cluster # 4468

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Oryza sativa
cluster # 4468 cluster # 4468 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4468#0 length = 916 sequences # 3

consensusID : consensus_4468#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 916
fasta sequence

                              [ACTAGCTAGCTATAGCTCTAGTTCTACTCTAATTGCGCAGTCGATCGAACGTACACTGCCAATCAAATCAACTGCGAGCTTGCAATGGAGAGAGGAGCGAGCTTTGCAGTGGTGATGGCGGCCATGGCGGTGGTTCTGGCCACCACATCGACGGCGCAGGCCCAGACCACGGCGACCGACATCGTCAACATCCACAACGCCGCCCGGAGCGCCGTCGGCGTCCCGGCGCTGTCGTGGGACGACAACCTGGCGGCGTACGCGCAGGGCTACGCGAACCAGCGCGCCGGCGACTGCGCGCTGCGGCACTCCGATCGCAACAACTATCAGTACGGCGAGAACCTGTCGTGGAACCCCTCCGTGCAGGCGTGGACGGCGGCGAGCTCCGTCGACCAGTGGGTGGCGGAGAAGGGCTCCTACGACTACGCCAGCAACAGCTGCGTCGGCGGCGCCATGTGCGGCCACTACACGCAGGTCGTGTGGCGCGACACCACCGCCGTCGGATGCGCCGCCGTCGCCTGCAACGCCAACCGAGGCGTCTTCTTCATCTGCACCTACTTCCCCGCCGGCAACGTCCAAAACCAGAGGCCGTACTAGCTACCGTATACGTATACGTATACGT-ACGTACGTAACGTATATGCTATGG-A-ATATATTTTGCTACTACTCTAGTATATATTGTACGTA--TAAATCTTTCTGCTCTCAGTAGATATATATGCGCATATATGTACGAAC--TACTATGTATGTTCGTATGTATATATGTACGCACATCGATCTGCATGCGTATGCATGATCAGTGTGTTGGATGCAATAAGTACGTCATGATGCAGACGTATTGAGTATCTACAAATACAGATATATATGTATCCGGTGTGTATTTTTATTACAAATTACTCCCTCCGTATTTTAATGTATGACGCCA]

[+] EMBL AK060005             [ACTAGCTAGCTATAGCTCTAGTTCTACTCTAATTGCGCAGTCGATCGAACGTACACTGCCAATCAAATCAACTGCGAGCTTGCAATGGAGAGAGGAGCGAGCTTTGCAGTGGTGATGGCGGCCATGGCGGTGGTTCTGGCCACCACATCGACGGCGCAGGCCCAGACCACGGCGACCGACATCGTCAACATCCACAACGCCGCCCGGAGCGCCGTCGGCGTCCCGGCGCTGTCGTGGGACGACAACCTGGCGGCGTACGCGCAGGGCTACGCGAACCAGCGCGCCGGCGACTGCGCGCTGCGGCACTCCGATCGCAACAACTATCAGTACGGCGAGAACCTGTCGTGGAACCCCTCCGTGCAGGCGTGGACGGCGGCGAGCTCCGTCGACCAGTGGGTGGCGGAGAAGGGCTCCTACGACTACGCCAGCAACAGCTGCGTCGGCGGCGCCATGTGCGGCCACTACACGCAGGTCGTGTGGCGCGACACCACCGCCGTCGGATGCGCCGCCGTCGCCTGCAACGCCAACCGAGGCGTCTTCTTCATCTGCACCTACTTCCCCGCCGGCAACGTCCAAAACCAGAGGCCGTACTAGCTACCGTATACGTATACGTATACGT ACGTACGTAACGTATATGCTATGG A ATATATTTTGCTACTACTCTAGTATATATTGTACGTA  TAAATCTTTCTGCTCTCAGTAGATATATATGCGCATATATGTACGAAC  TACTATGTATGTTCGTATGTATATATGTACGCACATCGATCTGCATGCGTATGCATGATCAGTGTGTTGGATGCAATAAGTACGTCATGATGCAGACGTATTGAGTATCTACAAATACAGATATATATGTATCCGGTGTGTATTTTTATTACAAATTACTCCCTCCGTATTTTAATGTATGACGCCA]
[+] EMBL AK104140             [ACTAGCTAGCTATAGCTCTAGTTCTACTCTAATTGCGCAGTCGATCGAACGTACACTGCCAATCAAATCAACTGCGAGCTTGCAATGGAGAGAGGAGCGAGCTTTGCAGTGGTGATGGCGGCCATGGCGGTGGTTCTGGCCACCACATCGACGGCGCAGGCCCAGACCACGGCGACCGACATCGTCAACATCCACAACGCCGCCCGGAGCGCCGTCGGCGTCCCGGCGCTGTCGTGGGACGACAACCTGGCGGCGTACGCGCAGGGCTACGCGAACCAGCGCGCCGGCGACTGCGCGCTGCGGCACTCCGATCGCAACAACTATCAGTACGGCGAGAACCTGTCGTGGAACCCCTCCGTGCAGGCGTGGACGGCGGCGAGCTCCGTCGACCAGTGGGTGGCGGAGAAGGGCTCCTACGACTACGCCAGCAACAGCTGCGTCGGCGGCGCCATGTGCGGCCACTACACGCAGGTCGTGTGGCGCGACACCACCGCCGTCGGATGCGCCGCCGTCGCCTGCAACGCCAACCGAGGCGTCTTCTTCATCTGCACCTACTTCCCCGCCGGCAACGTCCAAAACCAGAGGCCGTACTAGCTACCGTATACGTATACGTATACGT ACGTACGTAACGTATATGCTATGG A ATATATTTTGCTACTACTCTAGTATATATTGTACGTA  TAAATCTTTCTGCTCTCAGTAGATATATATGCGCATATATGTACGAAC  TACTATGTATGTTCGTATGTATATATGTACGCACATCGATCTGCATGCGTATGCATGATCAGTGTGTTGGATGCAATAAGTACGTCATGATGCAGACGTATTGAGTATCTACAAATACAGATATATATGTATCCGGTGTGTATTTTTATTACAAATTA                             ]
[+] EMBL AK063248             [ACTAGCTAGCTATAGCTCTAGTTCTACTCTAATTGCGCAGTCGATCGAACGTACACTGCCAATCAAATCAACTGCGAGCTTGCAATGGAGAGAGGAGCGAGCTTTGCAGTGGTGATGGCGGCCATGGCGGTGGTTCTGGCCACCACATCGACGGCGCAGGCCCAGACCACGGCGACCGACATCGTCAACATCCACAACGCCGCCCGGAGCGCCGTCGGCGTCCCGGCGCTGTCGTGGGACGACAACCTGGCGGCGTACGCGCAGGGCTACGCGAACCAGCGCGCCGGCGACTGCGCGCTGCGGCACTCCGATCGCAACAACTATCAGTACGGCGAGAACCTGTCGTGGAACCCCTCCGTGCAGGCGTGGACGGCGGCGAGCTCCGTCGACCAGTGGGTGGCGGAGAAGGGCTCCTACGACTACGCCAGCAACAGCTGCGTCGGCGGCGCCATGTGCGGCCACTACACGCAGGTCGTGTGGCGCGACACCACCGCCGTCGGATGCGCCGCCGTCGCCTGCAACGCCAACCGAGGCGTCTTCTTCATCTGCACCTACTTCCCCGCCGGCAACGTCCAAAACCAGAGGCCGTACTAGCTACCGTATACGTATACG  TACGTAACGTA  TTACGTATATGCTATGGTATATATATTTTGCTACTATACT  TATATATTGTTTGTACGTAA     TC GATCT A TAGATATATATGCGCATATATGTGCGAACTATATTATATATGTATGTTCGTATGTATGTATG  CAT  ATCTGCATGCGTAT  AT AAGTGTGTGTCGGATGGAATAAGTACATCATGATGCAAGCGTATTGAGTATAT C TATACAGATAc                                                               ]




>consensus_4468#0
ACTAGCTAGCTATAGCTCTAGTTCTACTCTAATTGCGCAGTCGATCGAACGTACACTGCC
AATCAAATCAACTGCGAGCTTGCAATGGAGAGAGGAGCGAGCTTTGCAGTGGTGATGGCG
GCCATGGCGGTGGTTCTGGCCACCACATCGACGGCGCAGGCCCAGACCACGGCGACCGAC
ATCGTCAACATCCACAACGCCGCCCGGAGCGCCGTCGGCGTCCCGGCGCTGTCGTGGGAC
GACAACCTGGCGGCGTACGCGCAGGGCTACGCGAACCAGCGCGCCGGCGACTGCGCGCTG
CGGCACTCCGATCGCAACAACTATCAGTACGGCGAGAACCTGTCGTGGAACCCCTCCGTG
CAGGCGTGGACGGCGGCGAGCTCCGTCGACCAGTGGGTGGCGGAGAAGGGCTCCTACGAC
TACGCCAGCAACAGCTGCGTCGGCGGCGCCATGTGCGGCCACTACACGCAGGTCGTGTGG
CGCGACACCACCGCCGTCGGATGCGCCGCCGTCGCCTGCAACGCCAACCGAGGCGTCTTC
TTCATCTGCACCTACTTCCCCGCCGGCAACGTCCAAAACCAGAGGCCGTACTAGCTACCG
TATACGTATACGTATACGTACGTACGTAACGTATATGCTATGGAATATATTTTGCTACTA
CTCTAGTATATATTGTACGTATAAATCTTTCTGCTCTCAGTAGATATATATGCGCATATA
TGTACGAACTACTATGTATGTTCGTATGTATATATGTACGCACATCGATCTGCATGCGTA
TGCATGATCAGTGTGTTGGATGCAATAAGTACGTCATGATGCAGACGTATTGAGTATCTA
CAAATACAGATATATATGTATCCGGTGTGTATTTTTATTACAAATTACTCCCTCCGTATT
TTAATGTATGACGCCA

clustalw multiple alignements is not computed in this case