cluster # 4603

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Oryza sativa
cluster # 4603 cluster # 4603 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4603#0 length = 887 sequences # 3

consensusID : consensus_4603#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 887
fasta sequence

                              [AAGAAGTGCTCCTTTACTATGATTAATATTTCAATTAAAACATAAGCACTTAACTATTATGTTTCCCTGTTTACATGGGGATTAAACACAACACTGATCACGGGCACACCTAATCTAAACTTTACAACGTTTTCATCTACATTTTTGTACGCTTTCTGGGCATAAAAAACAAGCGAAAGCGAACTGATAGGCAGACACCCCCAGACTGAATACACCAACGCTCTGAAAAACGGAAGAAAACGCCCGTAAAAATACATGAAGCAAACCAAGCCGCGTTAAGGCCACAGAAACAAAAGAAATCTCGATCAGAAATCAAGCAACGCCTCTCGATCAGAAACATCAAGCAACGTGAATCAACAAGTGCTGAAGACCCAAATCTTGCATGCTTGTTGGCTTGCTGTTCCAAAGATGTGCAAAAAATGCGAACGTTGCATCCTTTTTTCTATGATGATACTCACACCTGGTGAATGTACATGCTATCTACGTTTCAC-AGAGTTTAC-TCCTCTAAC-AGCTTTAATCTGCTGTGATTCTCTAAAGCAGACAAAATGCACCAACGTCTGCCCATTTGGATAAATAGCAAAAGCACTATTTGCAATCCGCTTATGACAAAGAGAACACATGCTATCTCCATCAATCTTCAGAACAGCTTGACGCCGTTTATACAGATCCTCCTTTACCTGCAAATTTGCCCGAAAAATCAAGTTCTTGATAACCATATAATTGCGTCGATGTTCACTAGAGTTCCGCAGAAGTGGTTCAAGAAATAACACCAGATCCTGGAGTTTCGTGTCTCTAGGTAACAAACGAAGAGCTTGGGCACCATTTATTCTATCCCACCGTTGGCTTAACAATTTCAGTGCTTCATTCAACATTATTGGGGCTCCATC]

[+] EMBL CB638324             [AAGAAGTGCTCCTTTACTATGATTAATATTTCAATTAAAACATAAGCACTTAACTATTATGTTTCCCTGTTTACATGGGGATTAAACACAACACTGATCACGGGCACACCTAATCTAAACTTTACAACGTTTTCATCTACATTTTTGTACGCTTTCTGGGCATAAAAAACAAGCGAAAGCGAACTGATAGGCAGACACCCCCAGACTGAATACACCAACGCTCTGAAAAACGGAAGAAAACGCCCGTAAAAATACATGAAGCAAACCAAGCCGCGTTAAGGCCACAGAAACAAAAGAAATCTCGATCAGAAATCAAGCAACGCCTCTCGATCAGAAACATCAAGCAACGTGAATCAACAAGTGCTGAAGACCCAAATCTTGCATGCTTGTTGGCTTGCTGTTCCAAAGATGTGCAAAAAATGCGAACGTTGCATCCTTTTTTCTATGATGATACTCACACCTGGTGAATGTACATGCTATCTACGTTTCAC AGAGTTTAC TCCTCTAAC AGCTTTAATCTGCTGTGATTCTCTAAAGCAGACAAAATGCACCAACGTCTGC                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB633114             [                                 ATTAAAACATAAGCACTTAGCTATTATGTTTCCCTGTTTACATGGTGATTAAACACAACACTGATCACGGTCACACCTAATCTAAACTTTACAACGTTTTCATCTACATTTTTGTACGCTTTCTGGGCATAAAAAACAAGCGAAAGCGAACTGATAGGCAGACACGCGCAGACTGAATACACCAACGCTCTGAAGAGCGGAAGAAAACGCCAGTAAAAATACATGAAGCAAACCAAGACGCGTAAAGGCAACAGAAACAAAAGAAATCTCGATCAGAAATCAAGCAACGCCTCTCGATCAGAAACATCAAGCAACGTGAATGAGCAAGTGCTGAGGACCCAAATCTTGCATGCTTGTTGGCTTGCTGTTCCAAAGATGTGCAGAAAATGCGAACGTTGCATCCTTTTTTCTATGATGATACTCACACCTGGTGAATGTACATGCTATCTACGTTTCAC AGAGTTTAC TCCTCTAAC AGCTTTAATCTGCTGTGATTCTCTAAAGCAGACAAAATGCACCAACGTCTGCCCATTTGGATAAATAGCAAAAGCACTATTTGCAATCCGCTTATGACAAAGAGAACACATGCTATCTCCATCAATCTTCAGAACAGCTTGACGCCGTTTATACAGATCCTCCTTTACCTGCAAATTTGCCCGAAAAATCAAGTTCTTGATAACCATATAATTGCGTCGATGTTCACTAGAGTTCCGCAGAAGTGGTTCAAGAAATAACACCAGATCCTGGAGTTTCGTGTCTCTAGGTAACAAACGAAGAGCTTGGGCACCATTTATTCTATCCCACCGTTGGCTTAACAATTTCAGTGCTTCATTCAACATTATTGGGGCTCCAT ]
[-] EMBL BI118662             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TACGTTTCACAAGAGTTTACTTCCTCTAACAAGCTTTAATCTGCTGTGATTCTCTAAAGCAGACAAAATGCACCAACGTCTG CCATTTGGATAAATAGCAAAAGCACTATTTGCAATCCGCTTATGACAAAGAGAACACATGCTATCTCCATCAATCTTCAGAACAGCTTGACGCCGTTTATACAGATCCTCCTTTACCTGCAAATTTGCCCGAAAAATCAAGTTCTTGATAACCATATAATTGCGTCGATGTTCACTAGAGTTCCGCAGAAGTGGTTCAAGAAATAACACCAGATCCTGGAGTTTCGTGTCTCTAGGTAACAAACGAAGAGCTTGGGCACCATTTATTCTATCCCACCGTTGGCTTAACAATTCAAGTGCTTCATTCAACATTATTGGGCCTCCATC]




>consensus_4603#0
AAGAAGTGCTCCTTTACTATGATTAATATTTCAATTAAAACATAAGCACTTAACTATTAT
GTTTCCCTGTTTACATGGGGATTAAACACAACACTGATCACGGGCACACCTAATCTAAAC
TTTACAACGTTTTCATCTACATTTTTGTACGCTTTCTGGGCATAAAAAACAAGCGAAAGC
GAACTGATAGGCAGACACCCCCAGACTGAATACACCAACGCTCTGAAAAACGGAAGAAAA
CGCCCGTAAAAATACATGAAGCAAACCAAGCCGCGTTAAGGCCACAGAAACAAAAGAAAT
CTCGATCAGAAATCAAGCAACGCCTCTCGATCAGAAACATCAAGCAACGTGAATCAACAA
GTGCTGAAGACCCAAATCTTGCATGCTTGTTGGCTTGCTGTTCCAAAGATGTGCAAAAAA
TGCGAACGTTGCATCCTTTTTTCTATGATGATACTCACACCTGGTGAATGTACATGCTAT
CTACGTTTCACAGAGTTTACTCCTCTAACAGCTTTAATCTGCTGTGATTCTCTAAAGCAG
ACAAAATGCACCAACGTCTGCCCATTTGGATAAATAGCAAAAGCACTATTTGCAATCCGC
TTATGACAAAGAGAACACATGCTATCTCCATCAATCTTCAGAACAGCTTGACGCCGTTTA
TACAGATCCTCCTTTACCTGCAAATTTGCCCGAAAAATCAAGTTCTTGATAACCATATAA
TTGCGTCGATGTTCACTAGAGTTCCGCAGAAGTGGTTCAAGAAATAACACCAGATCCTGG
AGTTTCGTGTCTCTAGGTAACAAACGAAGAGCTTGGGCACCATTTATTCTATCCCACCGT
TGGCTTAACAATTTCAGTGCTTCATTCAACATTATTGGGGCTCCATC

clustalw multiple alignements is not computed in this case