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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4521 cluster # 4521       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4521#0 length = 1381 sequences # 3  

consensusID : consensus_4521#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1381
fasta sequence
                              [CGCCCAGATCCACCGCCCCCCGCCTTGCCTCCTCCGCGTCGCCGCGCCAGTGCGCCCCGCCTCGCCGCCGCCCTCCTCCTCCTCGTCGTCAGGTGTTATGTTTTTCATCACTATAAAGTCCAATAAAGTGAAGAGTGACTCTGCATAGCCAGATGGCTGTGGACAGAGATATCTTTGGTATCTCAGGTCCGACATATCTGAATCCTGTTAATTGGAACTGTGAGCATAATCGGAGATCTGTGGCTGCATGCTTAGTTCAGGCTGTATATGTTTTGGAGAGGGACCGGCAACTAGGTCGTCAATCTGTTGAAGCCTTGGGACCTCCTTGGTGGGAATTCTTCCATTTTGAGTTGATCCGCAAGCTTGTCGATGATGCTGACTTGTCTATTTTCGGTGCAATATTTGAATTCAATCCTCCTTCAAGTAAAGAATCTTCTGCTGATAATGCACCGAGATTTGTTATTGCCTTCAGAGGCACTATAACTGAGAAGGAAACCATCTCAAGGGATATCGCCCTTGACCTCCACCTTGTCCAAAATGGTCTCCATCGGACCTCAAGATTTACAATTGCAATGCAAGCTGTCCAAAACGTCGCCTCGGTTTTCCCTGGCTCAAACATCTGGCTAGCTGGGCACTCACTGGGCGCAGGTATGGCCATCCTTACTGGAAGAAACATGGTTAAAAAGGGTGTGCTTTTGGAAAGCTATCTCTTCAACCCACCTTTTGTTGCCGCCCCAATCGAGAGGATAAGTGATGAGAGAGTGAAGCATGGTTTCCGCATTGCAAGAAGTGTAATTACTGCTGGATTAGCCATTGCAATGAAAGGAAAAGGCGAGGGGAGCAGCCAGAGGTCTGTTGCAGAAGATTCTTTCCACATTTTGTCATCATGGACGCCATATCTGTTTGTCAATCCAGGAGACCATATCTGTTCAGAGTACATCGGCTACTTCCAGCATCGGAAGAACATGGAGGATCTCGGTGCTGGATTTATCGAGAAGCTCGCAACCCAAAATTCCATAGGAGATCTGTTTTACAAGGCATTAGGATGGGAATCGGAACCACTGCACCTTCTTCCATCTGCAGACTTAATTGTCAACGTAAGCCCTTCACCGGACTTCAAATATGCTCATGGCATCAGCCAGTGGTGGCAGCCTGAGCTGAACTTGCAGTGCAGTAAATATCGGTACTCTGTAGGTGCATGACATTGGAAAAAATGTCTTAGGAGACCCTTCTTACACTTTCGTTTATTCATTGTGGTTCGTTCCACTCTATTGTAGCTGTCAATATGCTGTAATAGATGTTTCTTGAACCTCTGATTCTGTTGACATGAAAAAAACTTGTAATTTCGTGGAGCAAAAANCAAANNNNAANAAAAANAAGA]

[+] EMBL AK058880             [CGCCCAGATCCACCGCCCCCCGCCTTGCCTCCTCCGCGTCGCCGCGCCAGTGCGCCCCGCCTCGCCGCCGCCCTCCTCCTCCTCGTCGTCAGGTGTTATGTTTTTCATCACTATAAAGTCCAATAAAGTGAAGAGTGACTCTGCATAGCCAGATGGCTGTGGACAGAGATATCTTTGGTATCTCAGGTCCGACATATCTGAATCCTGTTAATTGGAACTGTGAGCATAATCGGAGATCTGTGGCTGCATGCTTAGTTCAGGCTGTATATGTTTTGGAGAGGGACCGGCAACTAGGTCGTCAATCTGTTGAAGCCTTGGGACCTCCTTGGTGGGAATTCTTCCATTTTGAGTTGATCCGCAAGCTTGTCGATGATGCTGACTTGTCTATTTTCGGTGCAATATTTGAATTCAATCCTCCTTCAAGTAAAGAATCTTCTGCTGATAATGCACCGAGATTTGTTATTGCCTTCAGAGGCACTATAACTGAGAAGGAAACCATCTCAAGGGATATCGCCCTTGACCTCCACCTTGTCCAAAATGGTCTCCATCGGACCTCAAGATTTACAATTGCAATGCAAGCTGTCCAAAACGTCGCCTCGGTTTTCCCTGGCTCAAACATCTGGCTAGCTGGGCACTCACTGGGCGCAGGTATGGCCATCCTTACTGGAAGAAACATGGTTAAAAAGGGTGTGCTTTTGGAAAGCTATCTCTTCAACCCACCTTTTGTTGCCGCCCCAATCGAGAGGATAAGTGATGAGAGAGTGAAGCATGGTTTCCGCATTGCAAGAAGTGTAATTACTGCTGGATTAGCCATTGCAATGAAAGGAAAAGGCGAGGGGAGCAGCCAGAGGTCTGTTGCAGAAGATTCTTTCCACATTTTGTCATCATGGACGCCATATCTGTTTGTCAATCCAGGAGACCATATCTGTTCAGAGTACATCGGCTACTTCCAGCATCGGAAGAACATGGAGGATCTCGGTGCTGGATTTATCGAGAAGCTCGCAACCCAAAATTCCATAGGAGATCTGTTTTACAAGGCATTAGGATGGGAATCGGAACCACTGCACCTTCTTCCATCTGCAGACTTAATTGTCAACGTAAGCCCTTCACCGGACTTCAAATATGCTCATGGCATCAGCCAGTGGTGGCAGCCTGAGCTGAACTTGCAGTGCAGTAAATATCGGTACTCTGTAGGTGCATGACATTGGAAAAAATGTCTTAGGAGACCCTTCTTACACTTTCGTTTATTCATTGTGGTTCGTTCCACTCTATTGTAGCTGTCAATATGCTGTAATAGATGTTTCTTGAACCTCTGATTCTGTTGACATGAAAAAAACTTGTAAT                                     ]
[+] EMBL AU032381             [                                                                                                                                                                                                                                             CTGTGGCTGCATGCTTAGTTCAGGCTGTATATGTTTTGGAGAGGGACCGGCAACTAGGTCGTCAATCTGTTGAAGCCTTGGGACCTCCTTGGTGGGAATTCTTCCATTTTGAGTTGATCCGCAAGCTTGTCGATGATGCTGACTTGTCTATTTTCGGNGCAATATTTGAATTCAATCCTCCTTCAAGTAAAGAATCTTCTGCTGATAATGCACCGAGATTTGTTATTNCCTTCAGNGGCACTATAACTGAGAAGGAAACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU032382             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TAGCTGTCAATATNCTGTAATAGNTGTTTCTTGAACCTCTGATTCTGTTGACATGANAAANACTTGTAATTTCGTGGAGCAAAAANCAAANNNNAANAAAAANAAGA]


>consensus_4521#0 CGCCCAGATCCACCGCCCCCCGCCTTGCCTCCTCCGCGTCGCCGCGCCAGTGCGCCCCGC CTCGCCGCCGCCCTCCTCCTCCTCGTCGTCAGGTGTTATGTTTTTCATCACTATAAAGTC CAATAAAGTGAAGAGTGACTCTGCATAGCCAGATGGCTGTGGACAGAGATATCTTTGGTA TCTCAGGTCCGACATATCTGAATCCTGTTAATTGGAACTGTGAGCATAATCGGAGATCTG TGGCTGCATGCTTAGTTCAGGCTGTATATGTTTTGGAGAGGGACCGGCAACTAGGTCGTC AATCTGTTGAAGCCTTGGGACCTCCTTGGTGGGAATTCTTCCATTTTGAGTTGATCCGCA AGCTTGTCGATGATGCTGACTTGTCTATTTTCGGTGCAATATTTGAATTCAATCCTCCTT CAAGTAAAGAATCTTCTGCTGATAATGCACCGAGATTTGTTATTGCCTTCAGAGGCACTA TAACTGAGAAGGAAACCATCTCAAGGGATATCGCCCTTGACCTCCACCTTGTCCAAAATG GTCTCCATCGGACCTCAAGATTTACAATTGCAATGCAAGCTGTCCAAAACGTCGCCTCGG TTTTCCCTGGCTCAAACATCTGGCTAGCTGGGCACTCACTGGGCGCAGGTATGGCCATCC TTACTGGAAGAAACATGGTTAAAAAGGGTGTGCTTTTGGAAAGCTATCTCTTCAACCCAC CTTTTGTTGCCGCCCCAATCGAGAGGATAAGTGATGAGAGAGTGAAGCATGGTTTCCGCA TTGCAAGAAGTGTAATTACTGCTGGATTAGCCATTGCAATGAAAGGAAAAGGCGAGGGGA GCAGCCAGAGGTCTGTTGCAGAAGATTCTTTCCACATTTTGTCATCATGGACGCCATATC TGTTTGTCAATCCAGGAGACCATATCTGTTCAGAGTACATCGGCTACTTCCAGCATCGGA AGAACATGGAGGATCTCGGTGCTGGATTTATCGAGAAGCTCGCAACCCAAAATTCCATAG GAGATCTGTTTTACAAGGCATTAGGATGGGAATCGGAACCACTGCACCTTCTTCCATCTG CAGACTTAATTGTCAACGTAAGCCCTTCACCGGACTTCAAATATGCTCATGGCATCAGCC AGTGGTGGCAGCCTGAGCTGAACTTGCAGTGCAGTAAATATCGGTACTCTGTAGGTGCAT GACATTGGAAAAAATGTCTTAGGAGACCCTTCTTACACTTTCGTTTATTCATTGTGGTTC GTTCCACTCTATTGTAGCTGTCAATATGCTGTAATAGATGTTTCTTGAACCTCTGATTCT GTTGACATGAAAAAAACTTGTAATTTCGTGGAGCAAAAANCAAANNNNAANAAAAANAAG A



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)