cluster # 4485

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Oryza sativa
cluster # 4485 cluster # 4485 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4485#0 length = 856 sequences # 3

consensusID : consensus_4485#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 856
fasta sequence

                              [AGGCGTTCTTGGAGGTGGTGCCGGCGAGGATGAGGCGCGGGCTGGCGCGGCACCCGGAGGTGAGGGAGCTGGTGGAGGTCGTCATGGACCTCGGCCGCCGGCCGCTCGCGCGGTTCCCGTCCGGGGACTGGGTGATCTCCGAGCAGGCCGTCACCGCCGATGATCTCCACCAGGCCGTCTCAAAGGTAGGCGACTTCTCTGAAGACAACCGATCCGGGATCAACCACTCGTTGCACAGGATCAGCGCCATCCGGAACCGCAAGGCTCATATAATTGGTCTCACTTGCCGTGTGGGCCGGGCTATATCTGGAAGTGCAGAGATGATCCGTGATCTGGTTGTGGGAGGCGGTTCAATATTGGTGATTGGACCTCCAGGGGTTGGGAAGACTACTCTGATCAGGGAAATAGCTAGAATTTTGGCTGATGAGGGTAAGAAACGTGTGATCATAGTGGACACGTCAAATGAAATAGGAGGTGATGGGGATGTGCCTCATTCTGGCATCGGGCGTTCTAGGAGAATGCAAGTTCCCAAAGTTAGCATGCAGCATAACGTAATGATTGAAGCTGTTGAAAATCACATGCCGGAAGTTATTGTTATCGATGAGATTGGTACTGAGCTTGAAGCAATGGCAGCCAGCACCATTGCTCAAAGGGGTGTTCAACTTGTTGGAACTGCACATGGGGTGACAATTGAGAGCATAATTAAAAACCCTTGTTTGCAAGTGCTTGTTGGTGGAATTGAGAGTGTGACTCTTGGCGATGAGGAGGCGAAAAAGCGTAAAGTTCAGAAAACAATTCTTGAGAGAAAAGGACCTCCAACATTTTCATGTGCTGTGGAGATGATTTCAAAGACTGA]

[+] EMBL CB640223             [AGGCGTTCTTGGAGGTGGTGCCGGCGAGGATGAGGCGCGGGCTGGCGCGGCACCCGGAGGTGAGGGAGCTGGTGGAGGTCGTCATGGACCTCGGCCGCCGGCCGCTCGCGCGGTTCCCGTCCGGGGACTGGGTGATCTCCGAGCAGGCCGTCACCGCCGATGATCTCCACCAGGCCGTCTCAAAGGTAGGCGACTTCTCTGAAGACAACCGATCCGGGATCAACCACTCGTTGCACAGGATCAGCGCCATCCGGAACCGCAAGGCTCATATAATTGGTCTCACTTGCCGTGTGGGCCGGGCTATATCTGGAAGTGCAGAGATGATCCGTGATCTGGTTGTGGGAGGCGGTTCAATATTGGTGATTGGACCTCCAGGGGTTGGGAAGACTACTCTGATCAGGGAAATAGCTAGAATTTTGGCTGATGAGGGTAAGAAACGTGTGATCATAGTGGACACGTCAAATGAAATAGGAGGTGATGGGGATGTGCCTCATTCTGGCATCGGGCGTTCTAGGAGAATGCAAGTTCCCAAAGTTAGCATGCAGCATAACGTAATGATT                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB656271             [                                                                                            GGCCGCCTGCCGCTCGCGCGGTTCCCGTCCGGGGACTGGGTGATCTCCGAGCAGGCCGTCACCGCCGATGATCTCCACCAGGCCGTCTCAAAGGTAGGCGACTTCTCTGAAGACAACCGATCCGGGATCAACCACTCGTTGCACAGGATCAGCGCCATCCGGAACCGCAAGGCTCATATAATTGGTCTCACTTGCCGTGTGGGCCGGGCTATATCTGGAAGTGCAGAGATGATCCGTGATCTGGTTGTGGGAGGCGGTTCAATATTGGTGATTGGACCTCCAGGGGTTGGGAAGACTACTCTGATCAGGGAAATAGCTAGAATTTTGGCTGATGAGGGTAAGAAACGTGTGATCATAGTGGACACGTCAAATGAAATAGGAGGTGATGGGGATGTGCCTCATTCTGGCATCGGGCGTTCTAGGAGAATGCAAGTTCCCAAAGTTAGCATGCAGCATAACGTAATGATTGAAGCTGTTGAAAATCACATGCCGGAAGTTATTGTTATCGATGAGATTGGTACTGAGCTTGAAGCAATGGCAGCCAGCACCATTGCTCAAAGGGGTGTTCAACTTGTTGGAACTGCACATGGGGTGACAATTGAGAGCATAATTAAAAACCCTTGTTTGCAAGTGCTTGTTGGTGGAATTGAGAGTGTGACTCTTGGCGATGAGGAGGCGAAAAAGCGTAAAGTTCAGAAAACAATTCTTGAGAGAAAAGGACCTCCAACATTTT                               ]
[-] EMBL CA305780             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAATGGCAGCCAGCACCATTGCTCAAAGGGGTGTTCAACTTGTTGGAACTGCACATGGGGTGACAATTGAGAGCATAATTAAAAACCCTTGTTTGCAAGTGCTTGTTGGTGGAATTGAGAGTGTGACTCTTGGCGATGAGGAGGCGAAAAAGCGTAAAGTTCAGAAAACAATTCTTGAGAGAAAAGGACCTCCAACATTTTCATGTGCTGTGGAGATGATTTCAAAGACTGA]




>consensus_4485#0
AGGCGTTCTTGGAGGTGGTGCCGGCGAGGATGAGGCGCGGGCTGGCGCGGCACCCGGAGG
TGAGGGAGCTGGTGGAGGTCGTCATGGACCTCGGCCGCCGGCCGCTCGCGCGGTTCCCGT
CCGGGGACTGGGTGATCTCCGAGCAGGCCGTCACCGCCGATGATCTCCACCAGGCCGTCT
CAAAGGTAGGCGACTTCTCTGAAGACAACCGATCCGGGATCAACCACTCGTTGCACAGGA
TCAGCGCCATCCGGAACCGCAAGGCTCATATAATTGGTCTCACTTGCCGTGTGGGCCGGG
CTATATCTGGAAGTGCAGAGATGATCCGTGATCTGGTTGTGGGAGGCGGTTCAATATTGG
TGATTGGACCTCCAGGGGTTGGGAAGACTACTCTGATCAGGGAAATAGCTAGAATTTTGG
CTGATGAGGGTAAGAAACGTGTGATCATAGTGGACACGTCAAATGAAATAGGAGGTGATG
GGGATGTGCCTCATTCTGGCATCGGGCGTTCTAGGAGAATGCAAGTTCCCAAAGTTAGCA
TGCAGCATAACGTAATGATTGAAGCTGTTGAAAATCACATGCCGGAAGTTATTGTTATCG
ATGAGATTGGTACTGAGCTTGAAGCAATGGCAGCCAGCACCATTGCTCAAAGGGGTGTTC
AACTTGTTGGAACTGCACATGGGGTGACAATTGAGAGCATAATTAAAAACCCTTGTTTGC
AAGTGCTTGTTGGTGGAATTGAGAGTGTGACTCTTGGCGATGAGGAGGCGAAAAAGCGTA
AAGTTCAGAAAACAATTCTTGAGAGAAAAGGACCTCCAACATTTTCATGTGCTGTGGAGA
TGATTTCAAAGACTGA

clustalw multiple alignements is not computed in this case