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Oryza sativa
cluster # 4480 cluster # 4480       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4480#0 length = 957 sequences # 3  
consensusID : consensus_4480#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 957
fasta sequence 
                              [CCCCCTTCCGCTCGCTCGCGCCGCTCCCTACCGGCCACCACCGCGCGCGGGACAAGCAACCTAGCTGCTCCGGCTGCCAAGCCATCGCCATGGCTCCGTGCCCCGCCGCGACCACAACTCGCATTGGGGCGCCGCCGTTCGCCGCGACGACGGCTCGCCGACCCGCCCGGGGCGCGACGACGACGACGAAGGCGCGGGCGTCCGGGCTGCGGCAGGTGGAGGGCCCCGTGTCGGAGAGGGCGTACTCGTCCTCCTCGCCCGCTCCCACCCACAAGGTCACCGTCCACGACCGCCAGAGAGGTGTCGTCCACGAGTTCGTCGTCCCACAGGACCAGTACATTCTGCACACCGCGGAGGCGCAGGACATCACGCTGCCCTTCGCGTGCCGCCATGGTTGCTGTACTAGCTGTGCGGTTCGGATAAAGTCAGGACAAATAAGACAACCTGAAGCACTTGGAATATCTGCTGAACTAAAAGATAAGGGCTATGCATTGTTGTGTGTTGGTTTTCCAACTTCTGATGTTGAAGTTGAAACACAAGATGAAGATGAGGTCTACTGGCTCCAGTTTGGAAGATATTTCGCACGAGGACCTGTTGAAAGGGATGATTATGCACTGGAGCTTGCAATGGGTGATGAGTGAGCCGTGTCTAAAGAGTGGTGTTTGCAGTCGGGAGCTCATGTTGTCTTAAGGACTTTCTTTGAAAGTGGAGAAAGGGGC-TTTTTCCTCAGCTCACAATTTTCCATCTTCAGTGCTGTTACTCTGTTAGCGATTGTTTGGCATGTAAAAAAGTGTGCTTTCTTGTAAAAATACCATTTTCTAGTTCGCACCTGACAGACGAAGAACACCATGGATTACATGTAAAGTTGTAAACTGAACACCTAATCTTGAGTGCGAATAATGAATAATGATCACCGGAGTTATGAGTTTGGGAATGATATGCTGCCATGAAAACCTT]

[+] EMBL AK059896             [CCCCCTTCCGCTCGCTCGCGCCGCTCCCTACCGGCCACCACCGCGCGCGGGACAAGCAACCTAGCTGCTCCGGCTGCCAAGCCATCGCCATGGCTCCGTGCCCCGCCGCGACCACAACTCGCATTGGGGCGCCGCCGTTCGCCGCGACGACGGCTCGCCGACCCGCCCGGGGCGCGACGACGACGACGAAGGCGCGGGCGTCCGGGCTGCGGCAGGTGGAGGGCCCCGTGTCGGAGAGGGCGTACTCGTCCTCCTCGCCCGCTCCCACCCACAAGGTCACCGTCCACGACCGCCAGAGAGGTGTCGTCCACGAGTTCGTCGTCCCACAGGACCAGTACATTCTGCACACCGCGGAGGCGCAGGACATCACGCTGCCCTTCGCGTGCCGCCATGGTTGCTGTACTAGCTGTGCGGTTCGGATAAAGTCAGGACAAATAAGACAACCTGAAGCACTTGGAATATCTGCTGAACTAAAAGATAAGGGCTATGCATTGTTGTGTGTTGGTTTTCCAACTTCTGATGTTGAAGTTGAAACACAAGATGAAGATGAGGTCTACTGGCTCCAGTTTGGAAGATATTTCGCACGAGGACCTGTTGAAAGGGATGATTATGCACTGGAGCTTGCAATGGGTGATGAGTGAGCCGTGTCTAAAGAGTGGTGTTTGCAGTCGGGAGCTCATGTTGTCTTAAGGACTTTCTTTGAAAGTGGAGAAAGGGGCTTTTTTCCTCAGCTCACAATTTTCCATCTTCAGTGCTGTTACTCTGTTAGCGATTGTTTGGCATGTAAAAAAGTGTGCTTTCTTGTAAAAATACCATTTTCTAGTTCGCACCTGACAGACGAAGAACACCATGGATTACATGTAAAGTTGTAAACTGAACACCTAATCTTGAGTGCGAATAATGAATAATGATCACCGGAGTTATGAGTTTGGGAATGATATGCTGCCATGAAAACCTT]
[+] EMBL AK098989             [ CCCCTTCCGCTCGCTCGCGCCGCTCCCTACCGGCCACCACCGCGCGCGGGACAAGCAACCTAGCTGCTCCGGCTGCCAAGCCATCGCCATGGCTCCGTGCCCCGCCGCGACCACAACTCGCATTGGGGCGCCGCCGTTCGCCGCGACGACGGCTCGCCGACCCGCCCGGGGCGCGACGACGACGACGAAGGCGCGGGCGTCCGGGCTGCGGCAGGTGGAGGGCCCCGTGTCGGAGAGGGCGTACTCGTCCTCCTCGCCCGCTCCCACCCACAAGGTCACCGTCCACGACCGCCAGAGAGGTGTCGTCCACGAGTTCGTCGTCCCACAGGACCAGTACATTCTGCACACCGCGGAGGCGCAGGACATCACGCTGCCCTTCGCGTGCCGCCATGGTTGCTGTACTAGCTGTGCGGTTCGGATAAAGTCAGGACAAATAAGACAACCTGAAGCACTTGGAATATCTGCTGAACTAAAAGATAAGGGCTATGCATTGTTGTGTGTTGGTTTTCCAACTTCTGATGTTGAAGTTGAAACACAAGATGAAGATGAGGTCTACTGGCTCCAGTTTGGAAGATATTTCGCACGAGGACCTGTTGAAAGGGATGATTATGCACTGGAGCTTGCAATGGGTGATGAGTGAGCCGTGTCTAAAGGGTGGTGTTTGCAGTCGGGAGCTCATGTTGTCTTAAGGACTTTCTTTGAAAGTGGAGAAAGGGGC TTTTTCCTCAGCTCACAATTTTCCATCTTCAGTGCTGTTACTCTGTTAGCGATTGTTTGGCATGTAAAAAAGTGTGCTTTCTTGTAAAAATACCATTTTCTAGTTCGCACCTGACAGACGAAGAACACCATGGATTACATGTAAAGTTGTAAACTGAACACCTAATCTTGAGTGCGAATAATGAATAATGATCACCGGAGTTA                                   ]
[+] EMBL AK099303             [   CCTTCCGCTCGCTCGCGCCGCTCCCTACCGGCCACCACCGCGCGCGGGACAAGCAACCTAGCTGCTCCGGCTGCCAAGCCATCGCCATGGCTCCGTGCCCCGCCGCGACCACAACTCGCATTGGGGCGCCGCCGTTCGCCGCGACGACGGCTCGCCGACCCGCCCGGGGCGCGACGACGACGACGAAGGCGCGGGCGTCCGGGCTGCGGCAGGTGGAGGGCCCCGTGTCGGAGAGGGCGTACTCGTCCTCCTCGCCCGCTCCCACCCACAAGGTCACCGTCCACGACCGCCAGAGAGGTGTCGTCCACGAGTTCGTCGTCCCACAGGACCAGTACATTCTGCACACCGCGGAGGCGCAGGACATCACGCTGCCCTTCGCGTGCCGCCATGGTTGCTGTACTAGCTGTGCGGTTCGGATAAAGTCAGGACAAATAAGACAACCTGAAGCACTTGGAATATCTGCTGAACTAAAAGATAAGGGCTATGCATTGTTGTGTGTTGGTTTTCCAACTTCTGATGTTGAAGTTGAAACACAAGATGAAGATGAGGTCTACTGGCTCCAGTTTGGAAGATATTTCGCACGAGGACCTGTTGAAAGGGATGATTATGCACTGGAGCTTGCAATGGGTGATGAGTGAGCCGTGTCTAAAGAGTGGTGTTTGCAGTCGGGAGCTCATGTTGTCTTAAGGACTTTCTTTGAAAGTGGAGAAAGGGGC TTTTTCCTCAGCTCACAATTTTCCATCTTCAGTGCTGTTACTCTGTTAGCGATTGTTTGGCATGTAAAAAAGTGTGCTTTCTTGTAAAAATACCATTTTCTAGTTCGCACCTGACAGACGAAGAACACCATGGATTACATGTAAAGTTGTAAACTGAACACCTAATCTTGAGTGCGAATAATGTATAATGATCACCGGAGTTATGAG                               ]




>consensus_4480#0
CCCCCTTCCGCTCGCTCGCGCCGCTCCCTACCGGCCACCACCGCGCGCGGGACAAGCAAC
CTAGCTGCTCCGGCTGCCAAGCCATCGCCATGGCTCCGTGCCCCGCCGCGACCACAACTC
GCATTGGGGCGCCGCCGTTCGCCGCGACGACGGCTCGCCGACCCGCCCGGGGCGCGACGA
CGACGACGAAGGCGCGGGCGTCCGGGCTGCGGCAGGTGGAGGGCCCCGTGTCGGAGAGGG
CGTACTCGTCCTCCTCGCCCGCTCCCACCCACAAGGTCACCGTCCACGACCGCCAGAGAG
GTGTCGTCCACGAGTTCGTCGTCCCACAGGACCAGTACATTCTGCACACCGCGGAGGCGC
AGGACATCACGCTGCCCTTCGCGTGCCGCCATGGTTGCTGTACTAGCTGTGCGGTTCGGA
TAAAGTCAGGACAAATAAGACAACCTGAAGCACTTGGAATATCTGCTGAACTAAAAGATA
AGGGCTATGCATTGTTGTGTGTTGGTTTTCCAACTTCTGATGTTGAAGTTGAAACACAAG
ATGAAGATGAGGTCTACTGGCTCCAGTTTGGAAGATATTTCGCACGAGGACCTGTTGAAA
GGGATGATTATGCACTGGAGCTTGCAATGGGTGATGAGTGAGCCGTGTCTAAAGAGTGGT
GTTTGCAGTCGGGAGCTCATGTTGTCTTAAGGACTTTCTTTGAAAGTGGAGAAAGGGGCT
TTTTCCTCAGCTCACAATTTTCCATCTTCAGTGCTGTTACTCTGTTAGCGATTGTTTGGC
ATGTAAAAAAGTGTGCTTTCTTGTAAAAATACCATTTTCTAGTTCGCACCTGACAGACGA
AGAACACCATGGATTACATGTAAAGTTGTAAACTGAACACCTAATCTTGAGTGCGAATAA
TGAATAATGATCACCGGAGTTATGAGTTTGGGAATGATATGCTGCCATGAAAACCTT

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)