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Oryza sativa
cluster # 4593 cluster # 4593       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4593#0 length = 2456 sequences # 3  

consensusID : consensus_4593#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2456
fasta sequence
                              [AGTGCCGCCGGGCTCGCCGCGGGGCGGCACGCTCGAAACAGGTGGCGGCGGAGATGGAGATGGGCCTCGAACTCCAACCAGCTGCAGCGCCGTAGTCTCCTCCACTCGCGAGAAGGCAGAGGGGGAGGGGAATCGGCGGAGACCATCGCAGAGTTATTCTCCTCCCTCCTCTTGGAAGGCTGTGAAATCCTCCCTGGCGCTGCTAAGCCTCCGAGCTCCCTCCGAGCTTCCGAGCCATCTCA---AGATCTCAGTCAGTTGATTACTAGCTTTCCTTTATGACCTTGCTGCTAGCTTGTAAAAGATGAGCTCAAAATGTGGAGCTCCAAAAGTTAGAAAACCAACAATCAATTACCACCGTCTTCCATTAGATGGTCATCAGTTTGATCTGGATGCATTTCTTACTAAGGATCGTAATGCCAATAACCAATCGAAGCCAAGTACTCAGTCAGGAAGCAAATCTATAGATAGAAGATTAACCACTCCACAGTTAGTATCAGCATTGACTGGGATCTGGAATCTTGTCGGCCAGCCAGAATCTTCCGGCACAGCTCAAATATCCGAGAGCCATGAAATTCTGCATAAAGATGAACCTGTGTGCTTCAGCAAAGAGCAAAAGGAACATGCATTGATGTCTTGCTGTGCTGAAAACTCAACTGGTCTGAGCTCTCAAAACTTTTTATCAACGCCAAAATCAATCTTTGAAGATCTTAGTTTGGTGAAGAAAATGTTAATGCTCACATCATGTAGCAGCATGGCTGGTGGCTCTTCTACATGGAGACATGTGCATGTTGGGAGTGCCTATTATTTAAAGTATCAGAATATATATCCCATGCAAACCAGAATGATGCACACCTATGCTGTTTCTGGCAGTACGGAATTTAAGAAGGATCAAAGCTTTAGAAGGGACGATAACCATTCCAGCCAAACAAGAAACATGCCAACTGAGCTATGTACTAGCTCCAGTGAGGAGGCTCACATTTACGAAAGTTCTCTGCATGGTACTAAATCCAATCTAGAGATTATTCCAGAATATTGTAGTTCTTCATCTTGTTCGTCTCAGCAAATGGTGACTTGTGAAGAGACAAGGATAATGCCAGCAGACCAAATTTCGAGTAACACATGCACACTTACTGAGAACTCAGTGTGCATATCTTGTCCGGTGGGTGATGTTGTGGTTATTAATTCAGAACACACAGATCAAAATGTTGATGGTCTTATGTCTCAGGAGCACTCTGTAGACAAGTATTCACCACAGCTGGAATCATCTGTTCAACATCGATTTTATGGTGCTGTTAATCTGAACAGGCATGCTGTGGCAGGAGCATTAGCTGGCACAGTAGTCAGTGTTTCTCTGCATCCAATTGATACAGTGAAGACCATTATTCAGGTTAACAGTTCTCGACGAAGTTCATTCTACCACACGTTAAGGCGCGCCCTTGTTGAGAGAGGAGTTTTAGGACTTTATGGAGGGCTTGCTAGCAAAATTGCTTGTTCTGCACCAATTTCAGCAATCTATACCTTAACTTATGAAATAGTCAAGGGGTCTCTTCTGCCTATTTTGCCAAAGGAGTATCATTCAATTGCTCATTGCACTGCTGGTGGTTGTTCTAGCATTGCAACTTCCTTCGTTTTTACACCCAGTGAATGCATAAAACAGCAGATGCAAGTGGGTTCACAGTATCAGAATTGCTGGGATGCTTTATTAGGATGTCTTCGAAAGGGTGGCATTACTTCACTATATGCTGGATGGGGTGCTGTTCTTTGCAGAAATATCCCACATTCCGTAATTAAGTTTTACACCTACGAGAGCCTGAAGCAGTTCATGTTGAAATCAGCTCCTGCTAATGCCAATCTTGATTCTGGGCAGACACTTTTCTGTGGAGGTTTTGCTGGGTCTACTGCTGCTCTGTGTACAACTCCATTTGATGTTGTTAAGACGCGAGTACAGTTACAGGCACTCAGCCCTATTAGCAAGTATGATGGGGTTCTTCATGCGCTCAAAGAAATTTTTCAGCACGAAGGCTTGCAGGGTCTTTACAGGGGTTTGGCTCCAAGGTTGGCTATGTATATATCTCAAGGGGCTATATTTTTCACATCCTATGAGTTCCTCAAAACAATTATGTTTTCTGAACAAGAGCTTCATGCAAGGAACTTTTGATCACAGAATGATGCAGCGTGGTTCAGGAACACTTAAAGCATCTGAGTTTCAAGAACAATCTCATGAACTAAGTGGGATGGTTCTATTAGGCTAGAGGATTGTAGACTTGTGGTTACTGAACCAAACATTTCTTAGGTCTTGATAGTAAACATTTGTACAAGTGTACATTACATTTTTGGATACATAGGCAACCAAACTGGTGAGCAGCCATTTTTGAGTAGAAATCACATCTAGGAAAGCAAAATTTTGTATCATCAACACGGTTTGTAAATTCCCTTACAAGCAACCTGTGACTGGA]

[+] EMBL AK068162             [AGTGCCGCCGGGCTCGCCGCGGGGCGGCACGCTCGAAACAGGTGGCGGCGGAGATGGAGATGGGCCTCGAACTCCAACCAGCTGCAGCGCCGTAGTCTCCTCCACTCGCGAGAAGGCAGAGGGGGAGGGGAATCGGCGGAGACCATCGCAGAGTTATTCTCCTCCCTCCTCTTGGAAGGCTGTGAAATCCTCCCTGGCGCTGCTAAGCCTCCGAGCTCCCTCCGAGCTTCCGAGCCATCTCA   AGATCTCAGTCAGTTGATTACTAGCTTTCCTTTATGACCTTGCTGCTAGCTTGTAAAAGATGAGCTCAAAATGTGGAGCTCCAAAAGTTAGAAAACCAACAATCAATTACCACCGTCTTCCATTAGATGGTCATCAGTTTGATCTGGATGCATTTCTTACTAAGGATCGTAATGCCAATAACCAATCGAAGCCAAGTACTCAGTCAGGAAGCAAATCTATAGATAGAAGATTAACCACTCCACAGTTAGTATCAGCATTGACTGGGATCTGGAATCTTGTCGGCCAGCCAGAATCTTCCGGCACAGCTCAAATATCCGAGAGCCATGAAATTCTGCATAAAGATGAACCTGTGTGCTTCAGCAAAGAGCAAAAGGAACATGCATTGATGTCTTGCTGTGCTGAAAACTCAACTGGTCTGAGCTCTCAAAACTTTTTATCAACGCCAAAATCAATCTTTGAAGATCTTAGTTTGGTGAAGAAAATGTTAATGCTCACATCATGTAGCAGCATGGCTGGTGGCTCTTCTACATGGAGACATGTGCATGTTGGGAGTGCCTATTATTTAAAGTATCAGAATATATATCCCATGCAAACCAGAATGATGCACACCTATGCTGTTTCTGGCAGTACGGAATTTAAGAAGGATCAAAGCTTTAGAAGGGACGATAACCATTCCAGCCAAACAAGAAACATGCCAACTGAGCTATGTACTAGCTCCAGTGAGGAGGCTCACATTTACGAAAGTTCTCTGCATGGTACTAAATCCAATCTAGAGATTATTCCAGAATATTGTAGTTCTTCATCTTGTTCGTCTCAGCAAATGGTGACTTGTGAAGAGACAAGGATAATGCCAGCAGACCAAATTTCGAGTAACACATGCACACTTACTGAGAACTCAGTGTGCATATCTTGTCCGGTGGGTGATGTTGTGGTTATTAATTCAGAACACACAGATCAAAATGTTGATGGTCTTATGTCTCAGGAGCACTCTGTAGACAAGTATTCACCACAGCTGGAATCATCTGTTCAACATCGATTTTATGGTGCTGTTAATCTGAACAGGCATGCTGTGGCAGGAGCATTAGCTGGCACAGTAGTCAGTGTTTCTCTGCATCCAATTGATACAGTGAAGACCATTATTCAGGTTAACAGTTCTCGACGAAGTTCATTCTACCACACGTTAAGGCGCGCCCTTGTTGAGAGAGGAGTTTTAGGACTTTATGGAGGGCTTGCTAGCAAAATTGCTTGTTCTGCACCAATTTCAGCAATCTATACCTTAACTTATGAAATAGTCAAGGGGTCTCTTCTGCCTATTTTGCCAAAGGAGTATCATTCAATTGCTCATTGCACTGCTGGTGGTTGTTCTAGCATTGCAACTTCCTTCGTTTTTACACCCAGTGAATGCATAAAACAGCAGATGCAAGTGGGTTCACAGTATCAGAATTGCTGGGATGCTTTATTAGGATGTCTTCGAAAGGGTGGCATTACTTCACTATATGCTGGATGGGGTGCTGTTCTTTGCAGAAATATCCCACATTCCGTAATTAAGTTTTACACCTACGAGAGCCTGAAGCAGTTCATGTTGAAATCAGCTCCTGCTAATGCCAATCTTGATTCTGGGCAGACACTTTTCTGTGGAGGTTTTGCTGGGTCTACTGCTGCTCTGTGTACAACTCCATTTGATGTTGTTAAGACGCGAGTACAGTTACAGGCACTCAGCCCTATTAGCAAGTATGATGGGGTTCTTCATGCGCTCAAAGAAATTTTTCAGCACGAAGGCTTGCAGGGTCTTTACAGGGGTTTGGCTCCAAGGTTGGCTATGTATATATCTCAAGGGGCTATATTTTTCACATCCTATGAGTTCCTCAAAACAATTATGTTTTCTGAACAAGAGCTTCATGCAAGGAACTTTTGATCACAGAATGATGCAGCGTGGTTCAGGAACACTTAAAGCATCTGAGTTTCAAGAACAATCTCATGAACTAAGTGGGATGGTTCTATTAGGCTAGAGGATTGTAGACTTGTGGTTACTGAACCAAACATTTCTTAGGTCTTGATAGTAAACATTTGTACAAGTGTACATTACATTTTTGGATACATAGGCAACCAAACTGGTGAGCAGCCATTTTTGAGTAGAAATCACATCTAGGAAAGCAAAATTTTGTATCATCAACACGGTTTGTAAATTCCCTTACAAGCAACCTGTGACTGGA]
[+] EMBL CF306689             [             TCGCCGCGGGGCGGCACGCTCGAAACAGGTGGCGGCGGAGATGGAGATGGGCCTCGAACTCCAACCAGCTGCAGCGCCGTAGTCTCCTCCACTCGCGAGAAGGCAGAGGGGGAGGGGAATCGGCGGAGACCATCGCAGAGTTATTCTCCTCCCTCCTCTTGGAAGGCTGTGAAATCCTCCCTGGCGCTGCTAAGCCTCCGAGCTCCCTCCGAGCTTCCGAGCCATCTCAAGCAGATCTCAGTCAGTTGATTACTAGCTTTCCTTTATGACCTTGCTGCTAGCTTGTAAAAGATGAGCTCAAAATGTGGAGCTCCAAAAGTTAGAAAACCAACAATCAATTACCACCGTCTTCCATTAGATGGTCATCAGTTTGATCTGGATGCATTTCTTACTAAGGATCGTAATGCCAATAACCAATCGAAGCCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB639379             [                        CGGCACGCTCGAAACAGGTGGCGGCGGAGATGGAGATGGGCCTCGAACTCCAACCAGCTGCAGCGCCGTAGTCTCCTCCACTCGCGAGAAGGCAGAGGGGGAGGGGAATCGGCGGAGACCATCGCAGAGTTATTCTCCTCCCTCCTCTTGGAAGGCTGTGAAATCCTCCCTGGCGCTGCTAAGCCTCCGAGCTCCCTCCGAGCTTCCGAGCCATCTCA   AGATCTCAGTCAGTTGATTACTAGCTTTCCTTTATGACCTTGCTGCTAGCTTGTAAAAGATGAGCTCAAAATGTGGAGCTCCAAAAGTTAGAAAACCAACAATCAATTACCACCGTCTCCCATTAGATGGTCATCAGTTTGATCTGGATGCATTTCTTACTAAGGATCGTAATGCCAATAACCAATCGAAGCCAAGTACTCAGTCAGGAAGCAAATCTATAGATAGAAGATTAACCACTCCACAGTTAGTATCAGCATTGACTGGGATCTGGAATCTTGTCGGCCAGCCAGAATCTTCCGGCACAGCTCANATATCCGAGAGCCATGAAATTCTGCATAAAGATGAACCTGTGTGCTTCAGCAAAGAGCAn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]


>consensus_4593#0 AGTGCCGCCGGGCTCGCCGCGGGGCGGCACGCTCGAAACAGGTGGCGGCGGAGATGGAGA TGGGCCTCGAACTCCAACCAGCTGCAGCGCCGTAGTCTCCTCCACTCGCGAGAAGGCAGA GGGGGAGGGGAATCGGCGGAGACCATCGCAGAGTTATTCTCCTCCCTCCTCTTGGAAGGC TGTGAAATCCTCCCTGGCGCTGCTAAGCCTCCGAGCTCCCTCCGAGCTTCCGAGCCATCT CAAGATCTCAGTCAGTTGATTACTAGCTTTCCTTTATGACCTTGCTGCTAGCTTGTAAAA GATGAGCTCAAAATGTGGAGCTCCAAAAGTTAGAAAACCAACAATCAATTACCACCGTCT TCCATTAGATGGTCATCAGTTTGATCTGGATGCATTTCTTACTAAGGATCGTAATGCCAA TAACCAATCGAAGCCAAGTACTCAGTCAGGAAGCAAATCTATAGATAGAAGATTAACCAC TCCACAGTTAGTATCAGCATTGACTGGGATCTGGAATCTTGTCGGCCAGCCAGAATCTTC CGGCACAGCTCAAATATCCGAGAGCCATGAAATTCTGCATAAAGATGAACCTGTGTGCTT CAGCAAAGAGCAAAAGGAACATGCATTGATGTCTTGCTGTGCTGAAAACTCAACTGGTCT GAGCTCTCAAAACTTTTTATCAACGCCAAAATCAATCTTTGAAGATCTTAGTTTGGTGAA GAAAATGTTAATGCTCACATCATGTAGCAGCATGGCTGGTGGCTCTTCTACATGGAGACA TGTGCATGTTGGGAGTGCCTATTATTTAAAGTATCAGAATATATATCCCATGCAAACCAG AATGATGCACACCTATGCTGTTTCTGGCAGTACGGAATTTAAGAAGGATCAAAGCTTTAG AAGGGACGATAACCATTCCAGCCAAACAAGAAACATGCCAACTGAGCTATGTACTAGCTC CAGTGAGGAGGCTCACATTTACGAAAGTTCTCTGCATGGTACTAAATCCAATCTAGAGAT TATTCCAGAATATTGTAGTTCTTCATCTTGTTCGTCTCAGCAAATGGTGACTTGTGAAGA GACAAGGATAATGCCAGCAGACCAAATTTCGAGTAACACATGCACACTTACTGAGAACTC AGTGTGCATATCTTGTCCGGTGGGTGATGTTGTGGTTATTAATTCAGAACACACAGATCA AAATGTTGATGGTCTTATGTCTCAGGAGCACTCTGTAGACAAGTATTCACCACAGCTGGA ATCATCTGTTCAACATCGATTTTATGGTGCTGTTAATCTGAACAGGCATGCTGTGGCAGG AGCATTAGCTGGCACAGTAGTCAGTGTTTCTCTGCATCCAATTGATACAGTGAAGACCAT TATTCAGGTTAACAGTTCTCGACGAAGTTCATTCTACCACACGTTAAGGCGCGCCCTTGT TGAGAGAGGAGTTTTAGGACTTTATGGAGGGCTTGCTAGCAAAATTGCTTGTTCTGCACC AATTTCAGCAATCTATACCTTAACTTATGAAATAGTCAAGGGGTCTCTTCTGCCTATTTT GCCAAAGGAGTATCATTCAATTGCTCATTGCACTGCTGGTGGTTGTTCTAGCATTGCAAC TTCCTTCGTTTTTACACCCAGTGAATGCATAAAACAGCAGATGCAAGTGGGTTCACAGTA TCAGAATTGCTGGGATGCTTTATTAGGATGTCTTCGAAAGGGTGGCATTACTTCACTATA TGCTGGATGGGGTGCTGTTCTTTGCAGAAATATCCCACATTCCGTAATTAAGTTTTACAC CTACGAGAGCCTGAAGCAGTTCATGTTGAAATCAGCTCCTGCTAATGCCAATCTTGATTC TGGGCAGACACTTTTCTGTGGAGGTTTTGCTGGGTCTACTGCTGCTCTGTGTACAACTCC ATTTGATGTTGTTAAGACGCGAGTACAGTTACAGGCACTCAGCCCTATTAGCAAGTATGA TGGGGTTCTTCATGCGCTCAAAGAAATTTTTCAGCACGAAGGCTTGCAGGGTCTTTACAG GGGTTTGGCTCCAAGGTTGGCTATGTATATATCTCAAGGGGCTATATTTTTCACATCCTA TGAGTTCCTCAAAACAATTATGTTTTCTGAACAAGAGCTTCATGCAAGGAACTTTTGATC ACAGAATGATGCAGCGTGGTTCAGGAACACTTAAAGCATCTGAGTTTCAAGAACAATCTC ATGAACTAAGTGGGATGGTTCTATTAGGCTAGAGGATTGTAGACTTGTGGTTACTGAACC AAACATTTCTTAGGTCTTGATAGTAAACATTTGTACAAGTGTACATTACATTTTTGGATA CATAGGCAACCAAACTGGTGAGCAGCCATTTTTGAGTAGAAATCACATCTAGGAAAGCAA AATTTTGTATCATCAACACGGTTTGTAAATTCCCTTACAAGCAACCTGTGACTGGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)