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Oryza sativa
cluster # 455 cluster # 455       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_455#0 length = 1482 sequences # 2  

consensusID : consensus_455#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1482
fasta sequence
                              [CTCATCCATGTACAAATGTTTGTATATGAACTAGTTACCTAATGACCTGAGACCGAATCAAAATGTTCCATTCAAGATAGCTACATGTGTGGCATTGCCTTGTTCCACCTGCAGCCAAACTGTGTAATATAAGCAAGCTTGCTATAGGGGGACTAGGCACTCTAGGCTTACCTAATCCACCCCTTCAGGCTTCAGCTGTTCAGTGCAGACACAGAGAATGAATTGGGTGGAGTTTCTGAAGCCCGTAGTCGCAATGCTGGTGTTTGACACGCTCTTCGCGCTGATGACAGCATTGGTCAAGAAGGCTTTGGCTGATGGGTTAAACCACGTTGTCTTTATCACCCTACGCCAGTTTGTAGCGGCAGTCCTGCTCGCTCCGATTGCTTATTTCAAAGAAAGGAATACAAGACCAAGATTTACAACAGAGATCTTTGCCTACATGTTCATGAGCGCATTGCTTGGGGGATTATGTGCTCAGTATCTGTTCTTTCTGGGGTTGAGCTACACTACAGCAACACTGACTGCAACATTCTCCAACATGACTCCGGTTTTCACCTTTTTAATTGCTATCCCTCTCCAACTGGAAACAGTTGATGTGAGGAGCAAGGCGGGGCTGGCAAAAGTCATAGGAACGCTCATGTCTGTTGGTGGCGCGACGCTATTGGGCCTGTACAAGGGAGCTGCCTTGACTCACACAACATCGTCAGTCCAAGAGCACGGTGCAAAGGGTATTACCTCCAACAGCAGCAGCTTCAGCAAGGAGCGATGGATGCTAGGCTCGGTCTTGCTGGTTTTAAACTGCATCAGCTTCTCGTTATGGATGCTTCTGCAGGGGAAGCTCACCAAGAAATACCCTGCAGTCTTCTCCAGCACTGCATTCATGACCTCGTTCAGCTCAATGCAAGCAGGAGTTGTTGCACTCACAACACAAAGGCGCCTTTCGGTGTGGTTGATTCGAGGAAACATACAGATCATTGCTGTTGTTTTTGCAGGAGTGGGGGTATCAGGGATAGGGTATGTGCTGATGACCTGGTGCATCGAGAAGAAGGGCCCAGTTTTCACTGCAGGCTTCATGCCTCTCATCCAGATCATGGCTGCACTCATTGATCTCTTCTTCCTTCATGAGCAGATTTTCCTTGGAAGTGCGATAGGTGCTGCTCTTGTGATTGGAGGCCTCTATCTTCTCCTCTGGGGTAAGAGCAAGGAAGCATCAGCTACTGCTTTATTGGCAAAAGCAGTGGAACAAGACGGGGAGAAAAAGGAAAATTTGGAAGCATAAAATGGGCAATTGTAGTAGTTAGTCTTTGTGGTGTAAAAGATCATCCTAAATAACTCATTGTAGTTTTTTTTTCTTTTTTGGCAGTGCTCTCGTATGCACATGTGCAGTGATTTGCACCAAGCACTTCTCTTCTAGATTTTGTACAACCTAAACCGAAATGGTAAATAATCGTGATTTGCCCCTGAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK070945             [CTCATCCATGTACAAATGTTTGTATATGAACTAGTTACCTAATGACCTGAGACCGAATCAAAATGTTCCATTCAAGATAGCTACATGTGTGGCATTGCCTTGTTCCACCTGCAGCCAAACTGTGTAATATAAGCAAGCTTGCTATAGGGGGACTAGGCACTCTAGGCTTACCTAATCCACCCCTTCAGGCTTCAGCTGTTCAGTGCAGACACAGAGAATGAATTGGGTGGAGTTTCTGAAGCCCGTAGTCGCAATGCTGGTGTTTGACACGCTCTTCGCGCTGATGACAGCATTGGTCAAGAAGGCTTTGGCTGATGGGTTAAACCACGTTGTCTTTATCACCCTACGCCAGTTTGTAGCGGCAGTCCTGCTCGCTCCGATTGCTTATTTCAAAGAAAGGAATACAAGACCAAGATTTACAACAGAGATCTTTGCCTACATGTTCATGAGCGCATTGCTTGGGGGATTATGTGCTCAGTATCTGTTCTTTCTGGGGTTGAGCTACACTACAGCAACACTGACTGCAACATTCTCCAACATGACTCCGGTTTTCACCTTTTTAATTGCTATCCCTCTCCAACTGGAAACAGTTGATGTGAGGAGCAAGGCGGGGCTGGCAAAAGTCATAGGAACGCTCATGTCTGTTGGTGGCGCGACGCTATTGGGCCTGTACAAGGGAGCTGCCTTGACTCACACAACATCGTCAGTCCAAGAGCACGGTGCAAAGGGTATTACCTCCAACAGCAGCAGCTTCAGCAAGGAGCGATGGATGCTAGGCTCGGTCTTGCTGGTTTTAAACTGCATCAGCTTCTCGTTATGGATGCTTCTGCAGGGGAAGCTCACCAAGAAATACCCTGCAGTCTTCTCCAGCACTGCATTCATGACCTCGTTCAGCTCAATGCAAGCAGGAGTTGTTGCACTCACAACACAAAGGCGCCTTTCGGTGTGGTTGATTCGAGGAAACATACAGATCATTGCTGTTGTTTTTGCAGGAGTGGGGGTATCAGGGATAGGGTATGTGCTGATGACCTGGTGCATCGAGAAGAAGGGCCCAGTTTTCACTGCAGGCTTCATGCCTCTCATCCAGATCATGGCTGCACTCATTGATCTCTTCTTCCTTCATGAGCAGATTTTCCTTGGAAGTGCGATAGGTGCTGCTCTTGTGATTGGAGGCCTCTATCTTCTCCTCTGGGGTAAGAGCAAGGAAGCATCAGCTACTGCTTTATTGGCAAAAGCAGTGGAACAAGACGGGGAGAAAAAGGAAAATTTGGAAGCATAAAATGGGCAATTGTAGTAGTTAGTCTTTGTGGTGTAAAAGATCATCCTAAATAACTCATTGTAGTTTTTTTTTCTTTTTTGGCAGTGCTCTCGTATGCACATGTGCAGTGATTTGCACCAAGCACTTCTCTTCTAGATTTTGTACAACCTAAACCGAAATGGTAAATAATCGTGA                             ]
[-] EMBL CA759936             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                aggggGGTTTTAAACTGCATCAGCTTCTCGTTATGGATGCTTTTGCAGGGGAAGCTCACCAAGAAATACCCTGCAGTCTTCTCCAGCACTGCATTCATGACCTCGTTCAGCTCAATGCAAGCAGGAGTTGTTGCACTCACAACACAAAGGCGCCCTTCGGTGTGGTTGATTCGAGGAAACATACAGATCATTGCTGTTGTTTTTGCAGGAGTGGGGGTATCAGGGATAGGGTATGTGCTGATGACCTGGTGCATCGAGAAGAAGGGCCCAGTTTTCACTGCAGGCTTCATGCCTTTCATCCAGATCATGGCTGCCCTCATTGATCTCTTCTTCCTTCATGAGCAGATTTTCCTTGGAAGTGCGATAGGTGCTGCTCTTGTGATTGGAGGCCTCTATTTTTTCCTTTGGGGTAAGAGCAAGGAAGCATCAGCTTCTGCTTTATTGGCAAAAGCAGTGGAACAAGACGGGGAGAAAAAGGAAAATTTGGAAGCATAAAATGGGCAATTGTAGTAGTTAGTCTTTGTGGTGTAAAAGATCATCCTAAATAACTCATTGTAGTTTTTTTTTCTTTTTTGGCAGTGCTCTTGTATGCACATGTGCAGTGATTTGCCCCAAGCCCTTCTTTTTTAGATTTTGTACAACCTAAACCGAAATGGTAAATAATCGTGATTTGCCCCTGAAAAAAAAAAAAAAAAAAA]


>consensus_455#0 CTCATCCATGTACAAATGTTTGTATATGAACTAGTTACCTAATGACCTGAGACCGAATCA AAATGTTCCATTCAAGATAGCTACATGTGTGGCATTGCCTTGTTCCACCTGCAGCCAAAC TGTGTAATATAAGCAAGCTTGCTATAGGGGGACTAGGCACTCTAGGCTTACCTAATCCAC CCCTTCAGGCTTCAGCTGTTCAGTGCAGACACAGAGAATGAATTGGGTGGAGTTTCTGAA GCCCGTAGTCGCAATGCTGGTGTTTGACACGCTCTTCGCGCTGATGACAGCATTGGTCAA GAAGGCTTTGGCTGATGGGTTAAACCACGTTGTCTTTATCACCCTACGCCAGTTTGTAGC GGCAGTCCTGCTCGCTCCGATTGCTTATTTCAAAGAAAGGAATACAAGACCAAGATTTAC AACAGAGATCTTTGCCTACATGTTCATGAGCGCATTGCTTGGGGGATTATGTGCTCAGTA TCTGTTCTTTCTGGGGTTGAGCTACACTACAGCAACACTGACTGCAACATTCTCCAACAT GACTCCGGTTTTCACCTTTTTAATTGCTATCCCTCTCCAACTGGAAACAGTTGATGTGAG GAGCAAGGCGGGGCTGGCAAAAGTCATAGGAACGCTCATGTCTGTTGGTGGCGCGACGCT ATTGGGCCTGTACAAGGGAGCTGCCTTGACTCACACAACATCGTCAGTCCAAGAGCACGG TGCAAAGGGTATTACCTCCAACAGCAGCAGCTTCAGCAAGGAGCGATGGATGCTAGGCTC GGTCTTGCTGGTTTTAAACTGCATCAGCTTCTCGTTATGGATGCTTCTGCAGGGGAAGCT CACCAAGAAATACCCTGCAGTCTTCTCCAGCACTGCATTCATGACCTCGTTCAGCTCAAT GCAAGCAGGAGTTGTTGCACTCACAACACAAAGGCGCCTTTCGGTGTGGTTGATTCGAGG AAACATACAGATCATTGCTGTTGTTTTTGCAGGAGTGGGGGTATCAGGGATAGGGTATGT GCTGATGACCTGGTGCATCGAGAAGAAGGGCCCAGTTTTCACTGCAGGCTTCATGCCTCT CATCCAGATCATGGCTGCACTCATTGATCTCTTCTTCCTTCATGAGCAGATTTTCCTTGG AAGTGCGATAGGTGCTGCTCTTGTGATTGGAGGCCTCTATCTTCTCCTCTGGGGTAAGAG CAAGGAAGCATCAGCTACTGCTTTATTGGCAAAAGCAGTGGAACAAGACGGGGAGAAAAA GGAAAATTTGGAAGCATAAAATGGGCAATTGTAGTAGTTAGTCTTTGTGGTGTAAAAGAT CATCCTAAATAACTCATTGTAGTTTTTTTTTCTTTTTTGGCAGTGCTCTCGTATGCACAT GTGCAGTGATTTGCACCAAGCACTTCTCTTCTAGATTTTGTACAACCTAAACCGAAATGG TAAATAATCGTGATTTGCCCCTGAAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)