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Oryza sativa
cluster # 4456 cluster # 4456       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4456#0 length = 1118 sequences # 3  

consensusID : consensus_4456#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1118
fasta sequence
                              [TTAGCGAGCACTGCGCACTGAGCACCTCGACACGGCGCGCGCGCGGCCATGGTGAAGAACACGAGCAACAAGTGCATTGCTGCTGCCGGCGCGACGGCGGCGGCCGGCTTAGGCGGTGGCGCGGCGTCGTGCAGCGGCGGCGGAGGTGATGGGAAGGTGACGACGGCGGCGGCAGCGGCGTTGGCGGTGAGGCCGTACAAGGGGGTGAGGATGCGGAGCTGGGGGTCGTGGGTGTCGGAGATCAGGGCGCCGCACCAGAAGCGGCGGATCTGGCTGGGCTCCTACGCCACGCCGGAGGCCGCGGCGCGCGCCTACGACGCCGCGCTGCTCTGCCTCAAGGGCTCCGACGCCGTCCTCAACTTCCCCTCCTCCGCCTCGTCTCGCCGCCGCCTCGACATCCACCGGGGGGGCACGGACTCGGCGGCGGGCGACATG-TCGCCGAGGTCCATCCAGCGCGTCGCGGCCGCCGCGGCGGCGGCATTCGACGCCGCCGCCGCCGCCGTCGTCGTCGACGAAAGCTGCTCGTGCAGCGCCGAGGCGATGTCGTCGACGCCGACGTCGGGAGCGACCTCGCTGTCCACGCTGGGAAGCTCCGGCGGCGGTGACGTGCTGGACCACGCGACGACGCCGTCGTCGTCGTCGTCTGCCGCGGCCAACGTTTGCTCGCCGCCGCTGGAGGGGGACCATGAGCTGTGGACGGAGCTGGACGCGTTCGCGTCGCCGAAGTTCATGGATCTAATGGCCGCCGGCGGCACGGCGTTCTCGTCGCCGTGGGAGGAGCCCGAGGAGGACGGCGAGCTGATGAGGCTGTGGAGCTTCTGCTAGCTTAGCTAGGAGCCTAGGAAATCGATCGTGAATCCATTCGCCCATGCAACACAATACTACCATTGATCCAATCAATTTCTCCTCTCTTTGAGCATCGAAAGCTAGGTTAATTAGGCCTTGGTCCATGGCTTCAGTTCTTCCATAGATTCTTCTTCTTTTCTTTGATAATATCTTGATTAATTAATATGGTTGTAATTTATATAAGTATTTTACGGTGTTACACTGTACGGGTTGTTGAATGAGACTGTGAGTGCATTGGATACTGGTTGGATTTGTTCCATTTCTGTTCTAAT]

[+] EMBL AK068934             [TTAGCGAGCACTGCGCACTGAGCACCTCGACACGGCGCGCGCGCGGCCATGGTGAAGAACACGAGCAACAAGTGCATTGCTGCTGCCGGCGCGACGGCGGCGGCCGGCTTAGGCGGTGGCGCGGCGTCGTGCAGCGGCGGCGGAGGTGATGGGAAGGTGACGACGGCGGCGGCAGCGGCGTTGGCGGTGAGGCCGTACAAGGGGGTGAGGATGCGGAGCTGGGGGTCGTGGGTGTCGGAGATCAGGGCGCCGCACCAGAAGCGGCGGATCTGGCTGGGCTCCTACGCCACGCCGGAGGCAGCGGCGCGCGCCTACGACGCCGCGCTGCTCTGCCTCAAGGGCTCCGACGCCGTCCTCAACTTCCCCTCCTCCGCCTCGTCTCGCCGCCGCCTCGACATCCACCGGGGGGGCACGGACTCGGCGGCGGGCGACATG TCGCCGAGGTCCATCCAGCGCGTCGCGGCCGCCGCGGCGGCGGCATTCGACGCCGCCGCCGCCGCCGTCGTCGTCGACGAAAGCTGCTCGTGCAGCGCCGAGGCGATGTCGTCGACGCCGACGTCGGGAGCGACCTCGCTGTCCACGCTGGGAAGCTCCGGCGGCGGTGACGTGCTGGACCACGCGACGACGCCGTCGTCGTCGTCGTCTGCCGCGGCCAACGTTTGCTCGCCGCCGCTGGAGGGGGACCATGAGCTGTGGACGGAGCTGGACGCGTTCGCGTCGCCGAAGTTCATGGATCTAATGGCCGCCGGCGGCACGGCGTTCTCGTCGCCGTGGGAGGAGCCCGAGGAGGACGGCGAGCTGATGAGGCTGTGGAGCTTCTGCTAGCTTAGCTAGGAGCCTAGGAAATCGATCGTGAATCCATTCGCCCATGCAACACAATACTACCATTGATCCAATCAATTTCTCCTCTCTTTGAGCATCGAAAGCTAGGTTAATTAGGCCTTGGTCCATGGCTTCAGTTCTTCCATAGATTCTTCTTCTTTTCTTTGATAATATCTTGATTAATTAATATGGTTGTAATTTATATAAGTATTTTACGGTGTTACACTGTACGGGTTGTTGAATGAGACTGTGAGTGCATTGGATACTGGTTGGATTTGTTCCATTTCTGTTCTAAT]
[+] EMBL AU163476             [                ACTGAGCACCTCGACACGGCNCGCGCGCGGCCATGGTGAAGAACACGAGCNACAAGTGCATTGCTGCTGCCGGCGCGACGGCGGCGGCCGGCTTAGGCGGTGGCGCGGCGTCGTGCAGCGGCGGCGGAGGTGATGGGAAGGTGACGACGGCGGCGGCAGCGGNGTTGGCGGTGAGGCCGTACAAGGGGGTGAGGATGCGGAGCTGGGGGTCGTGGGTGTCGGAGATCAGGGCGCCGCACCAGAAGCGGCGGATCTGGCTGGGCTCCTACGCCACGCCGGAGGCCGCGGCGCGCGCCTACGACGNCGCGCTGCTCTGCCTCAAGGGCTCCGACGCCGTCCTCAACTTCCCCTCCTCCGCCTCGTCTCGCCGCCGCCTCGACATCCACCGGGGGGGCACGGACTCGGCGGC GGCGACATG TCGCCGAGGTCCATCCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU078365             [                ACTGAGCACCTCGACACGGCGCGCGCGCGGCCATGGTGAAGAACACGAGCAACAAGTGCATTGCTGCTGCCGGCGCGACGGCGGCGGCCGGCTTAGGCGGTGGCGCGGCGTCGTGCAGCGGCGGCGGAGGTGATGGGAAGGTGACGACGGCGGCGGCAGCGGCGTTGGCGGTGAGGCCGTACAAGGGGGTGAGGATGCGGA CTGGGGGTCGTGGGTNTCGGAGATCAGGGCGCCGCACCAGAAGCGGCGGATCTGGCTGGGCTCCTACGCCACGCCGGA GCCGCGGCGCGCGCCTACGACGCCGCGCTGCTCTGCCTCAAGGGCTCCGACGCCGTCCTCAACTTCCCCTCCTCCGCCTCGTCTCNCCGCCGCCTCGACATCCACCGGGGGGGCACGGACTCNGCGGCGGGCGACATGATCGCCGAGGTCCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]


>consensus_4456#0 TTAGCGAGCACTGCGCACTGAGCACCTCGACACGGCGCGCGCGCGGCCATGGTGAAGAAC ACGAGCAACAAGTGCATTGCTGCTGCCGGCGCGACGGCGGCGGCCGGCTTAGGCGGTGGC GCGGCGTCGTGCAGCGGCGGCGGAGGTGATGGGAAGGTGACGACGGCGGCGGCAGCGGCG TTGGCGGTGAGGCCGTACAAGGGGGTGAGGATGCGGAGCTGGGGGTCGTGGGTGTCGGAG ATCAGGGCGCCGCACCAGAAGCGGCGGATCTGGCTGGGCTCCTACGCCACGCCGGAGGCC GCGGCGCGCGCCTACGACGCCGCGCTGCTCTGCCTCAAGGGCTCCGACGCCGTCCTCAAC TTCCCCTCCTCCGCCTCGTCTCGCCGCCGCCTCGACATCCACCGGGGGGGCACGGACTCG GCGGCGGGCGACATGTCGCCGAGGTCCATCCAGCGCGTCGCGGCCGCCGCGGCGGCGGCA TTCGACGCCGCCGCCGCCGCCGTCGTCGTCGACGAAAGCTGCTCGTGCAGCGCCGAGGCG ATGTCGTCGACGCCGACGTCGGGAGCGACCTCGCTGTCCACGCTGGGAAGCTCCGGCGGC GGTGACGTGCTGGACCACGCGACGACGCCGTCGTCGTCGTCGTCTGCCGCGGCCAACGTT TGCTCGCCGCCGCTGGAGGGGGACCATGAGCTGTGGACGGAGCTGGACGCGTTCGCGTCG CCGAAGTTCATGGATCTAATGGCCGCCGGCGGCACGGCGTTCTCGTCGCCGTGGGAGGAG CCCGAGGAGGACGGCGAGCTGATGAGGCTGTGGAGCTTCTGCTAGCTTAGCTAGGAGCCT AGGAAATCGATCGTGAATCCATTCGCCCATGCAACACAATACTACCATTGATCCAATCAA TTTCTCCTCTCTTTGAGCATCGAAAGCTAGGTTAATTAGGCCTTGGTCCATGGCTTCAGT TCTTCCATAGATTCTTCTTCTTTTCTTTGATAATATCTTGATTAATTAATATGGTTGTAA TTTATATAAGTATTTTACGGTGTTACACTGTACGGGTTGTTGAATGAGACTGTGAGTGCA TTGGATACTGGTTGGATTTGTTCCATTTCTGTTCTAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)