cluster # 4493

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Oryza sativa
cluster # 4493 cluster # 4493 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4493#0 length = 1550 sequences # 3
consensusID : consensus_4493#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1550
fasta sequence
                              [TATAGCTAGAGAGCTACTGCGGCACTAGTCACTCTCTCTCTCTCTCTATAGCTTTGCCTGATCATATCAATACCACC-GCCC-TACAAATCTCTCTCTCTCTCTCTCTCAAGAGGAATTGAACTGAAGTTCTTGCAGCACGGTCGAGAAGTAAGGGAGTTGAGAGTTGAGAGAGTAGAGAAGAGGGAGATGGGGAGGGAGAGCTTGCCGACGCTGGCCATGGTGATGGTGCAGCTGGGCTTCGCCGGCATGAATGTGGTGTCCAAGCTGGCGCTGGACACCGGCATGAGCCCCTACGTCCTCATCGCCTACCGCAACATCATCGCCGCCGTCTTCCTCGCCCCCTTCGCCTACTACTTCGAGAGGAAGAGTGGCATGGTGATCACCAAGAAAGTACTTGTCCAGATATTCTTCTCCTCCATTTTTGGCGCGACGCTGAACCAGGTGCTCTACTTCGTGGGGCTCAAGTCCACGACGCCGACGGTGGCGTGCGCGCTCAGCAACACGCTCCCGGCGCTGACGTTCGCCATGGCGGCGGCGTTCCGGATGGAGTCGGTGCGGCTGAGCGCGGCCGCCGGGCAGGCCAAGGTGTTCGGCACGGTGGTCTGCGTCGGCGGCTCCATGATCATGCCGTTCTACAAGGGCCCGCTCCTCAGGCTCTGGGCGTCGCCCATCCACTGGCGGTTCGCGGAGAGCGCCGCGTCGGGCGCGGCGGCGCCAGCCGCGGGCGGCGCCGCCGTCCTCGGCGACGTCCTCATCATCCTCAGCTGCGCCGCGTGGGCCGTGTGGTTCATCATACAGACCAAGATGTCGGAGCGGTTCTCGGCGCCGTACACGAGCACGACCATCATGTGCTTGATGGCCGGTGTGCAGTGCGCCGGCGTCAGCGCCGCCATGGACAGGAGCGTCGCCGTGTGGAAGCTCGGCTTCGACATCCGCCTCTACTCCGTGCTCTACATCGGCGTGGTCGGGTCGGGGATCGCGTTCGCGCTCATGTCGTGGTGCATCCAGGTGCGCGGCCCGCTGTTCGTGTCCATGTTCAGCCCGCTGATGCTGGTGGTCGTGGCCATTGTCGGCTGGGCGATCCTCGACGAGAAGATACACGTCGGCAGCGCGATCGGGTCCGTGCTGATCGTCGCCGGGCTGTACATGGTGCTGTGGGGGAAGGCGAGGGAGATGGGCTCGCCATCGGACCTCGACGGCGGCGGCGGCGGCGGCGGCGTGGTGGAGCTGAACGGCAAGGGCGCCGACGCCGCGACGACCTTGCCGGTGTTCTGCACCACCACCAACAAGCACGAGACGACCCGGAACGGCTGCAGCAACTGAAGCTGATGGCGCACCGGGGCATATGGATGGCGGATCACCTGATTATATATGCGCTAGCTGCACATTTCACAGGCTGTTGCATGTGTGACAACTACATCTTGCTGGGGATATCAATTGGTGCGGTAGTATATAGATGTGGGAGTTTGCTAGTGGTAGCTAGGTAAAAGTTGGGGGAGGTGTGTGAGACTGTACCTGTGCCTTGGTTCTTGACATTAAAAATGGATTGT]

[+] EMBL AK106554             [TATAGCTAGAGAGCTACTGCGGCACTAGTCACTCTCTCTCTCTCTCTATAGCTTTGCCTGATCATATCAATACCACC GCCC TACAAA  TCTCTCTCTCTCTCTCTCAAGAGGAATTGAACTGAAGTTCTTGCAGCACGGTCGAGAAGTAAGGGAGTTGAGAGTTGAGAGAGTAGAGAAGAGGGAGATGGGGAGGGAGAGCTTGCCGACGCTGGCCATGGTGATGGTGCAGCTGGGCTTCGCCGGCATGAATGTGGTGTCCAAGCTGGCGCTGGACACCGGCATGAGCCCCTACGTCCTCATCGCCTACCGCAACATCATCGCCGCCGTCTTCCTCGCCCCCTTCGCCTACTACTTCGAGAGGAAGAGTGGCATGGTGATCACCAAGAAAGTACTTGTCCAGATATTCTTCTCCTCCATTTTTGGCGCGACGCTGAACCAGGTGCTCTACTTCGTGGGGCTCAAGTCCACGACGCCGACGGTGGCGTGCGCGCTCAGCAACACGCTCCCGGCGCTGACGTTCGCCATGGCGGCGGCGTTCCGGATGGAGTCGGTGCGGCTGAGCGCGGCCGCCGGGCAGGCCAAGGTGTTCGGCACGGTGGTCTGCGTCGGCGGCTCCATGATCATGCCGTTCTACAAGGGCCCGCTCCTCAGGCTCTGGGCGTCGCCCATCCACTGGCGGTTCGCGGAGAGCGCCGCGTCGGGCGCGGCGGCGCCAGCCGCGGGCGGCGCCGCCGTCCTCGGCGACGTCCTCATCATCCTCAGCTGCGCCGCGTGGGCCGTGTGGTTCATCATACAGACCAAGATGTCGGAGCGGTTCTCGGCGCCGTACACGAGCACGACCATCATGTGCTTGATGGCCGGTGTGCAGTGCGCCGGCGTCAGCGCCGCCATGGACAGGAGCGTCGCCGTGTGGAAGCTCGGCTTCGACATCCGCCTCTACTCCGTGCTCTACATCGGCGTGGTCGGGTCGGGGATCGCGTTCGCGCTCATGTCGTGGTGCATCCAGGTGCGCGGCCCGCTGTTCGTGTCCATGTTCAGCCCGCTGATGCTGGTGGTCGTGGCCATTGTCGGCTGGGCGATCCTCGACGAGAAGATACACGTCGGCAGCGCGATCGGGTCCGTGCTGATCGTCGCCGGGCTGTACATGGTGCTGTGGGGGAAGGCGAGGGAGATGGGCTCGCCATCGGACCTCGACGGCGGCGGCGGCGGCGGCGGCGTGGTGGAGCTGAACGGCAAGGGCGCCGACGCCGCGACGACCTTGCCGGTGTTCTGCACCACCACCAACAAGCACGAGACGACCCGGAACGGCTGCAGCAACTGAAGCTGATGGCGCACCGGGGCATATGGATGGCGGATCACCTGATTATATATGCGCTAGCTGCACATTTCACAGGCTGTTGCATGTGTGACAACTACATCTTGCTGGGGATATCAATTGGTGCGGTAGTATATAGATGTGGGAGTTTGCTAGTGGTAGCTAGGTAAAAGTTGGGGGAGGTGTGTGAGACTGTACCTGTGCCTTGGTTCTTGACATTAAAAATGGATTGT]
[+] EMBL C99297               [                                                               ggtTCAATACCACC GCCN TACAAATCTCTCTCTCTCTCTCTCTCAAGAGGAATTGAACTGAAGTTCTTGCAGCACGGTCGAGAAGTAAGGGAGTTGAGAGTTGAGAGAGTAGAGAAGAGGGAGATGGGGAGGGAGAGCTTGCCGACGCTGGCCATGGTGATGGTGCAGCTGG  TTCGCCGGCATGAATGTGGTGTCCAAG TGGCGCTGGACACCGGCATGAGCCCCTACGTCCTCATCGCCTACCGCAACATCATCGCCGCCGTCTTCCTCGCCCCCTTCGCCTACTACTTCGAGAGGAAGAGTGGCATGGTGATCACCAAGAAAGTACTTGTCCAGATATTCTTCTCCTCCATTTTTGGCGCGACGCTGAACCAGGTGCTCTA TTCGTGGGGCTCAAGTCCACGACGCCGACGGTGGCGTGCGCGCTCAGCAACACGCTCCCGGCGCTGACGTTCGCCATGGCGGCGGCGTTCCGGATGGAGTCGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL OSC567               [                                                                    nanccnACCNGCCCTTACAAATCTCTCTCTCTCTCTCTCTCAAGAGGAATTGAACTGAAGTTCTTGCAGCACGGTCGAGAAGTAAGGGAGTTGAGAGTTGAGAGAGTAGAGAAGAGGGAGATGGGGAGGGAGAGCTTGCCGACGCTNGCCATGGTGATGGTGCAGCTGGGCTTCG CGGCATGAATGTGGTNTCCAAGCTGGCGCTNGACACCGGCATGAG CCCTACGTCCTCATCGCCTACCGCAACATCATCGCCGCCGTCTTCCTCNCCCCCTTCGCCTACTACTTCGAGAGGAAGAGTNGCATGGTGATCANCAAGAAAGTACTTGTCCAGATATTCTTCTCCTCCATTTTTTGCGCGACGTTGAACCAGGTGCTCTACTTCGTGGGGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]




>consensus_4493#0
TATAGCTAGAGAGCTACTGCGGCACTAGTCACTCTCTCTCTCTCTCTATAGCTTTGCCTG
ATCATATCAATACCACCGCCCTACAAATCTCTCTCTCTCTCTCTCTCAAGAGGAATTGAA
CTGAAGTTCTTGCAGCACGGTCGAGAAGTAAGGGAGTTGAGAGTTGAGAGAGTAGAGAAG
AGGGAGATGGGGAGGGAGAGCTTGCCGACGCTGGCCATGGTGATGGTGCAGCTGGGCTTC
GCCGGCATGAATGTGGTGTCCAAGCTGGCGCTGGACACCGGCATGAGCCCCTACGTCCTC
ATCGCCTACCGCAACATCATCGCCGCCGTCTTCCTCGCCCCCTTCGCCTACTACTTCGAG
AGGAAGAGTGGCATGGTGATCACCAAGAAAGTACTTGTCCAGATATTCTTCTCCTCCATT
TTTGGCGCGACGCTGAACCAGGTGCTCTACTTCGTGGGGCTCAAGTCCACGACGCCGACG
GTGGCGTGCGCGCTCAGCAACACGCTCCCGGCGCTGACGTTCGCCATGGCGGCGGCGTTC
CGGATGGAGTCGGTGCGGCTGAGCGCGGCCGCCGGGCAGGCCAAGGTGTTCGGCACGGTG
GTCTGCGTCGGCGGCTCCATGATCATGCCGTTCTACAAGGGCCCGCTCCTCAGGCTCTGG
GCGTCGCCCATCCACTGGCGGTTCGCGGAGAGCGCCGCGTCGGGCGCGGCGGCGCCAGCC
GCGGGCGGCGCCGCCGTCCTCGGCGACGTCCTCATCATCCTCAGCTGCGCCGCGTGGGCC
GTGTGGTTCATCATACAGACCAAGATGTCGGAGCGGTTCTCGGCGCCGTACACGAGCACG
ACCATCATGTGCTTGATGGCCGGTGTGCAGTGCGCCGGCGTCAGCGCCGCCATGGACAGG
AGCGTCGCCGTGTGGAAGCTCGGCTTCGACATCCGCCTCTACTCCGTGCTCTACATCGGC
GTGGTCGGGTCGGGGATCGCGTTCGCGCTCATGTCGTGGTGCATCCAGGTGCGCGGCCCG
CTGTTCGTGTCCATGTTCAGCCCGCTGATGCTGGTGGTCGTGGCCATTGTCGGCTGGGCG
ATCCTCGACGAGAAGATACACGTCGGCAGCGCGATCGGGTCCGTGCTGATCGTCGCCGGG
CTGTACATGGTGCTGTGGGGGAAGGCGAGGGAGATGGGCTCGCCATCGGACCTCGACGGC
GGCGGCGGCGGCGGCGGCGTGGTGGAGCTGAACGGCAAGGGCGCCGACGCCGCGACGACC
TTGCCGGTGTTCTGCACCACCACCAACAAGCACGAGACGACCCGGAACGGCTGCAGCAAC
TGAAGCTGATGGCGCACCGGGGCATATGGATGGCGGATCACCTGATTATATATGCGCTAG
CTGCACATTTCACAGGCTGTTGCATGTGTGACAACTACATCTTGCTGGGGATATCAATTG
GTGCGGTAGTATATAGATGTGGGAGTTTGCTAGTGGTAGCTAGGTAAAAGTTGGGGGAGG
TGTGTGAGACTGTACCTGTGCCTTGGTTCTTGACATTAAAAATGGATTGT
clustalw multiple alignements is not computed in this case