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Oryza sativa
cluster # 459 cluster # 459       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_459#0 length = 1025 sequences # 2  

consensusID : consensus_459#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1025
fasta sequence
                              [AGGCCAAGCTAGTCGCGCGCAAATTAATCGCCGATCGATCCTACGATGAAGCGGAAGCGGCCGGCGGCGCTGCGCGGCGGGGAGGAGGCGGCGGCGGCGGCGCTGAAGCGTGGGCCGTGGACGCCCGAGGAGGACGAGGTGCTGGCGCGGTTCGTGGCGCGGGAGGGGTGCGACCGGTGGCGCACGCTGCCGCGGCGCGCGGGCCTGCTGCGCTGCGGCAAGAGCTGCCGCCTCCGGTGGATGAACTACCTCCGCCCCGACATCAAGCGCTGCCCCATCGCCGACGACGAGGAGGACCTCATCCTCCGCCTCCACCGCCTCCTCGGCAACCGGTGGTCGCTGATCGCCGGGAGGTTGCCGGGGCGCACGGACAACGAGATCAAGAACTACTGGAACTCGCATCTCAGCAAGAAGCTCATCGCGCAGGGCATCGACCCGCGGACGCACAAGCCGCTGACGGCCGCCGCCGATCACTCCAACGCCGCCGCTGCCGTCGCCGCCACTTCTTACAAGAAGGCGGTGCCGGCCAAGCCGCCGAGGACGGCATCCTCGCCGGCCGCTGGCATTGAGTGCAGCGACGATCGTGCCCGACCGGCCGACGGTGGCGGTGACTTCGCAGCGATGGTGAGCGCCGCCGATGCCGAGGGATTCGAAGGAGGATTTGGCGATCAGTTCTGTGCCGAGGATGCAGTTCATGGTGGCTTCGACATGGGTTCCGCTTCCGCCATGGTGGGTGACGACGACTTCTCCTCGTTTCTTGATTCTCTGATCAACGACGAGCAGTTAGGCGATCTCTTCGTCGTCGAGGGCAACGATCACGAGCATGGCAATGGTGAGATTGGTCATGGAGACGTCATGGAATCCAAACAGTAATCTTTCGGGAGATTGATCAGGGAATAAGTTGACCATGAGAAAACATGTAAGAACAGCTTGTCTGCTGAGTCATGACCGGTGATGTGTATGTGATGGAAGAAAACGTATGTACGACTTAATGCTTGCACCTATACTACTGCTGTGTGCATTAT]

[+] EMBL D88620               [AGGCCAAGCTAGTCGCGCGCAAATTAATCGCCGATCGATCCTACGATGAAGCGGAAGCGGCCGGCGGCGCTGCGCGGCGGGGAGGAGGCGGCGGCGGCGGCGCTGAAGCGTGGGCCGTGGACGCCCGAGGAGGACGAGGTGCTGGCGCGGTTCGTGGCGCGGGAGGGGTGCGACCGGTGGCGCACGCTGCCGCGGCGCGCGGGCCTGCTGCGCTGCGGCAAGAGCTGCCGCCTCCGGTGGATGAACTACCTCCGCCCCGACATCAAGCGCTGCCCCATCGCCGACGACGAGGAGGACCTCATCCTCCGCCTCCACCGCCTCCTCGGCAACCGGTGGTCGCTGATCGCCGGGAGGTTGCCGGGGCGCACGGACAACGAGATCAAGAACTACTGGAACTCGCATCTCAGCAAGAAGCTCATCGCGCAGGGCATCGACCCGCGGACGCACAAGCCGCTGACGGCCGCCGCCGATCACTCCAACGCCGCCGCTGCCGTCGCCGCCACTTCTTACAAGAAGGCGGTGCCGGCCAAGCCGCCGAGGACGGCATCCTCGCCGGCCGCTGGCATTGAGTGCAGCGACGATCGTGCCCGACCGGCCGACGGTGGCGGTGACTTCGCAGCGATGGTGAGCGCCGCCGATGCCGAGGGATTCGAAGGAGGATTTGGCGATCAGTTCTGTGCCGAGGATGCAGTTCATGGTGGCTTCGACATGGGTTCCGCTTCCGCCATGGTGGGTGACGACGACTTCTCCTCGTTTCTTGATTCTCTGATCAACGACGAGCAGTTAGGCGATCTCTTCGTCGTCGAGGGCAACGATCACGAGCATGGCAATGGTGAGATTGGTCATGGAGACGTCATGGAATCCAAACAGTAATCTTTCGGGAGATTGATCAGGGAATAAGTTGACCATGAGAAAACATGTAAGAACAGCTTGTCTGCTGAGTCATGACCGGTGATGTGTATGTGATGGAAGAAAACGTATGTACGACTTAATGC                              ]
[+] EMBL AK108259             [             CGCGCGCAAATTAATCGCCGATCGATCCTACGATGAAGCGGAAGCGGCCGGCGGCGCTGCGCGGCGGGGAGGAGGCGGCGGCGGCGGCGCTGAAGCGTGGGCCGTGGACGCCCGAGGAGGACGAGGTGCTGGCGCGGTTCGTGGCGCGGGAGGGGTGCGACCGGTGGCGCACGCTGCCGCGGCGCGCGGGCCTGCTGCGCTGCGGCAAGAGCTGCCGCCTCCGGTGGATGAACTACCTCCGCCCCGACATCAAGCGCTGCCCCATCGCCGACGACGAGGAGGACCTCATCCTCCGCCTCCACCGCCTCCTCGGCAACCGGTGGTCGCTGATCGCCGGGAGGTTGCCGGGGCGCACGGACAACGAGATCAAGAACTACTGGAACTCGCATCTCAGCAAGAAGCTCATCGCGCAGGGCATCGACCCGCGGACGCACAAGCCGCTGACGGCCGCCGCCGATCACTCCAACGCCGCCGCTGCCGTCGCCGCCACTTCTTACAAGAAGGCGGTGCCGGCCAAGCCGCCGAGGACGGCATCCTCGCCGGCCGCTGGCATTGAGTGCAGCGACGATCGTGCCCGACCGGCCGACGGTGGCGGTGACTTCGCAGCGATGGTGAGCGCCGCCGATGCCGAGGGATTCGAAGGAGGATTTGGCGATCAGTTCTGTGCCGAGGATGCAGTTCATGGTGGCTTCGACATGGGTTCCGCTTCCGCCATGGTGGGTGACGACGACTTCTCCTCGTTTCTTGATTCTCTGATCAACGACGAGCAGTTAGGCGATCTCTTCGTCGTCGAGGGCAACGATCACGAGCATGGCAATGGTGAGATTGGTCATGGAGACGTCATGGAATCCAAACAGTAATCTTTCGGGAGATTGATCAGGGAATAAGTTGACCATGAGAAAACATGTAAGAACAGCTTGTCTGCTGAGTCATGACCGGTGATGTGTATGTGATGGAAGAAAACGTATGTACGACTTAATGCTTGCACCTATACTACTGCTGTGTGCATTAT]


>consensus_459#0 AGGCCAAGCTAGTCGCGCGCAAATTAATCGCCGATCGATCCTACGATGAAGCGGAAGCGG CCGGCGGCGCTGCGCGGCGGGGAGGAGGCGGCGGCGGCGGCGCTGAAGCGTGGGCCGTGG ACGCCCGAGGAGGACGAGGTGCTGGCGCGGTTCGTGGCGCGGGAGGGGTGCGACCGGTGG CGCACGCTGCCGCGGCGCGCGGGCCTGCTGCGCTGCGGCAAGAGCTGCCGCCTCCGGTGG ATGAACTACCTCCGCCCCGACATCAAGCGCTGCCCCATCGCCGACGACGAGGAGGACCTC ATCCTCCGCCTCCACCGCCTCCTCGGCAACCGGTGGTCGCTGATCGCCGGGAGGTTGCCG GGGCGCACGGACAACGAGATCAAGAACTACTGGAACTCGCATCTCAGCAAGAAGCTCATC GCGCAGGGCATCGACCCGCGGACGCACAAGCCGCTGACGGCCGCCGCCGATCACTCCAAC GCCGCCGCTGCCGTCGCCGCCACTTCTTACAAGAAGGCGGTGCCGGCCAAGCCGCCGAGG ACGGCATCCTCGCCGGCCGCTGGCATTGAGTGCAGCGACGATCGTGCCCGACCGGCCGAC GGTGGCGGTGACTTCGCAGCGATGGTGAGCGCCGCCGATGCCGAGGGATTCGAAGGAGGA TTTGGCGATCAGTTCTGTGCCGAGGATGCAGTTCATGGTGGCTTCGACATGGGTTCCGCT TCCGCCATGGTGGGTGACGACGACTTCTCCTCGTTTCTTGATTCTCTGATCAACGACGAG CAGTTAGGCGATCTCTTCGTCGTCGAGGGCAACGATCACGAGCATGGCAATGGTGAGATT GGTCATGGAGACGTCATGGAATCCAAACAGTAATCTTTCGGGAGATTGATCAGGGAATAA GTTGACCATGAGAAAACATGTAAGAACAGCTTGTCTGCTGAGTCATGACCGGTGATGTGT ATGTGATGGAAGAAAACGTATGTACGACTTAATGCTTGCACCTATACTACTGCTGTGTGC ATTAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)