGTTGACCACTTCTAGTCAGTTGA
CAAGCTTGGGTGGCAGCGGCGATGGTGGTGGTAGTGGCGATAAGGGGAAGTCGGAAGAAA
GAGAGAGTAAGGGAGGGGTTTGAAGGTTTGGTTGTCTTGTACTCCCTCTGTCCCATAGAA
AACCTAATAGGCTAGTACATATATCTAGATTCATTGTATTAGAATATGTCAAATCTAGTT
TTAGATTTTTTTTTTGACGAAGGGAGTAGTACACAACATAAAGTAATCGGGCGGTCTAAA
ATATTAAAGGATTTTTTGTCAAATGATGATAGAAGGTCCCTAATTTGCATAGCAGCACAG
GTGACCGTGGAATGATGATCTGTTGAGATTTCTGACAGTGTGATGGCTTTCTCTCAGGTT
TTGCAGTACTGGAAGAGGCAGACTTGCCTGACGGTTTCCGTGTTGCAGGGGCCCCATATG
TAGGCCCCGAGCTCACAATAGACATGGACAGCATGTATAATTAGATAGCTGATCTCTGCT
TTTCCAGAGTATCAGATCAGATAGCTCTCACTGCTTTTCTTAAAGTAGCATTTGCATGGA
CAATACATTGCACCTCGCCATCTTGTATATACGATTATGCATGTGTGTTGTCGGTTTGTC
TTTCTACCATGCTTATCTACCAG

consensusID : consensus_4448#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 522
fasta sequence 
                              [GGCGAACGCGCCCCCGTGCTCGGGCCCAAGGAAGAGTGGTTTAGCCCGAGTGGTCGCCGTCGACGAGATGCGGGAGGCGCCGTGCAAGGCGTCGGTCCTGTTCCCGCGGAGCGGCGGCAACATCCACTCCCTCACCGCCGTCACGCCGTGCGCGCTCCTCGACGTGCTAGCGCCGCCCTACGCCGAGGACCTCGGCCGGCCGTCCACCTACTTCTCCGACATTCCCATCCCTTCTCTCCCTGGTTTTGCAGTACTGGAAGAGGCAGACTTGCCTGACGGTTTCCGTGTTGCAGGGGCCCCATATGTAGGCCCCGAGCTCACAATAGACATGGACAGCATGTATAATTAGATAGCTGATCTCTGCTTTTCCAGAGTATCAGATCAGATAGCTCTCACTGCTTTTCTTAAAGTAGCATTTGCATGGACAATACATTGCACCTCGCCATCTTGTATATACGATTATGCATGTGTGTTGTCGGTTTGTCTTTCTACCATGCTTATTTACCAGTTGGTGTTGGAATG]

[+] EMBL AK107828             [GGCGAACGCGCCCCCGTGCTCGGGCCCAAGGAAGAGTGGTTTAGCCCGAGTGGTCGCCGTCGACGAGATGCGGGAGGCGCCGTGCAAGGCGTCGGTCCTGTTCCCGCGGAGCGGCGGCAACATCCACTCCCTCACCGCCGTCACGCCGTGCGCGCTCCTCGACGTGCTAGCGCCGCCCTACGCCGAGGACCTCGGCCGGCCGTCCACCTACTTCTCCGACATTCCCATCCCTTCTCTCCCTGGTTTTGCAGTACTGGAAGAGGCAGACTTGCCTGACGGTTTCCGTGTTGCAGGGGCCCCATATGTAGGCCCCGAGCTCACAATAGACATGGACAGCATGTATAATTAGATAGCTGATCTCTGCTTTTCCAGAGTATCAGATCAGATAGCTCTCACTGCTTTTCTTAAAGTAGCATTTGCATGGACAATACATTGCACCTCGCCATCTTGTATATACGATTATGCATGTGTGTTGTCGGTTTGTCTTTCTACCATGCTTATTTACCAGTTGGTGTTGGAATG]




>consensus_4448#1
GGCGAACGCGCCCCCGTGCTCGGGCCCAAGGAAGAGTGGTTTAGCCCGAGTGGTCGCCGT
CGACGAGATGCGGGAGGCGCCGTGCAAGGCGTCGGTCCTGTTCCCGCGGAGCGGCGGCAA
CATCCACTCCCTCACCGCCGTCACGCCGTGCGCGCTCCTCGACGTGCTAGCGCCGCCCTA
CGCCGAGGACCTCGGCCGGCCGTCCACCTACTTCTCCGACATTCCCATCCCTTCTCTCCC
TGGTTTTGCAGTACTGGAAGAGGCAGACTTGCCTGACGGTTTCCGTGTTGCAGGGGCCCC
ATATGTAGGCCCCGAGCTCACAATAGACATGGACAGCATGTATAATTAGATAGCTGATCT
CTGCTTTTCCAGAGTATCAGATCAGATAGCTCTCACTGCTTTTCTTAAAGTAGCATTTGC
ATGGACAATACATTGCACCTCGCCATCTTGTATATACGATTATGCATGTGTGTTGTCGGT
TTGTCTTTCTACCATGCTTATTTACCAGTTGGTGTTGGAATG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4448#0      TAGTGTAGATGTGTGAAAGTTAAAACCAGCCGGGTCACTTCGCTTCCTGTGGCAGCACAG 60
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      CTAGCGCGTGGCCATGGACGACCACCAGAGCAAGGTGCAGCGGCTGTACGACGCGTGCGA 120
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      CGCCGTCTTCTCGTCGGGGAGTAAAGCAGGGTTGCCGACGCTCAAGCAGATCAGGTGGCT 180
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      GCAAGACCTGCTCGATGGCATGGAGGCGGCGGACGTCGGGATCGAAGGCGGCGGCAGCGG 240
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      CGGCGAGAGGTCGTCGTCCTCGGAGGACGACGACGAGAGGAGCCCGCCGGGGCGGCGGTT 300
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      TCTCTCGGCGCGGGCGTTCACCCGGATCACCTACGTGCACATCCACGAGTGCGACGATTT 360
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      CTCGATCGGCGTGTTCTGCTTCCCGGCCGGCGCGACGCTGCCGCTGCACGACCACCCGCA 420
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      AATGGTGGTGCTGAGCAAGCTTCTCTACGGCTCGATGCGGGTCAAGTCGTACGACTGGGC 480
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      GAACGCGCCCCCGTGCTCGGGCCCAAGGAAGAGTAAGCATTTGTCTCAGCTGCATGCGAA 540
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      TGCATGCGCCTGTTTGCCGTCGATTCGCTCGCTGATGATCAATCGACAAAAAAACTCGAT 600
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      CGTTTTCTGATGTCAAGTTGTCAACTGCATCTAACATTTGTTCCTTGTCTCACCTACATA 660
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      TACTAGTTTGAGGTTACCTGGCTATGATCAAGGACAGAAAAAGGTCTCTGATAATTTACA 720
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      AGCAGGATGAGATTAATACCTCCCTACAAAATCCTTGTAAAAGACGGTTTCAGATAGCCA 780
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      AATCCCACCGATGTCTCACCAAACCAGCATTTTTTTTCAGCAATATAAACAGGAGAACCT 840
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      ATCTCTCCCTGTCCACTGCTCTACTCTTGATACAGTTTTTAATGGTTTGGAATTTGCAAA 900
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      AGATAGCTCTCGCCTGAAACTGGAATAACTTTTTGGATACTTGCAGCCTCTGTCGATTAA 960
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      TTTTTGAATTACTACTAGCTTACTTCGGTTGGAAGCCCAAGCCACGTGCTGTTGGAAAAA 1020
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      CAACAGTGTACATAGAATGAAACAACTGCACTACTAGTAGTATCAGAAATTGCCGTTTTT 1080
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      ATACTAAGAAAAAAAAAAGAAAAGTAAGTGACGCCATCCCACTGCTTTCCAATATGGCAA 1140
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      GATATCCAAAAGTCCACCAATCCTCTCAAGAAGAGACAGTAACGAAATTCTCACAGGAAT 1200
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      ATAGTATTTTTCATGCAGGTGGTTTAGCCCGAGTGGTCGCCGTCGACGAGATGCGGGAGG 1260
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      CGCCGTGCAAGGCGTCGGTCCTGTTCCCGCGGAGCGGCGGCAACATCCACTCCCTCACCG 1320
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      CCGTCACGCCGTGCGCGCTCCTCGACGTGCTAGCGCCGCCCTACGCCGAGGACCTCGGCC 1380
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      GGCCGTCCACCTACTTCTCCGACATTCCCATCCCCTCTCTCCCTGGTACGCACACAACAT 1440
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      GCATGCATAGGAATCGCTAACCTTCATTCGATATAAAATACCTTCAAATATTACATATTT 1500
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      TGGATCATTGGGTGTGCTTCACGTTTCATGCTCCTGTCTTTTTTTTTAAGCCCCGATGAT 1560
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      CTCCTCATCTTTTCCAACACTGGCAACATTCCAAACTTTGATAGAGAACTTACGGATTAG 1620
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      AGTCCTAGGTTAGAGAAGTTCGTTAGTTTTAGAGGATAACCTAGGAGGCAACAGTTCGGG 1680
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      TGGGCAGCAAGGCGACCGCGGTATTGCCAAAACTACAGGGTCGGAAGTGGATAGTGGGCC 1740
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      GGTGGGCTGGTGGGGAAATGTAGAACAAAGTTAGGAGGTGGTGGCGGATCCAGTTATGGG 1800
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      GAGCCACGGGAAGATGGCGGCACAGGGGTAGCCGGCTTGAGGACAAGGTGAGGAGAGGAA 1860
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      GCGGGGAAGAGGCTAGCTTAGGGATCTTACCGATGTTGTTGACCACTTCTAGTCAGTTGA 1920
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      CAAGCTTGGGTGGCAGCGGCGATGGTGGTGGTAGTGGCGATAAGGGGAAGTCGGAAGAAA 1980
consensus_4448#1      ------------------------------------------------------------
                                                                                  

consensus_4448#0      GAGAGAGTAAGGGAGGGGTTTGAAGGTTTGGTTGTCTTGTACTCC--CTCTGTCCCATAG 2038
consensus_4448#1      -----------------------------GGCGAACGCGCCCCCGTGCTCGGGCCCAAGG 31
                                                   **    *  *  * *   *** * ****  *

consensus_4448#0      AAAACCTAATAGGCTAGTACATATATCTAGATTCATTGTATTAGAATATGTCAAAT-CTA 2097
consensus_4448#1      AAGA----GTGGTTTAGCCCGAGTGGTCGCCGTCGACGAGATGCGGGAGGCGCCGTGCAA 87
                      ** *     * *  ***  *   *        **   *   *     * *     * * *

consensus_4448#0      GTTTTAGATTTTTTTTTTGACGAAGGGAGTAGTACACAACATAAAGTAATCGGGCGGTCT 2157
consensus_4448#1      GGCGTCGGTCCTGTTCCCGCGGAGCGGCG------GCAACATCCACTCCCTCACCGCCGT 141
                      *   * * *  * **   *  **  ** *       ******  * *       **   *

consensus_4448#0      AAAATATTAAAGGATTTTTTGTCAAATGATGATAGAAGGTCCCTAATTTGCATAGCAGCA 2217
consensus_4448#1      CACGCCGTGCGCGCTCCTCGAC------GTGCTAGCGCCGCCCTA---CGCCGAGGACCT 192
                       *     *    * *  *           ** ***     *****    **  ** * * 

consensus_4448#0      CAGGTGACCGTGGAATGATGATCTGTTGAGATTTCTGACAGTGTGATGGCTT-TCTCTCA 2276
consensus_4448#1      CGGCCGGCCGT-------CCACCTACT----TCTCCGACATTCCCATCCCTTCTCTCCCT 241
                      * *  * ****         * **  *    * ** **** *   **  *** **** * 

consensus_4448#0      GGTTTTGCAGTACTGGAAGAGGCAGACTTGCCTGACGGTTTCCGTGTTGCAGGGGCCCCA 2336
consensus_4448#1      GGTTTTGCAGTACTGGAAGAGGCAGACTTGCCTGACGGTTTCCGTGTTGCAGGGGCCCCA 301
                      ************************************************************

consensus_4448#0      TATGTAGGCCCCGAGCTCACAATAGACATGGACAGCATGTATAATTAGATAGCTGATCTC 2396
consensus_4448#1      TATGTAGGCCCCGAGCTCACAATAGACATGGACAGCATGTATAATTAGATAGCTGATCTC 361
                      ************************************************************

consensus_4448#0      TGCTTTTCCAGAGTATCAGATCAGATAGCTCTCACTGCTTTTCTTAAAGTAGCATTTGCA 2456
consensus_4448#1      TGCTTTTCCAGAGTATCAGATCAGATAGCTCTCACTGCTTTTCTTAAAGTAGCATTTGCA 421
                      ************************************************************

consensus_4448#0      TGGACAATACATTGCACCTCGCCATCTTGTATATACGATTATGCATGTGTGTTGTCGGTT 2516
consensus_4448#1      TGGACAATACATTGCACCTCGCCATCTTGTATATACGATTATGCATGTGTGTTGTCGGTT 481
                      ************************************************************

consensus_4448#0      TGTCTTTCTACCATGCTTATCTACCAG-------------- 2543
consensus_4448#1      TGTCTTTCTACCATGCTTATTTACCAGTTGGTGTTGGAATG 522
                      ******************** ******


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)