These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4451#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2933 fasta sequence [CGAACACCCGTTCCCCTCGCGCCGCCTTCCTACCTCGCCGCCGGCGACGCCAACGACTACCCGCGCCGCCGCTACGTCTCCTACTCCTCCTCCTCCTCCTCGACGGAGCAGCGCGGGGAGGCCGACCAATACCCAAAACCTAGCAGCAGCAGCAGCGAGAGAGACAGCTTTTTCCCCCTTCTCACTCCCCACCCATATATGAACACGCGCGGCGCCGCAGCGAGAACCTAAAACCCTAAACCCCCTCCTGAATAAAAGCAAGCATGGCGGCGCCCCTCCCCGCAAGCCCTAGCAACGCCCATGGCGCGGCATCCTAGG--CCCCACCCCGTCACCGCCGCGCGCGAGCTCCGACACCGACGCCGCCTTCGACCCCGTCGTGGAGTGGCTCCTCGACCTCGACCAGGCGCCCATGGCGGACGAGGTGGCCAAGGGCCTCGGTATCGCCGAGGAGCCCGCGAGCTTCGATGCTGGTAAGGTTTCGGGTGGTTCGGTGTCCGAGAGCCGCGGGGTCGAGGAGAAGGGGAACGCCTTGCCAGAGCAATCGGGCGCCTCTTTTGACGGCGAATTGGATGTCGAGATGGAGCCTAAGACGGGGAGCGGAGGATTGGTTCCGCAACTTGTGCAGGATCAGCATCCGGCTTCGGATATTGGTGATTTGGCTGTAAGAGAGGATGGTTCAGAGATAATGGTGGATGTTGAGAGGAGTACTGTACCTGTTGATGCTGACATGAACAATGTGTCCTTGGCCTTGGTGAAAGAGGAAGCGGAAGGGGGAGGAGATAGGGAGGACAAGAGCGACGAGGAAGAGTCCGAGAGTAGCAAGGAGGAGTCGTCTGAGGCTTCGTCGAGCAGTGATGAGGAGGAAGATAAGAGGGAGTCAAGCGAAGCCTCTTCGAGCAGTGACGAGGAAGAGCAGATGGCCAAGAAAACTGGCGGTGCTGGTGACACGGATTCCCTCTTTGAAGAGGGTGAATTGATGCTTGCAAGTGATGACGATGATGAGGAAGCACCAAAGGGTCCTATCAAATCCAAACATGAAGTAGAGGTCCTTCCTCCAGTGCCAAAGATTGATGTACAGCTGGAACCACATCATCAGACCCTACCAGTAGGAACAATTTCAGCTATCATGGGTGAGAGAGTGATTGTTGAAGGGTCAGTGCAACACAATCCCCTGAATGAGGGTTCGATACTCTGGATAACAGAAAGCAGGATCCCACTTGGTATTGTTGATGAATTGTTTGGACC-TGTCAAGAACCCATA-CTATCTTGTACGGTACAACTCTGCAGAAGAGGTGCCTGCTGATATCAGTGCAGGAACTGCTGTCTCTTTTGTTGCAGAGTTTGCAGACCACATCCTAAATATGAAGGAACTGTATGCCAAAGGCTATGATGGATCTGGAGAAAATGACGAGGACCAGACAGACCCTGAATTCTCTGATGATGAGAAAGAGGCTGAGTACAAAAGATCATTACGGCTGGCAAAAAGGCAGACTGATAGGCAGCATGAGGGTAAGAAAACTTCAGGTGATAAGAAGAGAGCACAACCTAGGGGCTCTGGATTTCGGAAAGACATGCCACCCAGGAGCCATGATGGACCTGCACCAGGTCGCCAATCGCAACCTCATTTTCATCGCCCTGATAAGGCTCCTGTAGTTGATGCAATCCGCCCATTGGGTTCTCAAGATGGTCCTATGAGTGCACCAACAAAGCTGCCACCAGGCCCAGTTCATCCTGTTATGCCTGCAGCTAATCAGCTTACAAATCAGATGGGTGGTCGCTTCATGAATCCGTCTCAGCAGTTCTTACCACAGCAGCCTAACGTTGTCTGGCCAGGTGGTCTAACACCTACACCACATCCAAATATGGGGATTGAAGGAGCTGCTTTTGCAGCTAATATCATGCAGAACCTTCTCATTGGAGCCAATCAATACCAGCAACAGTTTCAGAACCATAACTTTGGTGGCTTCCTGAACCAAATGCCTGTACCTCCACCTCAGTTTATGTCGCAAGGTGGAATGCCTTCTAATCCAATGGCATTTGGTGGACCAACGATGGCACAGATGAATCCTCCATTTGGTCCACCTCAATTGCCTATGGATCAAGGTAATTTTGGGCAGGCTCCACACATGGCTGGGCATACAGTGCAACAAGGGCCTCCTGCAGGATTTCCCAATGGCCAAGGATTTGGGCAGTCAGCATCGCCGCAGGGAGATGGAGAGCAGCCACCTATGCAATTCAGTTCTGGGCAGTTTAATCAAGGGAACTCATCCTTCCATGGCAGAAGGCAGCAACAACGGGGAGGCCGGCACTCTTCTGGGAGAGGCGGTGACCGTCACCGCAGATAAAAGATAGGTAACGCTGGTGGTTTTACACCAGCGAAATTTTGACTCGCTGAGTGAACTCCTCTTGAATGGTTCAGTCTTTGCTTTGATGTATTCGTAAACGGAGACATGATCAGTTGCATGTAATATTCAATTTGTTTCGTTTACGGTGAACTTCACTTTGGACACCCTTGTGTGTTTGCCTATGTTTCACAATATACCCCGGTTTAGTGAAGCCTTCAAATTAATGTATGACCAGACTTTGCAAATTGGACTGGGTTTGCTGTGTCACTTTGTTGGTTTCCATCGTGGCCTGTTGGGCGCATCCACGCGAGTAATTTCTGTGCGCGCTGAAGTGCCCGGGTGAACTAGCTTCATTCACTTACAGAGCACTGAAGTTGTAGTATGTGATGTCCATGTCCTCCATACAGTACATCCGGTTCCAATGTTGTTTGTCAAACACTGAAACATAACTGGATTTTGTATGAACCATGATTCTGATATATGAGAGTGACTGTCTTGAGTTCCAGATATGAATTTTGTTAAATGATCGATCCTTGATGTACATATTACTGAACTAGTAAGTCCTGAGGTTCAAAGAAGAAATAACTTG] [+] EMBL AK064242 [CGAACACCCGTTCCCCTCGCGCCGCCTTCCTACCTCGCCGCCGGCGACGCCAACGACTACCCGCGCCGCCGCTACGTCTCCTACTCCTCCTCCTCCTCCTCGACGGAGCAGCGCGGGGAGGCCGACCAATACCCAAAACCTAGCAGCAGCAGCAGCGAGAGAGACAGCTTTTTCCCCCTTCTCACTCCCCACCCATATATGAACACGCGCGGCGCCGCAGCGAGAACCTAAAACCCTAAACCCCCTCCTGAATAAAAGCAAGCATGGCGGCGCCCCTCCCCGCAAGCCCTAGCAACGCCCATGGCGCGGCATCCTAGG CCCCACCCCGTCACCGCCGCGCGCGAGCTCCGACACCGACGCCGCCTTCGACCCCGTCGTGGAGTGGCTCCTCGACCTCGACCAGGCGCCCATGGCGGACGAGGTGGCCAAGGGCCTCGGTATCGCCGAGGAGCCCGCGAGCTTCGATGCTGGTAAGGTTTCGGGTGGTTCGGTGTCCGAGAGCCGCGGGGTCGAGGAGAAGGGGAACGCCTTGCCAGAGCAATCGGGCGCCTCTTTTGACGGCGAATTGGATGTCGAGATGGAGCCTAAGACGGGGAGCGGAGGATTGGTTCCGCAACTTGTGCAGGATCAGCATCCGGCTTCGGATATTGGTGATTTGGCTGTAAGAGAGGATGGTTCAGAGATAATGGTGGATGTTGAGAGGAGTACTGTACCTGTTGATGCTGACATGAACAATGTGTCCTTGGCCTTGGTGAAAGAGGAAGCGGAAGGGGGAGGAGATAGGGAGGACAAGAGCGACGAGGAAGAGTCCGAGAGTAGCAAGGAGGAGTCGTCTGAGGCTTCGTCGAGCAGTGATGAGGAGGAAGATAAGAGGGAGTCAAGCGAAGCCTCTTCGAGCAGTGACGAGGAAGAGCAGATGGCCAAGAAAACTGGCGGTGCTGGTGACACGGATTCCCTCTTTGAAGAGGGTGAATTGATGCTTGCAAGTGATGACGATGATGAGGAAGCACCAAAGGGTCCTATCAAATCCAAACATGAAGTAGAGGTCCTTCCTCCAGTGCCAAAGATTGATGTACAGCTGGAACCACATCATCAGACCCTACCAGTAGGAACAATTTCAGCTATCATGGGTGAGAGAGTGATTGTTGAAGGGTCAGTGCAACACAATCCCCTGAATGAGGGTTCGATACTCTGGATAACAGAAAGCAGGATCCCACTTGGTATTGTTGATGAATTGTTTGGACC TGTCAAGAACCCATA CTATCTTGTACGGTACAACTCTGCAGAAGAGGTGCCTGCTGATATCAGTGCAGGAACTGCTGTCTCTTTTGTTGCAGAGTTTGCAGACCACATCCTAAATATGAAGGAACTGTATGCCAAAGGCTATGATGGATCTGGAGAAAATGACGAGGACCAGACAGACCCTGAATTCTCTGATGATGAGAAAGAGGCTGAGTACAAAAGATCATTACGGCTGGCAAAAAGGCAGACTGATAGGCAGCATGAGGGTAAGAAAACTTCAGGTGATAAGAAGAGAGCACAACCTAGGGGCTCTGGATTTCGGAAAGACATGCCACCCAGGAGCCATGATGGACCTGCACCAGGTCGCCAATCGCAACCTCATTTTCATCGCCCTGATAAGGCTCCTGTAGTTGATGCAATCCGCCCATTGGGTTCTCAAGATGGTCCTATGAGTGCACCAACAAAGCTGCCACCAGGCCCAGTTCATCCTGTTATGCCTGCAGCTAATCAGCTTACAAATCAGATGGGTGGTCGCTTCATGAATCCGTCTCAGCAGTTCTTACCACAGCAGCCTAACGTTGTCTGGCCAGGTGGTCTAACACCTACACCACATCCAAATATGGGGATTGAAGGAGCTGCTTTTGCAGCTAATATCATGCAGAACCTTCTCATTGGAGCCAATCAATACCAGCAACAGTTTCAGAACCATAACTTTGGTGGCTTCCTGAACCAAATGCCTGTACCTCCACCTCAGTTTATGTCGCAAGGTGGAATGCCTTCTAATCCAATGGCATTTGGTGGACCAACGATGGCACAGATGAATCCTCCATTTGGTCCACCTCAATTGCCTATGGATCAAGGTAATTTTGGGCAGGCTCCACACATGGCTGGGCATACAGTGCAACAAGGGCCTCCTGCAGGATTTCCCAATGGCCAAGGATTTGGGCAGTCAGCATCGCCGCAGGGAGATGGAGAGCAGCCACCTATGCAATTCAGTTCTGGGCAGTTTAATCAAGGGAACTCATCCTTCCATGGCAGAAGGCAGCAACAACGGGGAGGCCGGCACTCTTCTGGGAGAGGCGGTGACCGTCACCGCAGATAAAAGATAGGTAACGCTGGTGGTTTTACACCAGCGAAATTTTGACTCGCTGAGTGAACTCCTCTTGAATGGTTCAGTCTTTGCTTTGATGTATTCGTAAACGGAGACATGATCAGTTGCATGTAATATTCAATTTGTTTCGTTTACGGTGAACTT ] [+] EMBL AK065486 [ CGCGCCGCCTTCCTACCTCGCCGCCGGCGACGCCAACGACTACCCGCGCCGCCGCTACGTCTCCTACTCCTCCTCCTCCTCCTCGACGGAGCAGCGCGGGGAGGCCGACCAATACCCAAAACCTAGCAGCAGCAGCAGCGAGAGAGACAGCTTTTTCCCCCTTCTCACTCCCCACCCATATATGAACACGCGCGGCGCCGCAGCGAGAACCTAAAACCCTAAACCCCCTCCTGAATAAAAGCAAGCATGGCGGCGCCCCTCCCCGCAAGCCCTAGCAACGCCCATGGCGCGGCATCCTAGGCCCCCCACCCCGTCACCGCCGCGCGCGAGCTCCGACACCGACGCCGCCTTCGACCCCGTCGTGGAGTGGCTCCTCGACCTCGACCAGGCGCCCATGGCGGACGAGGTGGCCAAGGGCCTCGGTATCGCCGAGGAGCCCGCGAGCTTCGATGCTGGTAAGGTTTCGGGTGGTTCGGTGTCCGAGAGCCGCGGGGTCGAGGAGAAGGGGAACGCCTTGCCAGAGCAATCGGGCGCCTCTTTTGACGGCGAATTGGATGTCGAGATGGAGCCTAAGACGGGGAGCGGAGGATTGGTTCCGCAACTTGTGCAGGATCAGCATCCGGCTTCGGATATTGGTGATTTGGCTGTAAGAGAGGATGGTTCAGAGATAATGGTGGATGTTGAGAGGAGTACTGTACCTGTTGATGCTGACATGAACAATGTGTCCTTGGCCTTGGTGAAAGAGGAAGCGGAAGGGGGAGGAGATAGGGAGGACAAGAGCGACGAGGAAGAGTCCGAGAGTAGCAAGGAGGAGTCGTCTGAGGCTTCGTCGAGCAGTGATGAGGAGGAAGATAAGAGGGAGTCAAGCGAAGCCTCTTCGAGCAGTGACGAGGAAGAGCAGATGGCCAAGAAAACTGGCGGTGCTGGTGACACGGATTCCCTCTTTGAAGAGGGTGAATTGATGCTTGCAAGTGATGACGATGATGAGGAAGCACCAAAGGGTCCTATCAAATCCAAACATGAAGTAGAGGTCCTTCCTCCAGTGCCAAAGATTGATGTACAGCTGGAACCACATCATCAGACCCTACCAGTAGGAACAATTTCAGCTATCATGGGTGAGAGAGTGATTGTTGAAGGGTCAGTGCAACACAATCCCCTGAATGAGGGTTCGATACTCTGGATAACAGAAAGCAGGATCCCACTTGGTATTGTTGATGAATTGTTTGGACC TGTCAAGAACCCATA CTATCTTGTACGGTACAACTCTGCAGAAGAGGTGCCTGCTGATATCAGTGCAGGAACTGCTGTCTCTTTTGTTGCAGAGTTTGCAGACCACATCCTAAATATGAAGGAACTGTATGCCAAAGGCTATGATGGATCTGGAGAAAATGACGAGGACCAGACAGACCCTGAATTCTCTGATGATGAGAAAGAGGCTGAGTACAAAAGATCATTACGGCTGGCAAAAAGGCAGACTGATAGGCAGCATGAGGGTAAGAAAACTTCAGGTGATAAGAAGAGAGCACAACCTAGGGGCTCTGGATTTCGGAAAGACATGCCACCCAGGAGCCATGATGGACCTGCACCAGGTCGCCAATCGCAACCTCATTTTCATCGCCCTGATAAGGCTCCTGTAGTTGATGCAATCCGCCCATTGGGTTCTCAAGATGGTCCTATGAGTGCACCAACAAAGCTGCCACCAGGCCCAGTTCATCCTGTTATGCCTGCAGCTAATCAGCTTACAAATCAGATGGGTGGTCGCTTCATGAATCCGTCTCAGCAGTTCTTACCACAGCAGCCTAACGTTGTCTGGCCAGGTGGTCTAACACCTACACCACATCCAAATATGGGGATTGAAGGAGCTGCTTTTGCAGCTAATATCATGCAGAACCTTCTCATTGGAGCCAATCAATACCAGCAACAGTTTCAGAACCATAACTTTGGTGGCTTCCTGAACCAAATGCCTGTACCTCCACCTCAGTTTATGTCGCAAGGTGGAATGCCTTCTAATCCAATGGCATTTGGTGGACCAACGATGGCACAGATGAATCCTCCATTTGGTCCACCTCAATTGCCTATGGATCAAGGTAATTTTGGGCAGGCTCCACACATGGCTGGGCATACAGTGCAACAAGGGCCTCCTGCAGGATTTCCCAATGGCCAAGGATTTGGGCAGTCAGCATCGCCGCAGGGAGATGGAGAGCAGCCACCTATGCAATTCAGTTCTGGGCAGTTTAATCAAGGGAACTCATCCTTCCATGGCAGAAGGCAGCAACAACGGGGAGGCCGGCACTCTTCTGGGAGAGGCGGTGGCCGTCACCGCAGATAAAAGATAGGTAACGCTGGTGGTTTTACACCAGCGAAATTTTGACTCGCTGAGTGAACTCCTCTTGAATGGTTCAGTCTTTGCTTTGATGTATTCGTAAACGGAGACATGATCAGTTGCATGTAATATTCAATTTGTTTCGTTTACGGTGAACTTCACTTTGGACACCCTTGTGTGTTTGCCTATGTTTCACAATATACCCCGGTTTAGTGAAGCCTTCAAATTAATGTATGACCAGACTTTGCAAATTGGACTGGGTTTGCTGTGTCACTTTGTTGGTTTCCATCGTGGCCTGTTGGGCGCATCCACGCGAGTAATTTCTGTGCGCGCTGAAGTGCCCGGGTGAACTAGCTTCATTCACTTACAGAGCACTGAAGTTGTAGTATGTGATGTCCATGTCCTCCATACAGTACATCCGGTTCCAATGTTGTTTGTCAAACACTGAAACATAACTGGATTTTGTATGAACCATGATTCTGATATATGAGAGTGACTGTCTTGAGTTCCAGATATGAATTTTGTTAAATGATCGATCCTTGATGTACATATTACTGAACTAGTAAGTCCTGAGGTTCAAAGAAGAAATAACTTG] [+] EMBL CA753291 [ TGACATGAACAATGTGTCCTTGGCCTTGGTGAAAGAGGAAGCGGAAGGGGGAGGAGATAGGGAGGACAAGAGCGACGAGGAAGAGTCCGAGAGTAGCAAGGAGGAGTCGTCTGAGGCTTCGTCGAGCAGTGATGAGGAGGAAGATAAGAGGGAGTCAAGCGAAGCCTCTTCGAGCAGTGACGAGGAAGAGCAGATGGCCAAGAAAACTGGCGGTGCTGGTGACACGGATTCCCTCTTTGAAGAGGGTGAATTGATGCTTGCAAGTGATGACGATGATGAGGAAGCACCAAAGGGTCCTATCAAATCCAAACATGAAGTAGAGGTCCTTCCTCCAGTGCCAAAGATTGATGTACAGCTGGAACCACATCATCAGACCCTACCATTAGGAACAATTTCAGCTATCCTGGGTGAGAGAGTGATTGTCGAAGGGTCAGTGCAACACAATCCCCTGAATGAGGGTNCGATACTCTGGATAACACAAAGCAGGATCCC CTGGGTATTGGTGATGAATTGTTTGGACCTTGT AAG ACCCATACCCATCTNGTTCCGTACAACTCTGCAGAAAATGTGCCTGCCGATATCANTGCAGGAACGGCNNGCNCTTTTGTNCCAAAATTCGCAAACCACCTCCTAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||