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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4538#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1500 fasta sequence
[CAAGTCAATCTCCCGATTCCACCTCCGTAATCCCCGCTACCGCCGTGGTCGGAGCCGCCGAGCGCCGCCGTCGCGCCTCCCTCCACCGTCTTCCCACGCCGCCGCGCGACGGCTGCGGCGGTCGTCTTCCCCATTCGTCCCATCGATCCTCCTCCGGCTCAGTTCCACAGAAGCGCCACCTCATCACGAAGGCAATTTTACAGTTCGAACATTAGGAAGCATGAGCTATTTCCAGGCTACAACATACAAGCCTCATAATGGGATCATTGTGGACAAGGTAGCAATAGGTCTTGGGAGTACTTGCAAATTGCTTCATGAAAGGGCCAAATGTTCGTATTCCAATAGATTCATCAAGCTTCAAGAGCAAGTATACCCAAGGCTTCTTCTTGTTGCTGCTTGCCATAACAGGATTGGTCCTGTGTATGCCTCAAGTGGGAAAGGAAACTCTGAGCGTGTCAATGATCCCTTCTCCATGGAATCTTTGAACAAAGCTATAGCTGGAACTAAAAAGCAATGGCCCATACAAGATATGCTGATAGATCAAATTTCTAAGATTAGAGGGTCTGGCTCTGGTGGAAATGGTGGTGGTAATAAAAACAGTCATGAAGGCAGTGGTGGTGGCTCAGAGGACGAATCTTTGACGGAGTCATTATATGAAATGGTCCAAGTTTTGTTGGCAACTATTGCCTTTATACTCATGTACATCCATATAATAAGAGGAGAGGAGTTATACCGCCTTGCGAGGGACTACACTAGATACCTGGTTACTGGTAAGAGAACTTCCAGACTGAAACGCGCCATGTTAAACTGGCACAATTTCTGTGAGGGCATCACCAACAAGGATAGCGTGCAAGAGTCAACATTTGAAAGATCAACTTCTGAACCAATGTGGTGGCAGCAGCCCCTAAAGTTTGTCCATCGCATTGAGGAACTTTACAGAGGCTATTTTCGCCCACATGCCCAGGAATCATAGTTCTGATGATT-GAGGATCCCTTTGGACTCTTCTCAAGATTTCA-GTGTATGTTGTAACCGTGCATAGGTAGGCACTAGTTGCAT-GGACGGTGCAGTG-AAGCGCATGGAGGAAACTAGAC-GGTCTGTTCTTTACT-GCATTCAGTTTTTCTTGCGTAGTGCAGCTGAATACTA-CGTTATATATT--GTCTGTATTGTTCATTACAGAACATAAAGGAAGGTGATAGTTCGTCTGGACAATTTTGCCGTTTTTGAAACCTCGCTGCTATGATGTGATCGTCTGCCGGTCAGTTAGGTGCAGGTGACAACTTGAATGCTGCATCTGATTCATCATAACTACAAAGAGTACCAGCTATACCCAATGAATGCAGCAAAAAATGTACCTGTAAGCTGTGGTCACTGTAAGCTTTGTAAATTTTGTGTTCTATGTTTTGTCCAACTCCCCATGTTGGTTCTTTGTTGGCCTATCTGAGCTATCTAGAGTGATTTATGGGAGCAACTATTTCTTCCAACCTGGAACATGAAACATCCAT]
[+] EMBL AK064114 [CAAGTCAATCTCCCGATTCCACCTCCGTAATCCCCGCTACCGCCGTGGTCGGAGCCGCCGAGCGCCGCCGTCGCGCCTCCCTCCACCGTCTTCCCACGCCGCCGCGCGACGGCTGCGGCGGTCGTCTTCCCCATTCGTCCCATCGATCCTCCTCCGGCTCAGTTCCACAGAAGCGCCACCTCATCACGAAGGCAATTTTACAGTTCGAACATTAGGAAGCATGAGCTATTTCCAGGCTACAACATACAAGCCTCATAATGGGATCATTGTGGACAAGGTAGCAATAGGTCTTGGGAGTACTTGCAAATTGCTTCATGAAAGGGCCAAATGTTCGTATTCCAATAGATTCATCAAGCTTCAAGAGCAAGTATACCCAAGGCTTCTTCTTGTTGCTGCTTGCCATAACAGGATTGGTCCTGTGTATGCCTCAAGTGGGAAAGGAAACTCTGAGCGTGTCAATGATCCCTTCTCCATGGAATCTTTGAACAAAGCTATAGCTGGAACTAAAAAGCAATGGCCCATACAAGATATGCTGATAGATCAAATTTCTAAGATTAGAGGGTCTGGCTCTGGTGGAAATGGTGGTGGTAATAAAAACAGTCATGAAGGCAGAGGTGGTGGCTCAGAGGACGAATCTTTGACGGAGTCATTATATGAAATGGTCCAAGTTTTGTTGGCAACTATTGCCTTTATACTCATGTACATCCATATAATAAGAGGAGAGGAGTTATACCGCCTTGCGAGGGACTACACTAGATACCTGGTTACTGGTAAGAGAACTTCCAGACTGAAACGCGCCATGTTAAACTGGCACAATTTCTGTGAGGGCATCACCAACAAGGATAGCGTGCAAGAGTCAACATTTGAAAGATCAACTTCTGAACCAATGTGGTGGCAGCAGCCCCTAAAGTTTGTCCATCGCATTGAGGAACTTTACAGAGGCTATTTTCGCCCACATGCCCAGGAATCATAGTTCTGATGATT GAGGATCCCTTTGGACTCTTCTCAAGATTTCA GTGTATGTTGTAACCGTGCATAGGTAGGCACTAGTTGCAT GGACGGTGCAGTG AAGCGCATGGAGGAAACTAGAC GGTCTGTTCTTTACT GCATTCAGTTTTTCTTGCGTAGTGCAGCTGAATACTA CGTTATATATT GTCTGTATTGTTCATTACAGAACATAAAGGAAGGTGATAGTTCGTCTGGACAATTTTGCCGTTTTTGAAACCTCGCTGCTATGATGTGATCGTCTGCCGGTCAGTTAGGTGCAGGTGACAACTTGAATGCTGCATCTGATTCATCATAACTACAAAGAGTACCAGCTATACCCAATGAATGCAGCAAAAAATGTACCTGTAAGCTGTGGTCACTGTAAGCTTTGTAAATTTTGTGTTCTATGTTTTGTCCAACTCCCCATGTTGGTTCTTTGTTGGCCTATCTGAGCTATCTAGAGTGATTTATGGGAGCAACTATTTCTTCCAACCTGGAACATGAAACATCCAT]
[+] EMBL AK062853 [ ATCCCCGTTACCGCCGTGGTCGGAGCCGCCGAGCGCCGCCGTCGCGCCTCCCTCCACCGTCTTCCCACGCCGCCGCGCGACGGCTGCGGCGGTCGTCTTCCCCATTCGTCCCATCGATCCTCCTCCGGCTCAGTTCCACAGAAGCGCCACCTCATCACGAAGGCAATTTTACAGTTCGAACATTAGGAAGCATGAGCTATTTCCAGGCTACAACATACAAGCCTCATAATGGGATCATTGTGGACAAGGTAGCAATAGGTCTTGGGAGTACTTGCAAATTGCTTCATGAAAGGGCCAAATGTTCGTATTCCAATAGATTCATCAAGCTTCAAGAGCAAGTATACCCAAGGCTTCTTCTTGTTGCTGCTTGCCATAACAGGATTGGTCCTGTGTATGCCTCAAGTGGGAAAGGAAACTCTGAGCGTGTCAATGATCCCTTCTCCATGGAATCTTTGAACAAAGCTATAGCTGGAACTAAAAAGCAATGGCCCATACAAGATATGCTGATAGATCAAATTTCTAAGATTAGAGGGTCTGGCTCTGGTGGAAATGGTGGTGGTAATAAAAACAGTCATGAAGGCAGTGGTGGTGGCTCAGAGGACGAATCTTTGACGGAGTCATTATATGAAATGGTCCAAGTTTTGTTGGCAACTATTGCCTTTATACTCATGTACATCCATATAATAAGAGGAGAGGAGTTATACCGCCTTGCGAGGGACTACACTAGATACCTGGTTACTGGTAAGAGAACTTCCAGACTGAAACGCGCCATGTTAAACTGGCACAATTTCTGTGAGGGCATCACCAACAAGGATAGCGTGCAAGAGTCAACATTTGAAAGATCAACTTCTGAACCAATGTGGTGGCAGCAGCCCCTAAAGTTTGTCCATCGCATTGAGGAACTTTACAGAGGCTATTTTCGCCCACATGCCCAGGAATCATAGTTCTGATGATT GAGGATCCCTTTGGACTCTTCTCAAGATTTCA GTGTATGTTGTAACCGTGCATAGGTAGGCACTAGTTGCAT GGACGGTGCAGTG AAGCGCATGGAGGAAACTAGAC GGTCTGTTCTTTACT GCATTCAGTTTTTCTTGCGTAGTGCAGCTGAATACTA CGTTATATATT GTCTGTATTGTTCATTACAGAACATAAAGGAAGGTGATAGT ]
[+] EMBL CA764476 [ TAGCAATAGGTCTTGGGAGTACTTGCAAATTGCTTCATGAAAGGGCCAAATGTTCGTATTCCAATAGATTCATCAAGCTTCAAGAGCAAGTATACCCAAGGCTTCTTCTTGTTGCTGCTTGCCATAACAGGATTGGTCCTGTGTATGCCTCAAGTGGGAAAGGAAACTCTGAGCGTGTCAATGATCCCTACTCCATGGAATCTTTGAACAAAGCTATAGCTGGAACTAAAAAGCAATGGCCCATACAAGATATGCTGATAGATCAAATTTCTAAGATTAGAGGGTCTGGCTCTGGTGGAAATGGTGGTGGTAATAAAAACAGTCATGAAGGCAGTGGTGGTGGCTCAGAGGACGAATCTTTGACGGAGTCATTATATGAAATGGTCCAAGTTTTGTTGGCAACTATTGCCTTTATACTCATGTACATCCATATAATAAGAGGAGAGGAGTTATACCGCCTTGCGAGGGACTACACTAGATACCTGGTTACTGGTAAGAGAACTTCCAGACTGAAACGCGCCATGTTAAACTGGCACGATTTCTGTGAGGGCATCACCAACAAGGATAGCGTGCAAGAGTCAACATTTGAAAGATCAACTTCTGAACCAATGTGGTGGCAGCAGCCCCTAAAGNTTGTCCATCGCATTGAGGAACTTTACAGAGGCTATTTTCGCCCACATGCCCAGGAATCATAGTTCTGATGATTGGAGGATCCCTTTGGACTCTTCTCAAGANTTCAGGGGTATGNTGNAACCGNGCATAGGTAGGCACTAGTTGCATGGGCCGGTGCAGTGAAANCGCATGGAAGNAACTANACGGGCCTGTTCTTT CTGGNATTCAGNTTTTNTTGCGNANGGCAGCTGAANACCACCGTTTTA ATTGGGCCGGGATTGGTC ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||