Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4598 cluster # 4598       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4598#0 length = 891 sequences # 3  

consensusID : consensus_4598#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 891
fasta sequence
                              [ACTACTTCAATGGTTCTTGCCATCTGTATCTGTACTAAGACTGAGTTCCTTCAAAAGGGCTCCGGTAAGCGCAACACAACGCACGGGCTTCTCTCTGCTACACTAGCTCTCTCTCTCCTGTGCAGAGCTAAGCGGGAGGCATTAACCCCCCGCGTCACGCGCAATGGGTGAGGCAGCGGCGGACGAGCGCGGCCTCGCCGNCGCCGCCGCCGGGGAAGACGAGGAGGAGACGTCGCCGATCGAGGAGGTGCGGCTGACGGTGCCGGCCGGCGACGACACGGCGC-TGCCGGTGTGGACGTTCCGGATGTGGAGCATCGGCCTCCTCTCCTGCGCGCTCTTGAGCTTCCTCAACCAGTTCTTCTCCTACCGCACCGAGCCGCTCATCGTGACGCAGATCACGGTGCAGGTGGCGTCGCTGCCGGTGGGCCACTTCCTGGCGCGCGTGCTGCCGCGCCGCGCGTTCCGCGCCCCCGCGCTGCTCGGCGGCGGCGAGTGGAGCCTCAACCCGGGCCCCTTCAACATGAAGGAGCACGTGCTCATCTCCATCTTCGCCAACGCCGGCTGCGCCTTCGGCAACGGCAACGCCTACGCCGTCATGATCGTCGACATCATCCGCGCCTTCTACAAGCGCTCCATCTCCTTCGTCGCCGCCTGGCTCCTCATCATCACCACCCAGGTGCTTGGGTACGGGTGGGCGGGGCTGATGCGCAAGTTCGTGGTGGAGCCGGCGCACATGTGGTGGCCGGGGACGCTCGTCCAGGTCTCGCTCTTCCGGTGAGTAGCTACTAGCTCGCTTCACCTTCACTGCTCCTGCTCGCGTTCTACTTCAGTTTCTTCTCCTCTCTTTGTTAATTCTTCTCAACAGAAACGGTAGTAGGTTTTACGCTACGT]

[+] EMBL AK062910             [ACTACTTCAATGGTTCTTGCCATCTGTATCTGTACTAAGACTGAGTTCCTTCAAAAGGGCTCCGGTAAGCGCAACACAACGCACGGGCTTCTCTCTGCTACACTAGCTCTCTCTCTCCTGTGCAGAGCTAAGCGGGAGGCATTAACCCCCCGCGTCACGCGCAATGGGTGAGGCAGCGGCGGACGAGCGCGGCCTCGCCGCCGCCGCCGCCGGGGAAGACGAGGAGGAGACGTCGCCGATCGAGGAGGTGCGGCTGACGGTGCCGGCCGGCGACGACACGGCGC TGCCGGTGTGGACGTTCCGGATGTGGAGCATCGGCCTCCTCTCCTGCGCGCTCTTGAGCTTCCTCAACCAGTTCTTCTCCTACCGCACCGAGCCGCTCATCGTGACGCAGATCACGGTGCAGGTGGCGTCGCTGCCGGTGGGCCACTTCCTGGCGCGCGTGCTGCCGCGCCGCGCGTTCCGCGCCCCCGCGCTGCTCGGCGGCGGCGAGTGGAGCCTCAACCCGGGCCCCTTCAACATGAAGGAGCACGTGCTCATCTCCATCTTCGCCAACGCCGGCTGCGCCTTCGGCAACGGCAACGCCTACGCCGTCATGATCGTCGACATCATCCGCGCCTTCTACAAGCGCTCCATCTCCTTCGTCGCCGCCTGGCTCCTCATCATCACCACCCAGGTGCTTGGGTACGGGTGGGCGGGGCTGATGCGCAAGTTCGTGGTGGAGCCGGCGCACATGTGGTGGCCGGGGACGCTCGTCCAGGTCTCGCTCTTCCGGTGAGTAGCTACTAGCTCGCTTCACCTTCACTGCTCCTGCTCGCGTTCTACTTCAGTTTCTTCTCCTCTCTTTGTTAATTCTTCTCAACAGAAACGGTAGTAGGTTTTACGCTACGT]
[+] EMBL AU082146             [                                                            TCCGGTAAGCGCAACACAACGCACGGGCTTCTCTCTGCTACACTAGCTCTCTCTCTCCTGTGCAGAGCTAAGCGGGAGGCATTAACCCCCCGCGTCACGCGCAATGGGTGAGGCAGCGGCGGACGAGCGCGGCCTCGCCGNCGCCGCCGCCGGGGAAGACGAGGAGGAGACGTCGCCGATCGAGGAGGTGCGGCTGACGGTGCCGGCCGGCGACGACACGGCGC TGCCGGTGTGGACGTTCCGGATGTGGAGCATCGGCCTCCTCTCCTGCGCGCTCTTGAGCTTCCTCAACCAGTTCTTCTCCTACCGCACCGAGCCGCTCATCGTGACGCAGATCACGGTTCAAGTTGCGTCGTNGCCGGTGGG CAATTCCTtg                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU166080             [                                                            TCCGGTAAGCGCAACACAACGCACGGGCTTCTCTCTGCTACACTAGCTCTCTCTCTCCTGTGCAGAGCTAAGCGGGAGGCATTAACCCCCCGCGTCACGCGCAATGGGTGAGGCAGCGGCGGACGAGCGCGGCCTCGCCGACGCCGCCGCCGGGGAAGACGAGGAGGAGACGTCGCCGATCGAGGAGGTGCGGCTGACGGTGCCGGCCGGCGACGACACGGCGCTTGCCGGTGTGGACGTTCCGGATGTGGAGCATCGGCCTCCTCTCCTGCGCGCTCTTGAGCTTCCTCAACCAATTCTTTTTCTAACGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]


>consensus_4598#0 ACTACTTCAATGGTTCTTGCCATCTGTATCTGTACTAAGACTGAGTTCCTTCAAAAGGGC TCCGGTAAGCGCAACACAACGCACGGGCTTCTCTCTGCTACACTAGCTCTCTCTCTCCTG TGCAGAGCTAAGCGGGAGGCATTAACCCCCCGCGTCACGCGCAATGGGTGAGGCAGCGGC GGACGAGCGCGGCCTCGCCGNCGCCGCCGCCGGGGAAGACGAGGAGGAGACGTCGCCGAT CGAGGAGGTGCGGCTGACGGTGCCGGCCGGCGACGACACGGCGCTGCCGGTGTGGACGTT CCGGATGTGGAGCATCGGCCTCCTCTCCTGCGCGCTCTTGAGCTTCCTCAACCAGTTCTT CTCCTACCGCACCGAGCCGCTCATCGTGACGCAGATCACGGTGCAGGTGGCGTCGCTGCC GGTGGGCCACTTCCTGGCGCGCGTGCTGCCGCGCCGCGCGTTCCGCGCCCCCGCGCTGCT CGGCGGCGGCGAGTGGAGCCTCAACCCGGGCCCCTTCAACATGAAGGAGCACGTGCTCAT CTCCATCTTCGCCAACGCCGGCTGCGCCTTCGGCAACGGCAACGCCTACGCCGTCATGAT CGTCGACATCATCCGCGCCTTCTACAAGCGCTCCATCTCCTTCGTCGCCGCCTGGCTCCT CATCATCACCACCCAGGTGCTTGGGTACGGGTGGGCGGGGCTGATGCGCAAGTTCGTGGT GGAGCCGGCGCACATGTGGTGGCCGGGGACGCTCGTCCAGGTCTCGCTCTTCCGGTGAGT AGCTACTAGCTCGCTTCACCTTCACTGCTCCTGCTCGCGTTCTACTTCAGTTTCTTCTCC TCTCTTTGTTAATTCTTCTCAACAGAAACGGTAGTAGGTTTTACGCTACGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)